prot_C-linearis_contig96.17047.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17047.1
Unique Nameprot_C-linearis_contig96.17047.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length272
Homology
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BLAST of mRNA_C-linearis_contig96.17047.1 vs. uniprot
Match: D7FH19_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH19_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 8.050e-81
Identity = 147/202 (72.77%), Postives = 170/202 (84.16%), Query Frame = 0 
Query:   60 LAEAARCIEAQTPWYETL---YEEVADGGGDLAVDTILTFSVMSSLIEATNETVLAPVFVALKGLLGAVQGAAAAREEIVELIRYCVGISRCLLEAAKVEHMPRSIVVSLEEFKGEIEAMERFV--YGTRPSGCC-RRMVLSSYDRDTAAGHKRKLKGLLDAVLAGLAVQTNQAINELEDMIRARDPPPLAAMALIPREAPI 255
            LAEAAR +EA+TPW+E L   Y++VADGGGDL V+TIL F+V S LI A NETVLAPVFV LKGLLGAVQGAAAAREEIVEL RYCV +SRCLL+AAK + MP +I  +LEEFKGE+EA+ RFV  YGTR SGCC RRMVL+++DRDTAAGHKRKLK LLDAVLAGLA QTNQ +N+++ MI ARDPP L A+A IPREAP+
Sbjct:   40 LAEAARRMEAETPWFEKLGLRYQDVADGGGDLTVETILAFNVASGLINAANETVLAPVFVVLKGLLGAVQGAAAAREEIVELARYCVAMSRCLLDAAKADVMPETIKSTLEEFKGEMEAVGRFVQTYGTRSSGCCWRRMVLNAHDRDTAAGHKRKLKDLLDAVLAGLAAQTNQGLNQIKGMILARDPPSLGALAEIPREAPV 241
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH19_ECTSI8.050e-8172.77NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:494389..496528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17047.1mRNA_C-linearis_contig96.17047.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 493989..496687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17047.1 ID=prot_C-linearis_contig96.17047.1|Name=mRNA_C-linearis_contig96.17047.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=272bp
MPHSSAAAASPAPAATVGQRSSQQQCWLKQQPVEERRSVRRARRGTSPTG
MAFTTILRLLAEAARCIEAQTPWYETLYEEVADGGGDLAVDTILTFSVMS
SLIEATNETVLAPVFVALKGLLGAVQGAAAAREEIVELIRYCVGISRCLL
EAAKVEHMPRSIVVSLEEFKGEIEAMERFVYGTRPSGCCRRMVLSSYDRD
TAAGHKRKLKGLLDAVLAGLAVQTNQAINELEDMIRARDPPPLAAMALIP
REAPISCPRPTCKGPECLREW*
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