prot_C-linearis_contig97.17060.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig97.17060.1
Unique Name	prot_C-linearis_contig97.17060.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	190

Homology

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: A0A6H5K718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K718_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 3.400e-54
Identity = 94/149 (63.09%), Postives = 117/149 (78.52%), Query Frame = 0

Query:   46 LMSMQWHQATRVEVRFRGHKGDQTQRGSSVTRVRDVAVGARSQIGAGGGAVALLVELMSCHIALPGSAPLCSYR----KKGRMLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTR 190
            L  + WH+AT V VRFRGHKGDQ+++G+ VTRVR+VA GA SQIGAGGGAVA+LVELM+CH+ALP  APLCS+R    K  ++ GY +AL A  QI+E AG +PK  GLHSLRIG AT +AAGG +PDR+++ EGRWK+ SG+ K YTR
Sbjct:  126 LAQLHWHKATGVRVRFRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYSKALSA--QIVEKAGGNPKQVGLHSLRIGAATTLAAGGDVPDRIIQGEGRWKEGSGTFKIYTR 272

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: A0A6H5KTP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP7_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 6.300e-53
Identity = 95/149 (63.76%), Postives = 118/149 (79.19%), Query Frame = 0

Query:   46 LMSMQWHQATRVEVRFRGHKGDQTQRGSSVTRVRDVAVGARSQIGAGGGAVALLVELMSCHIALPGSAPLCSYR----KKGRMLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTR 190
            L  + WH+AT V VRFRGHKGDQ+++G+ VTRVR+VA GA SQIGAGGGAVA+LVELM+CH+ALP  APLCS+R    K  ++ GY +AL A RQI++ AG DPK  GLHSLRIG AT +AAGG +PDR+++ EGRWK+ SG+ K YTR
Sbjct:  743 LAQLHWHKATGVRVRFRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYPKALSALRQIVDKAGGDPKQVGLHSLRIGAATTLAAGGDVPDRIIQSEGRWKEASGTFKIYTR 891

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: A0A6H5KCI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI7_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 3.030e-42
Identity = 92/173 (53.18%), Postives = 114/173 (65.90%), Query Frame = 0

Query:   23 FGNSPGAL----LTTRRRRLFDREGRELMSMQWHQATRVEVRFRGHKGDQTQRGSSVTRVRDVAVGARSQIGAGGGAVALLVELMSCHIALPGSAPLCSYR--KKGRMLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYT 189
            F NS G +      TRR   F R  R+L  M W QA RVE+RFRGHKGDQ Q G    R RD   G RS   A GGAVAL+V  +SCH  LP SAPL SYR  ++ ++L Y +AL+A R+I+E +G +PK F LHSLRIGGA+ +AAGG + +RV++REGRWK  S + K YT
Sbjct:  255 FANSSGVVHPVHCLTRRDVAFFRGSRQLEYMHWQQADRVEIRFRGHKGDQGQIGDVRARTRDEVHGPRSGYRANGGAVALMVASLSCHATLPDSAPLSSYRSGQEVKVLKYDQALRALREIVERSGRNPKDFALHSLRIGGASTLAAGGAVSERVIQREGRWK--SDAYKVYT 425

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: A0A6H5JL16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL16_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 7.030e-27
Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 0

Query:  103 MSCHIALPGSAPLCSYR----KKGRMLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTR 190
            M+CH+ALP  APLCS R    K  ++ GY +AL A RQI+E AG DPK  GLHSLRIG  T +AAGG +PDR  +REGRWK+ S +LK  TR
Sbjct:    1 MACHLALPEDAPLCSCRCRRSKTIKVWGYSKALSALRQIVEEAGGDPKQVGLHSLRIGATTTLAAGGDVPDRTTQREGRWKEGSNTLKICTR 92

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: A0A6H5K297_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K297_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 6.880e-12
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 0

Query:   99 LVELMSCHIALPGSAPLCSY---RKKGRMLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKS 182
            +VEL+S +  LP  APL ++   + +  M    +A  A RQ++ LAG  P+ + LHSLRIGGAT +AAGG  P+ V+ REGRW  +S
Sbjct:    1 MVELLSLYTFLPSHAPLVAFGVGQGQWAMWTKCQATVALRQVVALAGLQPEEYALHSLRIGGATFLAAGGASPE-VLRREGRWSGES 86

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: A0A6H5K3G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3G1_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 9.460e-10
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 0

Query:   53 QATRVEVRFRGHKGDQTQRGSSVTRVRDVAVGARSQIGAGGGAVALLVELMSCHIALPGSAPLCSYRK-KGRMLGY--RRALKAFRQIIELAG 142
            +A RVEVRFR  KGDQ ++G+  TR R    G    +  GGGAV +++EL+SC   LP SAPL ++   +GR   +  R A +A RQ++ LAG
Sbjct:  237 EADRVEVRFRSSKGDQFRKGAVCTRARP---GPPQSVECGGGAVDVMIELLSCFPVLPSSAPLVAFGTGEGRWSVWTRRHATEALRQVVSLAG 326

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: A0A835YIV1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIV1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.120e-7
Identity = 49/149 (32.89%), Postives = 74/149 (49.66%), Query Frame = 0

Query:   39 FDREGRELMSMQWHQATRVEVRFRGHKGDQTQRGSSVTRVRDVAVGARSQIGAGGGAVALLVELMSCHIA-LPGSA----PLCSYRKKGRMLGYRRALKAFRQIIELA---GDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWK 179
            F R+GR L +   H A       RG K DQ            + VG+ + + A GG +A  V + +  +A LP +A    PL S   +   +G  +  +A   I  LA   G DP+ +G HS+R+GGAT +A  G +P R+++  GRW+
Sbjct:   40 FRRQGRPLPAAAGHTADEARFIIRGSKTDQ------------LRVGSTAVLTAAGGGLADPVRIFADVVAALPAAATAQHPLMSVATRAGGIGALKRREAELLIRSLAMRQGLDPRQYGTHSMRVGGATTLAHAG-VPGRLIQAAGRWR 175

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: A0A6H5L0Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q9_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 2.070e-7
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0

Query:   99 LVELMSCHIALPGSAPLCSY---RKKGRMLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRV 171
            +VEL+S +  LP  APL ++   + +  M    +A  A RQ++ LAG  P+ + LHSLRIGGAT +AA G  P+ V
Sbjct:    1 MVELLSLYTFLPSHAPLVAFGVGQGQWAMWTKCQATVALRQVVALAGLQPEEYALHSLRIGGATFLAAEGASPEGV 76

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: UPI0018D9EF2A (uncharacterized protein LOC119719490 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9EF2A)

HSP 1 Score: 60.1 bits (144), Expect = 2.130e-7
Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 0

Query:  118 YRKKGRMLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKS 182
            Y+ +   L Y R L  F+  +   G +PK FGLHSLR GGATA A  G +PDR+ ++ GRW+ ++
Sbjct:  226 YKLRSGQLSYSRCLDIFKSALSSVGVNPKRFGLHSLRAGGATAAARIG-VPDRLFKKHGRWRSET 289

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BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Match: UPI001CF49A65 (uncharacterized protein LOC122961068 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF49A65)

HSP 1 Score: 60.1 bits (144), Expect = 2.270e-7
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0

Query:  120 KKGRMLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWK 179
            + G  L Y RA + F    +  G D KL+GLHSLRIGGA+A AA   +PDRV+++ GRWK
Sbjct:  245 RSGSRLSYSRARELFILKFKAIGLDTKLYGLHSLRIGGASA-AANNDLPDRVIKKHGRWK 303

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot

BLAST of mRNA_C-linearis_contig97.17060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21


Match Name	E-value	Identity	Description
A0A6H5K718_9PHAE	3.400e-54	63.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KTP7_9PHAE	6.300e-53	63.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCI7_9PHAE	3.030e-42	53.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JL16_9PHAE	7.030e-27	58.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K297_9PHAE	6.880e-12	45.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3G1_9PHAE	9.460e-10	45.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YIV1_9STRA	1.120e-7	32.89	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A6H5L0Q9_9PHAE	2.070e-7	43.42	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
UPI0018D9EF2A	2.130e-7	44.62	uncharacterized protein LOC119719490 n=1 Tax=Patir...	[more]
UPI001CF49A65	2.270e-7	51.67	uncharacterized protein LOC122961068 n=1 Tax=Acrop...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013762	Integrase-like, catalytic domain superfamily	GENE3D	1.10.443.10		coord: 43..190 e-value: 4.3E-11 score: 45.0
IPR011010	DNA breaking-rejoining enzyme, catalytic core	SUPERFAMILY	56349	DNA breaking-rejoining enzymes	coord: 45..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig97	contig	C-linearis_contig97:4110..4692 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig97.17060.1	mRNA_C-linearis_contig97.17060.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig97 4110..5099 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig97.17060.1 ID=prot_C-linearis_contig97.17060.1|Name=mRNA_C-linearis_contig97.17060.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=190bp
MAVSGSVLSSVGSIRRNFCFVGFGNSPGALLTTRRRRLFDREGRELMSMQ
WHQATRVEVRFRGHKGDQTQRGSSVTRVRDVAVGARSQIGAGGGAVALLV
ELMSCHIALPGSAPLCSYRKKGRMLGYRRALKAFRQIIELAGDDPKLFGL
HSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013762	Integrase-like_cat_sf
IPR011010	DNA_brk_join_enz