prot_C-linearis_contig96.17033.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17033.1
Unique Nameprot_C-linearis_contig96.17033.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length96
Homology
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BLAST of mRNA_C-linearis_contig96.17033.1 vs. uniprot
Match: D7G484_ECTSI (Lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G484_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 4.150e-41
Identity = 75/97 (77.32%), Postives = 80/97 (82.47%), Query Frame = 0 
Query:    1 WVATKLA-QGHRSPIRRPARATMEWSKATHEMARLRLWETLRGEVGCVLQRGPSFAWLSQAIGTSKRGRRRLGDLSVPVLVFEAVLDRLVRSDGIER 96
            WV TKL  QGHRSPIRRPARATMEWS+ TH+  RLRLWETLRG VGCVLQRGPSFAWLS+++  SKR R RL  LSVPVLV EA LD LVRSDGI R
Sbjct:  265 WVVTKLGRQGHRSPIRRPARATMEWSRVTHDKERLRLWETLRGTVGCVLQRGPSFAWLSKSVLASKRARGRLHQLSVPVLVLEAGLDHLVRSDGIAR 361
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BLAST of mRNA_C-linearis_contig96.17033.1 vs. uniprot
Match: A0A6H5KMI3_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI3_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.000e-31
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0 
Query:    1 WVATKLA-QGHRSPIRRPARATMEWSKATHEMARLRLWETLRGEVGCVLQRGPSFAWLSQAIGTSKRGRRRLGDLSV 76
            WV TKL  QGHRSPIRRPARA+MEWS+ TH+  RLRLWETLRG VGCVLQRGPSFAWLS+++  SKR R RL  LSV
Sbjct:  115 WVVTKLGRQGHRSPIRRPARASMEWSRVTHDKERLRLWETLRGIVGCVLQRGPSFAWLSKSVVASKRARGRLHQLSV 191
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G484_ECTSI4.150e-4177.32Lysophospholipase l2 pldb, hydrolase of alpha/beta... [more]
A0A6H5KMI3_9PHAE2.000e-3175.32Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:196156..197621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17033.1mRNA_C-linearis_contig96.17033.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 196156..197623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17033.1 ID=prot_C-linearis_contig96.17033.1|Name=mRNA_C-linearis_contig96.17033.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=96bp
WVATKLAQGHRSPIRRPARATMEWSKATHEMARLRLWETLRGEVGCVLQR
GPSFAWLSQAIGTSKRGRRRLGDLSVPVLVFEAVLDRLVRSDGIER
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