prot_C-linearis_contig96.17042.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17042.1
Unique Nameprot_C-linearis_contig96.17042.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length36
Homology
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BLAST of mRNA_C-linearis_contig96.17042.1 vs. uniprot
Match: D7G4C0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4C0_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.270e-12
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    1 MGPCMEDLTYKSTERLLFGPSLQTSLAPVCSPAALK 36
            MGPCMEDLTYKSTERLLF PSL+TS APVC  AAL+
Sbjct:    1 MGPCMEDLTYKSTERLLFDPSLRTSHAPVCHRAALE 36
[Close]
BLAST of mRNA_C-linearis_contig96.17042.1 vs. uniprot
Match: D7G4A4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A4_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.460e-11
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 0 
Query:    1 MGPCMEDLTYKSTERLLFGPSLQTSLAPVCSPAALK 36
            MGPCMEDLTYKSTERLLFGPSL+TS APVC  AAL+
Sbjct:  161 MGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAALE 196
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4C0_ECTSI1.270e-1283.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4A4_ECTSI1.460e-1186.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:441279..441826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17042.1mRNA_C-linearis_contig96.17042.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 441279..441826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17042.1 ID=prot_C-linearis_contig96.17042.1|Name=mRNA_C-linearis_contig96.17042.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=36bp
MGPCMEDLTYKSTERLLFGPSLQTSLAPVCSPAALK
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