prot_C-linearis_contig96.17049.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17049.1
Unique Nameprot_C-linearis_contig96.17049.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length97
Homology
BLAST of mRNA_C-linearis_contig96.17049.1 vs. uniprot
Match: D7G4B2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B2_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.060e-21
Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 SGVTPLHRAAEVNSCQVAQVLINAEASVNARTAWGWYAPLHFALQ 45
            SGVTPLHRAAEVNSCQVAQVLINA+ASVN RT+WGWYAPLHFAL+
Sbjct:    9 SGVTPLHRAAEVNSCQVAQVLINADASVNVRTSWGWYAPLHFALK 53          
BLAST of mRNA_C-linearis_contig96.17049.1 vs. uniprot
Match: A0A7S4A937_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A937_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.210e-9
Identity = 36/97 (37.11%), Postives = 52/97 (53.61%), Query Frame = 0
Query:    1 SGVTPLHRAAEVNSCQVAQVLINAEASVNARTAWGWYAPLHFALQNGHEQVAEVLLQAGAKWT--------ILTKRLRTPYDLAVSRGLKLQALRIQ 89
            SG+T LHRAA+V   ++ + L+   A  +A+T  G   PLH A+  GHE+ A  LL+ GA W          +  R  TP   AV +G +L A R++
Sbjct:   34 SGMTLLHRAADVAQVEIIKYLMELGADASAKTFRGGDTPLHLAVSAGHEKAAMALLEGGAPWVPSKQKPKMAVNNRGETPMRTAVRKGYQLMAQRLE 130          
BLAST of mRNA_C-linearis_contig96.17049.1 vs. uniprot
Match: T0Q147_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q147_SAPDV)

HSP 1 Score: 57.0 bits (136), Expect = 4.050e-8
Identity = 36/91 (39.56%), Postives = 41/91 (45.05%), Query Frame = 0
Query:    1 SGVTPLHRAAEVNSCQVAQVLINAEASVNARTAWGWYAPLHFALQNGHEQVAEVLLQAGAKWTILTKRLRTPYDLAVSRGLKLQALRIQDV 91
            SGV+ LHRA E    +  + LI   A VNAR AWGWYA                 L AGA W+   K   TP+  AV  G    A RI  V
Sbjct:   33 SGVSALHRACEGGHLESIKFLIAQGADVNARAAWGWYAXXXXXXXXXXXXXXXXXLDAGANWSQPDKYRATPHKYAVRAGHATMAHRIDAV 123          
BLAST of mRNA_C-linearis_contig96.17049.1 vs. uniprot
Match: C1C0P9_CALCM (Dysferlin-interacting protein 1 n=4 Tax=Caligidae TaxID=72034 RepID=C1C0P9_CALCM)

HSP 1 Score: 51.2 bits (121), Expect = 7.460e-6
Identity = 30/86 (34.88%), Postives = 46/86 (53.49%), Query Frame = 0
Query:    1 SGVTPLHRAAEVNSCQVAQVLINAEASVNARTAWGWYAPLHFALQNGHEQVAEVLLQAGAKWTILTKRLRTPYDLAVSRGLKLQAL 86
            +G+T LH+A   N+  V ++L+N  + +N + A  W  PLH A  NG   ++   L  GA+ +ILT R   P DL      K+ A+
Sbjct:   57 AGLTALHQAVLDNNLPVVKILLNHGSKINMQDADSW-TPLHAACANGLYDISXXXLDRGARTSILTDRKERPIDLVDPGDSKMLAV 141          
BLAST of mRNA_C-linearis_contig96.17049.1 vs. uniprot
Match: A0A8K1CK32_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK32_PYTOL)

HSP 1 Score: 52.4 bits (124), Expect = 1.040e-5
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    4 TPLHRAAEVNSCQVAQVLINAEASVNARTAWGWYAPLHFALQNGHEQVAEVLLQAGAKWTILT 66
            T LH AAE     +A++LINA A VNAR A GW APLH A  +GH +V ++L+++ A    LT
Sbjct:  312 TALHLAAENGDEDIAELLINAGALVNARNAAGW-APLHIAALDGHLRVVQLLVRSRADIDSLT 373          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4B2_ECTSI2.060e-2191.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4A937_9STRA1.210e-937.11Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
T0Q147_SAPDV4.050e-839.56Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
C1C0P9_CALCM7.460e-634.88Dysferlin-interacting protein 1 n=4 Tax=Caligidae ... [more]
A0A8K1CK32_PYTOL1.040e-549.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1..30
e-value: 0.037
score: 23.2
coord: 35..64
e-value: 0.31
score: 20.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..33
score: 11.194
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 35..67
score: 10.152
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..88
e-value: 4.2E-21
score: 77.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..81
NoneNo IPR availablePFAMPF13637Ank_4coord: 4..56
e-value: 2.7E-8
score: 34.2
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 4..80
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..80
score: 21.004

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:500855..501737 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17049.1mRNA_C-linearis_contig96.17049.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 500855..501737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17049.1 ID=prot_C-linearis_contig96.17049.1|Name=mRNA_C-linearis_contig96.17049.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=97bp
SGVTPLHRAAEVNSCQVAQVLINAEASVNARTAWGWYAPLHFALQNGHEQ
VAEVLLQAGAKWTILTKRLRTPYDLAVSRGLKLQALRIQDVRHSIAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom