prot_C-linearis_contig96.17027.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17027.1
Unique Nameprot_C-linearis_contig96.17027.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length926
Homology
BLAST of mRNA_C-linearis_contig96.17027.1 vs. uniprot
Match: A0A6H5JIG6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG6_9PHAE)

HSP 1 Score: 629 bits (1623), Expect = 1.180e-209
Identity = 434/925 (46.92%), Postives = 531/925 (57.41%), Query Frame = 0
Query:   24 LSSSRRRPNNEVAV--------------KEVIDLS-TSSPEPCSTSTGIFAGAKLSDFTIGDRLGATRDGGEGFQGCNSRVFRATLGRRTQADFGNLPGDTAEGEKETSQGARPASMAPP-VPSAAPGRASEGGHYDGTPGRQRR---SVVGDIMDLGEQVWKGSFGACFSGNYGGALEGDGRAREAPRSVKPRDGRGGTEWAIKMALTYAGQDPQQAAQDMETEIAILVGQRLSPHANIMRGVHSFQDEIGTDLQPILWDGLGPEAGQTLSSRTFFVVMPLYPAGSLQALLNKRRIRCRGPPFLRLLDTMRFVEQMLSAVSHLLAHGVAHNDIKPDNWLLCADQQALVLTDFGAAVDAL---RPKRRMSSSSPAALIPQSGAAAATNATGPREATFASLTSGPCQHTGAASSDAAVAAXXXXGDRDGAAXXXXGEAGKSGDAKKETVPAPTTARYQPDAKRFFSVTGRFG-----RFGLTGTSSSIEGDGDGDVSAASPPRKRRRHCGDQEIGGGRVDLQGRDKPEVSSTR----LSDQLSDQLLVPFSKYCVTGTPSILAPELARAWREEKDLDFRLSDVFSVGVCMYRMLRPDSVNIDNGTGLEEKGPLEKIEGRFGQHAWPLPLFPENKGGCPYEVAQLCRGLLQPDPVQRQGASEGQSIVSWFVSRLETADTR--DANPTVAAASDSDATSRSGSNNVGPPMTSGGAGDASMQPASVSGGDNTYGALAGKRGRDG----------------SAKASVD-MTAPPIPLGSTREFEYRGRDDITLSENARQGRSGRGVCPERASSCLDTAMSRAPREEERRFEEPDELVRSDRISHMREFFASAAPDDLFQALDSKGWDVTAACAIFDGGKSGERGGPAAGKPTLGLDRACMPGDSEARASTEGGPLMLWFDGVAEELKGRR 898
            LS++RR P+ ++A                EVIDL+ T+ P   ST+T  F   KL DF IGDRLGATRDGG+GFQG NSRVFR  L  R          D A   +     A P+S+A P +PS               P        S+V D+M + EQ+ KGSFGAC SGNYG   +G   A+ +    K  D    TEWA+KM LT A +DP QA ++M+TEI +LVG R+ PH NIMRGVHSFQD IG +LQP LWDGL P AG TLS  T F+VMPL+ AGSLQALLNKRR+RC+GPPFLRLL+TMRF++QMLSA+SHLLAHGVAHNDIKPDNWLLCADQ+ LVLTDFGA  D+    +P+ + SSSSPA  +P  GA+AA +AT   +       S PC+ +GA  S A    XXXX      +         SG    E +    T R +P     F  +  FG       G++   S   G     V      ++RR    DQE          RDK  + S       + ++SD++++PFS YCV G P+ILAPELARAW EE  L+F  SDVFSVG+CMYRMLRPDSV IDNGTGLE K PLEK +G   Q AWPLP+FPENKGGCP+EV+QLCRGLL  DP +R  A EGQSI S +VSRLE AD +  DA     +AS S   SR       P  T  G G+   +       DN   ALA K  R G                 + ++VD M  PP P G       R RD + L   A +    RG   E A+S    A  R+  EE +   E DELV+SDRIS MRE FA+AAPD+LF+ALD++ WDV AACA+F    SG+       +P L + RA  PG S A  S  G    L+F GVA+EL+G R
Sbjct:    3 LSAARRPPSLDLAAYNQGVTPNEAQRQDNEVIDLTCTTPPHEVSTATD-FRDVKLQDFHIGDRLGATRDGGKGFQGVNSRVFRVRLRSRRH--------DHASRGRADGANAHPSSVASPSLPSXXXXXXXXXXXXXXXPSSTSPPSGSLVKDLMGMCEQLRKGSFGACLSGNYGSVEQGAANAKRSAVPDKAEDKPADTEWALKMVLTLAAKDPLQAEREMKTEIDVLVGGRIPPHPNIMRGVHSFQDTIGRELQPRLWDGLEPNAGGTLSPHTTFLVMPLFTAGSLQALLNKRRLRCKGPPFLRLLETMRFLKQMLSAISHLLAHGVAHNDIKPDNWLLCADQRTLVLTDFGACFDSSNPPQPRSKPSSSSPAVPVPCLGASAAVSATDLEQTAVTGRGSNPCRSSGAVGSTAXXXXXXXXXXXXXXSNGTD----LSGAGAAEPLANAVTGRKRPMEAGNFVPSRDFGSANRKHLGVSSMPSCDTGTNADSVPGPQDSKRRRLGYRDQE----------RDKVRICSATGTVCSTTEVSDKMVIPFSNYCVAGAPNILAPELARAWEEETPLNFTRSDVFSVGLCMYRMLRPDSVIIDNGTGLEVKDPLEKTKGLTNQEAWPLPIFPENKGGCPFEVSQLCRGLLLADPCKRLAAFEGQSIASNYVSRLEDADGKGQDAMERSVSASGSAGASRPRYQFESPRAT--GTGEIHGRETRA---DN---ALARKHERLGFVENPKSGHFAAVPPIKSHSAVDGMAPPPSPAGGPSNDSCR-RDRMLLFRGAGRINCERGGA-EGATSNGAAAAGRSSSEERQLPREVDELVKSDRISQMREIFANAAPDNLFKALDTEDWDVAAACAVFGDSTSGDS------RPKLDVARASAPGAS-ATESRSG----LFFGGVAQELRGLR 883          
BLAST of mRNA_C-linearis_contig96.17027.1 vs. uniprot
Match: D7G480_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G480_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 8.160e-87
Identity = 202/435 (46.44%), Postives = 250/435 (57.47%), Query Frame = 0
Query:  473 RFGLTGTSSSIEGDGDGDVSAASPPRKRRRHCGDQEIGGGRVDLQGRDKPEVSSTRLSDQLSDQLLVPFSKYCVTGTPSILAPELARAWREEKDLDFRLSDVFSVGVCMYRMLRPDSVNIDNGTGLEEKGPLEKIEGRFGQHAWPLPLFPENKGGCPYEVAQLCRGLLQPDPVQRQGASEGQSIVSWFVSRLETADTR--DANPTVAAASDSDATSRSGSNNVGPPMTSGGA--GDASMQPASVSGGDNTYGALAG-KRGRDG------SAKASVDMTAPPIPLGSTREFEYRGRDDITLSENARQGRSGRGVCPERASSCLDTAMSRAPREEERRFEEPDELVRSDRISHMREFFASAAPDDLFQALDSKGWDVTAACAIFDGGKSGERGGPAAGKPTLGLDRACMPGDSEARASTEGGPLMLWFDGVAEELKG 896
            R G+TG  S   G     V      ++ R   GDQE   GR+   G     V ST    ++S ++++PFS YCV G P+ LAPELARAW EE  L+F+ SDVFSVG+CMYRMLRPDSV IDNGTGLEEK PLEK +G   Q AWPLP+FPENKGGCP+EV+QLCRGLL  DP +R  ASEGQSI S +VSRLE AD +  DA    A+AS     SR+         T  G   G  +    +++      G++   KRG         S  A   M  PP P G       R RD + L   A +    RG   E A+S    A  R+  EE++   E DELV+SDRIS MRE FASAAP++LF+ALD+K WDV AACA+F    SG+       +P L + RA +PG     AS  G    L+F GVA+EL+G
Sbjct:   19 RLGVTGMPSCDTGTHADSVPGPQDSKRHRLGYGDQERDNGRI---GSTTGTVCSTA---KVSYEMVIPFSNYCVAGAPNTLAPELARAWEEETPLNFKRSDVFSVGLCMYRMLRPDSVIIDNGTGLEEKDPLEKTKGLTNQEAWPLPIFPENKGGCPFEVSQLCRGLLLADPYKRLAASEGQSIASNYVSRLEDADGKGQDAMQRSASASXXXGASRTRYQFESQRPTDTGEIHGRETRADHALARKHEGLGSVKNPKRGHSAAVPPIKSHSAVHGMAPPPSPAGGPLNDGCR-RDRMLLFRGAGRINGERGGA-EGAASNGAAAAGRSSSEEKQLPTEVDELVKSDRISQMREIFASAAPENLFKALDTKDWDVAAACAVFGDSTSGDS------RPKLDVARASVPG-----ASATGSRSGLFFGGVAQELRG 434          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIG6_9PHAE1.180e-20946.92Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G480_ECTSI8.160e-8746.44Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000719Protein kinase domainSMARTSM00220serkin_6coord: 159..660
e-value: 7.3E-11
score: 21.1
IPR000719Protein kinase domainPFAMPF00069Pkinasecoord: 203..365
e-value: 7.1E-13
score: 48.5
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 159..660
score: 22.111
NoneNo IPR availableGENE3D1.10.510.10coord: 194..385
e-value: 1.1E-16
score: 62.9
NoneNo IPR availableGENE3D1.10.510.10coord: 516..666
e-value: 2.9E-8
score: 35.1
NoneNo IPR availablePANTHERPTHR43289FAMILY NOT NAMEDcoord: 121..361
coord: 547..747
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 162..652

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:138797..148171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17027.1mRNA_C-linearis_contig96.17027.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 138786..148911 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17027.1 ID=prot_C-linearis_contig96.17027.1|Name=mRNA_C-linearis_contig96.17027.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=926bp
MATSPGGGRFPSHGSFGGSQGPSLSSSRRRPNNEVAVKEVIDLSTSSPEP
CSTSTGIFAGAKLSDFTIGDRLGATRDGGEGFQGCNSRVFRATLGRRTQA
DFGNLPGDTAEGEKETSQGARPASMAPPVPSAAPGRASEGGHYDGTPGRQ
RRSVVGDIMDLGEQVWKGSFGACFSGNYGGALEGDGRAREAPRSVKPRDG
RGGTEWAIKMALTYAGQDPQQAAQDMETEIAILVGQRLSPHANIMRGVHS
FQDEIGTDLQPILWDGLGPEAGQTLSSRTFFVVMPLYPAGSLQALLNKRR
IRCRGPPFLRLLDTMRFVEQMLSAVSHLLAHGVAHNDIKPDNWLLCADQQ
ALVLTDFGAAVDALRPKRRMSSSSPAALIPQSGAAAATNATGPREATFAS
LTSGPCQHTGAASSDAAVAAAAAAGDRDGAAGAASGEAGKSGDAKKETVP
APTTARYQPDAKRFFSVTGRFGRFGLTGTSSSIEGDGDGDVSAASPPRKR
RRHCGDQEIGGGRVDLQGRDKPEVSSTRLSDQLSDQLLVPFSKYCVTGTP
SILAPELARAWREEKDLDFRLSDVFSVGVCMYRMLRPDSVNIDNGTGLEE
KGPLEKIEGRFGQHAWPLPLFPENKGGCPYEVAQLCRGLLQPDPVQRQGA
SEGQSIVSWFVSRLETADTRDANPTVAAASDSDATSRSGSNNVGPPMTSG
GAGDASMQPASVSGGDNTYGALAGKRGRDGSAKASVDMTAPPIPLGSTRE
FEYRGRDDITLSENARQGRSGRGVCPERASSCLDTAMSRAPREEERRFEE
PDELVRSDRISHMREFFASAAPDDLFQALDSKGWDVTAACAIFDGGKSGE
RGGPAAGKPTLGLDRACMPGDSEARASTEGGPLMLWFDGVAEELKGRRRK
AFAAARSRQSFHGNHGQMPSWRYGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom_sf