Homology
BLAST of mRNA_C-linearis_contig96.17027.1 vs. uniprot
Match:
A0A6H5JIG6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG6_9PHAE)
HSP 1 Score: 629 bits (1623), Expect = 2.010e-206
Identity = 434/925 (46.92%), Postives = 531/925 (57.41%), Query Frame = 3
Query: 81 LSSSRRRPNNEVAV--------------KEVIDLS-TSSPEPCSTSTGIFAGAKLSDFTIGDRLGATRDGGEGFQGCNSRVFRATLGRRTQADFGNLPGDTAEGEKETSQGARPASMAPP-VPSAAPGRASEGGHYDGTPGRQRR---SVVGDIMDLGEQVWKGSFGACFSGNYGGALEGDGRAREAPRSVKPRDGRGGTEWAIKMALTYAGQDPQQAAQDMETEIAILVGQRLSPHANIMRGVHSFQDEIGTDLQPILWDGLGPEAGQTLSSRTFFVVMPLYPAGSLQALLNKRRIRCRGPPFLRLLDTMRFVEQMLSAVSHLLAHGVAHNDIKPDNWLLCADQQALVLTDFGAAVDAL---RPKRRMSSSSPAALIPQSGAAAATNATGPREATFASLTSGPCQHTGAASSDAAVAAXXXXGDRDGAAXXXXGEAGKSGDAKKETVPAPTTARYQPDAKRFFSVTGRFG-----RFGLTGTSSSIEGDGDGDVSAASPPRKRRRHCGDQEIGGGRVDLQGRDKPEVSSTR----LSDQLSDQLLVPFSKYCVTGTPSILAPELARAWREEKDLDFRLSDVFSVGVCMYRMLRPDSVNIDNGTGLEEKGPLEKIEGRFGQHAWPLPLFPENKGGCPYEVAQLCRGLLQPDPVQRQGASEGQSIVSWFVSRLETADTR--DANPTVAAASDSDATSRSGSNNVGPPMTSGGAGDASMQPASVSGGDNTYGALAGKRGRDG----------------SAKASVD-MTAPPIPLGSTREFEYRGRDDITLSENARQGRSGRGVCPERASSCLDTAMSRAPREEERRFEEPDELVRSDRISHMREFFASAAPDDLFQALDSKGWDVTAACAIFDGGKSGERGGPAAGKPTLGLDRACMPGDSEARASTEGGPLMLWFDGVAEELKGRR 2705
LS++RR P+ ++A EVIDL+ T+ P ST+T F KL DF IGDRLGATRDGG+GFQG NSRVFR L R D A + A P+S+A P +PS P S+V D+M + EQ+ KGSFGAC SGNYG +G A+ + K D TEWA+KM LT A +DP QA ++M+TEI +LVG R+ PH NIMRGVHSFQD IG +LQP LWDGL P AG TLS T F+VMPL+ AGSLQALLNKRR+RC+GPPFLRLL+TMRF++QMLSA+SHLLAHGVAHNDIKPDNWLLCADQ+ LVLTDFGA D+ +P+ + SSSSPA +P GA+AA +AT + S PC+ +GA S A XXXX + SG E + T R +P F + FG G++ S G V ++RR DQE RDK + S + ++SD++++PFS YCV G P+ILAPELARAW EE L+F SDVFSVG+CMYRMLRPDSV IDNGTGLE K PLEK +G Q AWPLP+FPENKGGCP+EV+QLCRGLL DP +R A EGQSI S +VSRLE AD + DA +AS S SR P T G G+ + DN ALA K R G + ++VD M PP P G R RD + L A + RG E A+S A R+ EE + E DELV+SDRIS MRE FA+AAPD+LF+ALD++ WDV AACA+F SG+ +P L + RA PG S A S G L+F GVA+EL+G R
Sbjct: 3 LSAARRPPSLDLAAYNQGVTPNEAQRQDNEVIDLTCTTPPHEVSTATD-FRDVKLQDFHIGDRLGATRDGGKGFQGVNSRVFRVRLRSRRH--------DHASRGRADGANAHPSSVASPSLPSXXXXXXXXXXXXXXXPSSTSPPSGSLVKDLMGMCEQLRKGSFGACLSGNYGSVEQGAANAKRSAVPDKAEDKPADTEWALKMVLTLAAKDPLQAEREMKTEIDVLVGGRIPPHPNIMRGVHSFQDTIGRELQPRLWDGLEPNAGGTLSPHTTFLVMPLFTAGSLQALLNKRRLRCKGPPFLRLLETMRFLKQMLSAISHLLAHGVAHNDIKPDNWLLCADQRTLVLTDFGACFDSSNPPQPRSKPSSSSPAVPVPCLGASAAVSATDLEQTAVTGRGSNPCRSSGAVGSTAXXXXXXXXXXXXXXSNGTD----LSGAGAAEPLANAVTGRKRPMEAGNFVPSRDFGSANRKHLGVSSMPSCDTGTNADSVPGPQDSKRRRLGYRDQE----------RDKVRICSATGTVCSTTEVSDKMVIPFSNYCVAGAPNILAPELARAWEEETPLNFTRSDVFSVGLCMYRMLRPDSVIIDNGTGLEVKDPLEKTKGLTNQEAWPLPIFPENKGGCPFEVSQLCRGLLLADPCKRLAAFEGQSIASNYVSRLEDADGKGQDAMERSVSASGSAGASRPRYQFESPRAT--GTGEIHGRETRA---DN---ALARKHERLGFVENPKSGHFAAVPPIKSHSAVDGMAPPPSPAGGPSNDSCR-RDRMLLFRGAGRINCERGGA-EGATSNGAAAAGRSSSEERQLPREVDELVKSDRISQMREIFANAAPDNLFKALDTEDWDVAAACAVFGDSTSGDS------RPKLDVARASAPGAS-ATESRSG----LFFGGVAQELRGLR 883
BLAST of mRNA_C-linearis_contig96.17027.1 vs. uniprot
Match:
D7G480_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G480_ECTSI)
HSP 1 Score: 294 bits (753), Expect = 2.410e-85
Identity = 202/435 (46.44%), Postives = 250/435 (57.47%), Query Frame = 3
Query: 1428 RFGLTGTSSSIEGDGDGDVSAASPPRKRRRHCGDQEIGGGRVDLQGRDKPEVSSTRLSDQLSDQLLVPFSKYCVTGTPSILAPELARAWREEKDLDFRLSDVFSVGVCMYRMLRPDSVNIDNGTGLEEKGPLEKIEGRFGQHAWPLPLFPENKGGCPYEVAQLCRGLLQPDPVQRQGASEGQSIVSWFVSRLETADTR--DANPTVAAASDSDATSRSGSNNVGPPMTSGGA--GDASMQPASVSGGDNTYGALAG-KRGRDG------SAKASVDMTAPPIPLGSTREFEYRGRDDITLSENARQGRSGRGVCPERASSCLDTAMSRAPREEERRFEEPDELVRSDRISHMREFFASAAPDDLFQALDSKGWDVTAACAIFDGGKSGERGGPAAGKPTLGLDRACMPGDSEARASTEGGPLMLWFDGVAEELKG 2699
R G+TG S G V ++ R GDQE GR+ G V ST ++S ++++PFS YCV G P+ LAPELARAW EE L+F+ SDVFSVG+CMYRMLRPDSV IDNGTGLEEK PLEK +G Q AWPLP+FPENKGGCP+EV+QLCRGLL DP +R ASEGQSI S +VSRLE AD + DA A+AS SR+ T G G + +++ G++ KRG S A M PP P G R RD + L A + RG E A+S A R+ EE++ E DELV+SDRIS MRE FASAAP++LF+ALD+K WDV AACA+F SG+ +P L + RA +PG AS G L+F GVA+EL+G
Sbjct: 19 RLGVTGMPSCDTGTHADSVPGPQDSKRHRLGYGDQERDNGRI---GSTTGTVCSTA---KVSYEMVIPFSNYCVAGAPNTLAPELARAWEEETPLNFKRSDVFSVGLCMYRMLRPDSVIIDNGTGLEEKDPLEKTKGLTNQEAWPLPIFPENKGGCPFEVSQLCRGLLLADPYKRLAASEGQSIASNYVSRLEDADGKGQDAMQRSASASXXXGASRTRYQFESQRPTDTGEIHGRETRADHALARKHEGLGSVKNPKRGHSAAVPPIKSHSAVHGMAPPPSPAGGPLNDGCR-RDRMLLFRGAGRINGERGGA-EGAASNGAAAAGRSSSEEKQLPTEVDELVKSDRISQMREIFASAAPENLFKALDTKDWDVAAACAVFGDSTSGDS------RPKLDVARASVPG-----ASATGSRSGLFFGGVAQELRG 434
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17027.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 2.01e-206 / Id = 46.92 Expect = 2.41e-85 / Id = 46.44 Sequence A0A6H5JIG6_9PHAE D7G480_ECTSI
Match Name E-value Identity Description
A0A6H5JIG6_9PHAE 2.010e-206 46.92 Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G480_ECTSI 2.410e-85 46.44 Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Metazoa
Seed ortholog score 62.4
Seed ortholog evalue 1.3e-06
Seed eggNOG ortholog 13735.ENSPSIP00000005635
Preferred name PINK1
KEGG ko ko:K05688,ko:K10632
KEGG Pathway ko04014,ko04137,ko05012,map04014,map04137,map05012
Hectar predicted targeting category other localisation
GOs GO:0000003,GO:0000166,GO:0000266,GO:0000287,GO:0000422,GO:0000785,GO:0000902,GO:0000904,GO:0001101,GO:0001654,GO:0001666,GO:0001932,GO:0001933,GO:0001934,GO:0002020,GO:0002082,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005758,GO:0005829,GO:0005856,GO:0006091,GO:0006140,GO:0006355,GO:0006417,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006839,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007034,GO:0007041,GO:0007154,GO:0007165,GO:0007267,GO:0007268,GO:0007274,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009605,GO:0009628,GO:0009636,GO:0009653,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010035,GO:0010310,GO:0010468,GO:0010469,GO:0010506,GO:0010507,GO:0010508,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010608,GO:0010623,GO:0010628,GO:0010629,GO:0010635,GO:0010637,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010821,GO:0010822,GO:0010823,GO:0010857,GO:0010941,GO:0010942,GO:0010952,GO:0010970,GO:0012501,GO:0014059,GO:0015980,GO:0016006,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016192,GO:0016234,GO:0016236,GO:0016239,GO:0016241,GO:0016242,GO:0016301,GO:0016310,GO:0016504,GO:0016567,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019866,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019941,GO:0022008,GO:0022411,GO:0022414,GO:0022603,GO:0022898,GO:0022900,GO:0022904,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030154,GO:0030162,GO:0030163,GO:0030182,GO:0030234,GO:0030382,GO:0030424,GO:0030426,GO:0030427,GO:0030554,GO:0030705,GO:0030808,GO:0030810,GO:0031056,GO:0031058,GO:0031063,GO:0031065,GO:0031090,GO:0031175,GO:0031224,GO:0031300,GO:0031301,GO:0031306,GO:0031307,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031334,GO:0031396,GO:0031398,GO:0031399,GO:0031400,GO:0031401,GO:0031625,GO:0031647,GO:0031929,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0032147,GO:0032148,GO:0032225,GO:0032226,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032386,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032446,GO:0032501,GO:0032502,GO:0032507,GO:0032553,GO:0032555,GO:0032559,GO:0032592,GO:0032872,GO:0032873,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033044,GO:0033135,GO:0033138,GO:0033157,GO:0033267,GO:0033365,GO:0033554,GO:0033603,GO:0033605,GO:0033674,GO:0034248,GO:0034250,GO:0034599,GO:0034613,GO:0034643,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0034976,GO:0035234,GO:0035303,GO:0035304,GO:0035306,GO:0035307,GO:0035556,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0036289,GO:0036293,GO:0036294,GO:0038203,GO:0040007,GO:0040011,GO:0042176,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042330,GO:0042391,GO:0042493,GO:0042981,GO:0042995,GO:0043005,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043122,GO:0043123,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043269,GO:0043270,GO:0043408,GO:0043409,GO:0043412,GO:0043422,GO:0043457,GO:0043467,GO:0043523,GO:0043524,GO:0043549,GO:0043632,GO:0044087,GO:0044088,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044463,GO:0044464,GO:0045184,GO:0045185,GO:0045333,GO:0045727,GO:0045859,GO:0045860,GO:0045862,GO:0045935,GO:0045936,GO:0045937,GO:0045981,GO:0046328,GO:0046329,GO:0046777,GO:0046872,GO:0046907,GO:0047497,GO:0048070,GO:0048073,GO:0048075,GO:0048076,GO:0048078,GO:0048087,GO:0048285,GO:0048311,GO:0048312,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048749,GO:0048812,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050433,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050804,GO:0050806,GO:0050821,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051090,GO:0051091,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051223,GO:0051234,GO:0051235,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051438,GO:0051443,GO:0051603,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051651,GO:0051654,GO:0051656,GO:0051716,GO:0051881,GO:0051896,GO:0051897,GO:0051952,GO:0051954,GO:0052547,GO:0055114,GO:0055131,GO:0060255,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061134,GO:0061136,GO:0061564,GO:0061726,GO:0061919,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070302,GO:0070303,GO:0070482,GO:0070585,GO:0070647,GO:0070727,GO:0070887,GO:0071229,GO:0071453,GO:0071456,GO:0071704,GO:0071840,GO:0072384,GO:0072594,GO:0072595,GO:0072655,GO:0072656,GO:0080090,GO:0080134,GO:0080135,GO:0090045,GO:0090087,GO:0090140,GO:0090141,GO:0090199,GO:0090200,GO:0090258,GO:0090311,GO:0090312,GO:0097159,GO:0097237,GO:0097367,GO:0097386,GO:0097413,GO:0097449,GO:0097458,GO:0097485,GO:0098573,GO:0098588,GO:0098772,GO:0098779,GO:0098780,GO:0098805,GO:0098916,GO:0099074,GO:0099075,GO:0099111,GO:0099177,GO:0099536,GO:0099537,GO:0099601,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900037,GO:1900038,GO:1900371,GO:1900373,GO:1900407,GO:1900408,GO:1900449,GO:1900451,GO:1900542,GO:1900544,GO:1901031,GO:1901032,GO:1901214,GO:1901215,GO:1901265,GO:1901298,GO:1901299,GO:1901363,GO:1901524,GO:1901526,GO:1901564,GO:1901565,GO:1901575,GO:1901725,GO:1901727,GO:1901857,GO:1902115,GO:1902116,GO:1902175,GO:1902176,GO:1902275,GO:1902284,GO:1902531,GO:1902532,GO:1902533,GO:1902803,GO:1902882,GO:1902883,GO:1902902,GO:1902956,GO:1902958,GO:1903008,GO:1903050,GO:1903146,GO:1903147,GO:1903201,GO:1903202,GO:1903203,GO:1903204,GO:1903205,GO:1903206,GO:1903207,GO:1903208,GO:1903214,GO:1903297,GO:1903298,GO:1903320,GO:1903322,GO:1903362,GO:1903376,GO:1903377,GO:1903383,GO:1903384,GO:1903506,GO:1903530,GO:1903532,GO:1903533,GO:1903578,GO:1903580,GO:1903599,GO:1903747,GO:1903750,GO:1903751,GO:1903827,GO:1903850,GO:1903852,GO:1903862,GO:1904062,GO:1904064,GO:1904542,GO:1904544,GO:1904783,GO:1904880,GO:1904881,GO:1904923,GO:1904925,GO:1905269,GO:1905446,GO:1905448,GO:1990138,GO:2000112,GO:2000273,GO:2000310,GO:2000377,GO:2000378,GO:2000785,GO:2001023,GO:2001024,GO:2001025,GO:2001038,GO:2001039,GO:2001141,GO:2001169,GO:2001171,GO:2001233,GO:2001234,GO:2001235,GO:2001242,GO:2001243,GO:2001252,GO:2001257,GO:2001259
EggNOG free text desc. Serine threonine-protein kinase PINK1, mitochondrial
EggNOG OGs 38HJB@33154,3BCTD@33208,3CYFJ@33213,486TD@7711,498GJ@7742,4CA0N@8459,KOG4158@1,KOG4158@2759
Ec32 ortholog description Protein kinase-like domain
Ec32 ortholog Ec-02_001640.1
EC 2.3.2.27,2.7.11.1
COG Functional cat. T
Best tax level Testudines
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko01000,ko01001,ko03029,ko04121,ko04131
Exons 10
Model size 3529
Cds size 2778
Stop 1
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930821.5154805-UTR-C-linearis_contig96:138785..138796 1622930821.5154805-UTR-C-linearis_contig96:138785..138796 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 138786..138796 +
1690881267.231571-UTR-C-linearis_contig96:138785..138796 1690881267.231571-UTR-C-linearis_contig96:138785..138796 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 138786..138796 +
1622930821.7646394-UTR-C-linearis_contig96:148171..148911 1622930821.7646394-UTR-C-linearis_contig96:148171..148911 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 148172..148911 +
1690881267.3617513-UTR-C-linearis_contig96:148171..148911 1690881267.3617513-UTR-C-linearis_contig96:148171..148911 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig96 148172..148911 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930821.5299945-CDS-C-linearis_contig96:138796..139045 1622930821.5299945-CDS-C-linearis_contig96:138796..139045 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 138797..139045 +
1690881267.246366-CDS-C-linearis_contig96:138796..139045 1690881267.246366-CDS-C-linearis_contig96:138796..139045 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 138797..139045 +
1622930821.5479908-CDS-C-linearis_contig96:142997..143411 1622930821.5479908-CDS-C-linearis_contig96:142997..143411 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 142998..143411 +
1690881267.2647297-CDS-C-linearis_contig96:142997..143411 1690881267.2647297-CDS-C-linearis_contig96:142997..143411 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 142998..143411 +
1622930821.6204123-CDS-C-linearis_contig96:143655..143748 1622930821.6204123-CDS-C-linearis_contig96:143655..143748 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 143656..143748 +
1690881267.2759538-CDS-C-linearis_contig96:143655..143748 1690881267.2759538-CDS-C-linearis_contig96:143655..143748 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 143656..143748 +
1622930821.637671-CDS-C-linearis_contig96:144025..144148 1622930821.637671-CDS-C-linearis_contig96:144025..144148 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 144026..144148 +
1690881267.2869046-CDS-C-linearis_contig96:144025..144148 1690881267.2869046-CDS-C-linearis_contig96:144025..144148 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 144026..144148 +
1622930821.6535237-CDS-C-linearis_contig96:144579..144721 1622930821.6535237-CDS-C-linearis_contig96:144579..144721 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 144580..144721 +
1690881267.2973917-CDS-C-linearis_contig96:144579..144721 1690881267.2973917-CDS-C-linearis_contig96:144579..144721 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 144580..144721 +
1622930821.6708865-CDS-C-linearis_contig96:145037..145735 1622930821.6708865-CDS-C-linearis_contig96:145037..145735 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 145038..145735 +
1690881267.3070984-CDS-C-linearis_contig96:145037..145735 1690881267.3070984-CDS-C-linearis_contig96:145037..145735 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 145038..145735 +
1622930821.7020435-CDS-C-linearis_contig96:145997..146082 1622930821.7020435-CDS-C-linearis_contig96:145997..146082 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 145998..146082 +
1690881267.3176038-CDS-C-linearis_contig96:145997..146082 1690881267.3176038-CDS-C-linearis_contig96:145997..146082 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 145998..146082 +
1622930821.7174113-CDS-C-linearis_contig96:146453..146542 1622930821.7174113-CDS-C-linearis_contig96:146453..146542 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 146454..146542 +
1690881267.3289168-CDS-C-linearis_contig96:146453..146542 1690881267.3289168-CDS-C-linearis_contig96:146453..146542 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 146454..146542 +
1622930821.7331188-CDS-C-linearis_contig96:147052..147576 1622930821.7331188-CDS-C-linearis_contig96:147052..147576 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 147053..147576 +
1690881267.3411353-CDS-C-linearis_contig96:147052..147576 1690881267.3411353-CDS-C-linearis_contig96:147052..147576 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 147053..147576 +
1622930821.7481945-CDS-C-linearis_contig96:147810..148171 1622930821.7481945-CDS-C-linearis_contig96:147810..148171 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 147811..148171 +
1690881267.3521671-CDS-C-linearis_contig96:147810..148171 1690881267.3521671-CDS-C-linearis_contig96:147810..148171 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig96 147811..148171 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig96.17027.1
>prot_C-linearis_contig96.17027.1 ID=prot_C-linearis_contig96.17027.1|Name=mRNA_C-linearis_contig96.17027.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=926bp
MATSPGGGRFPSHGSFGGSQGPSLSSSRRRPNNEVAVKEVIDLSTSSPEP CSTSTGIFAGAKLSDFTIGDRLGATRDGGEGFQGCNSRVFRATLGRRTQA DFGNLPGDTAEGEKETSQGARPASMAPPVPSAAPGRASEGGHYDGTPGRQ RRSVVGDIMDLGEQVWKGSFGACFSGNYGGALEGDGRAREAPRSVKPRDG RGGTEWAIKMALTYAGQDPQQAAQDMETEIAILVGQRLSPHANIMRGVHS FQDEIGTDLQPILWDGLGPEAGQTLSSRTFFVVMPLYPAGSLQALLNKRR IRCRGPPFLRLLDTMRFVEQMLSAVSHLLAHGVAHNDIKPDNWLLCADQQ ALVLTDFGAAVDALRPKRRMSSSSPAALIPQSGAAAATNATGPREATFAS LTSGPCQHTGAASSDAAVAAAAAAGDRDGAAGAASGEAGKSGDAKKETVP APTTARYQPDAKRFFSVTGRFGRFGLTGTSSSIEGDGDGDVSAASPPRKR RRHCGDQEIGGGRVDLQGRDKPEVSSTRLSDQLSDQLLVPFSKYCVTGTP SILAPELARAWREEKDLDFRLSDVFSVGVCMYRMLRPDSVNIDNGTGLEE KGPLEKIEGRFGQHAWPLPLFPENKGGCPYEVAQLCRGLLQPDPVQRQGA SEGQSIVSWFVSRLETADTRDANPTVAAASDSDATSRSGSNNVGPPMTSG GAGDASMQPASVSGGDNTYGALAGKRGRDGSAKASVDMTAPPIPLGSTRE FEYRGRDDITLSENARQGRSGRGVCPERASSCLDTAMSRAPREEERRFEE PDELVRSDRISHMREFFASAAPDDLFQALDSKGWDVTAACAIFDGGKSGE RGGPAAGKPTLGLDRACMPGDSEARASTEGGPLMLWFDGVAEELKGRRRK AFAAARSRQSFHGNHGQMPSWRYGT* back to top mRNA from alignment at C-linearis_contig96:138786..148911+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig96.17027.1 ID=mRNA_C-linearis_contig96.17027.1|Name=mRNA_C-linearis_contig96.17027.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10126bp|location=Sequence derived from alignment at C-linearis_contig96:138786..148911+ (Chordaria linearis ClinC8C monoicous)CTTGAGTGCCG ATGGCGACTTCTCCTGGTGGTGGACGGTTCCCATCACAT
GGAAGTTTCGGTGGTAGCCAAGGTCCATCATTGAGCAGCAGCAGACGACG
ACCAAACAACGAGGTGGCAGTGAAAGAGGTAATAGACTTGAGTACTTCTT
CGCCCGAACCTTGTTCAACTTCAACTGGTATATTCGCCGGGGCGAAGCTG
TCCGACTTCACCATCGGTGACAGGCTGGGAGCGACGCGGGATGGCGGAGA
GGGATTTCAG GTACATCATCTCTTGTCGATGACCCTGGTGTTTTTTTGTT
TTGAATGTATCGCAAAATGACGGAAGATACCACTCCCGTCGCCTCGCGAT
CGTTCGCATAGTCTAGTATTGTAGCGCTGTCGTGTATGCCACAATACTAG
TAGATTTACAGTTGACCCTGCTTTAAGGACGCTCTCGTTAAGGAAACTCC
CCGCGTAAAGGACGACTTTTTTCTTTTTTCTGAGAACCAGGAGGCCCGAC
AAAATGTACAATATGGGAGTACCCGCTCGATTCACAACACGCCCCCCCCT
TCTTGTTTGTGTTCAGCGTTCATGTTTGGTGCGCTTTTTTCACACAGAAG
TAGCGAGCGGTCTGCCGCTGCGGCTGTAACTGGGTGTTGGTATGAATAGA
TTCCTCTCATCTTCGGGCGGTTCATCTGATGATGAGGCGGGGGGAGGTTC
AGGGAACTCTTCTCGATATAGTCTATATGTGGAGGAAAAGCCGTCAGGGT
AGCTTGGCTCCGAGACAGCAGTAGTTTTTACTGCTGTACCTCTGTGCTGC
GCTTAAATAACAAGCTATTTTGGTTTTCACAAGGATGTGGTGAATACATT
TCTACCTGGACTTTACTCCTTGTCCCACTGCCCGCTAAGCAGTACATGAG
ACTGCTGTAGTACACACGTTTGTGCTTGTTCTTCGTTTTCCAAACGTCTC
ATTTTAAGTAAGTCAGTATATTCGACGACAACAAACGGTTGCCCATCGTC
TCGGCGTTGCTCACTGTTTGTACCACACCATTCCTTGTCAATAGACGCGT
AGTGTGAGCTATTGTATGCCTCCATTGGACCCGGGGGTGGTGAGCTATCG
TCCCCTGAATTTAAGGACGCAGCCCCGCTAAGGACGTTTTTTTTCGGGAA
AACCCATATGCGTCCTTAAAGCGGGGTTGACTGCTGAATATAAAACTCAA
AATTTAGGTCGGGTGAACTTTTGGGGCCAGATTCGCGTTTATGTTAATTC
GGGCTCCCTGCCCCCCTGATATAAAATTCGATATTCAGGTAAATCTCGGT
TCTTGAGGCTCAAACCACGGGACTGTCGTCAGCCCGAGGGCAGGAGAAAA
AAACTCTCGTTTGTGGGGAGGAGGTTCTCTCTTTGATTTCCTGATGGTTA
AAAGATGCGAGGGTGGGAGAAGCTGTAAGTTGGGGAGGAATCATGCAGTT
GGCGACTGGCTACTGTGGGTTATGAGGCATGGTGATAGCTGACCCCTGCC
CGAACTGCTGACTGCTGTTGTTCACGGGGAGTGTTCGAGGGGGGAAATAT
TCAATATTCCATTCCGCCATTTCCTCGGGAGAGAGCGGTTGTTGTGCCTG
AGACGGCTGCTGCGAAACACTCTCCTCGCCGCAACCACTGGTCTGCGTAC
CGTATCGCACGACCCTCACCGGCTCGGCGCTGAAAACTATGTGGCTCAAC
TTAGCTTTTGCTGCTGCGTCCGGGCTGCTGTGCGGGTTGTGCGCGGTGGG
AAGAAGTGTGGGTGTGCCATTCGTTCCCAGTCTTGTTGTTGTTGTTGTTG
TCGTCTTCACATTAAAAAAGGTCTGGGTGTGGAAAATTTACCTTGAGGGC
TCTGGAGCCCTCGAGGTAATTTTTCCTTGCCCCAGGCTCTGATAAAATAG
TCCTTGTTGTGGATCTTAGTTTTCTCCCCACCCCCCGAAGAAAATATCTG
CAGTAGGCTGAACTGAATCACACACAACCCAACACAACAACACAACACAC
AATCAAACCACAGGTAGGTCCGCAGAGAGGGAGAGAGAACAGGGGGTCGC
TATCCATCACACCGCCCCGCCGAGCGCCGGCGCCCGGGAATCTGGGAATC
TGCCCTCGCGCACACAGCACACAGGGTCCGCAGCTAGATGTATAGAGAAA
TGGTGGGGGGGGAGGGGGTGGACACACCGAACACAAAACACCGAACCCCC
GCCGCCACGACTTCCTCCCCGGCGAGGCTGCCCAGTGTTTGACGGCGACC
CACGAAGTAGACCGCCCGCACAACACACCCATGGCATGCACACCTAGAAC
CGTCTGCTGTACATGTTTCCGTTGCCTGGGAGGGGAGTTTGAGCGAGTCA
CGGAATTTATGCGGAGTTCTGAACACGCGTACACCAAAGACTCGCGCTAG
CTCGGCGCCGCGGGCATCGATCGAGACGCTGACTGGTGGAGGCGACTCCA
TGGACCTAAATAGTGGCCCCTGTCGCGGTAGTTTGGAATTTGGCAGTGCC
GAACGTGCCAAAGTCGGGTAGGGCAACGCTAAATAGACCACAAGCACCGA
GCCAACGCCGCCGACTGCTGTAGACGATATCGAAAATCGACAGGTGCACA
TGTTGCCTTAGCATCAAAGTAAAAGCATTCCTATGCACTCTCCTTTTTCG
CGATTGGTGGTCTGTAGCGTTTGTTTGGGCGAAAACATCGGTCACGCACG
AACGAACGAACGGACACGTATTGGGCAAAATAGCCCCCCCAGCAAGTTCT
GGGGCCTCGTGTATCGTACATGCAGGGAGGTATCGATAGGAAAGTTTTTG
TTCCCCCACAAAGAAAACTAATAGAGTATAAAACTCGAATTTAGGTAAAA
TTTGGATCTTCCGCCGAATTTAGGTAATTTTTCGAGTTTTATATGTGTCT
AGTGTACAAGGTACACAGGGAACAATAGGCGCTTGGCGATGTCTCGTTTC
CGATGCCACTGTTTTGGGCGTTGGAACCCTCACGATTTCATTGAGCACCC
AAACGTTCAATTTGGTGGAGGTGGGTGCTAAGTTTACCGCGTGGTAAGTA
GAGAGCAGTAGTGAAGCGCTGTTTGCATTTCGGTGTTTCCGAATTTTTCA
GTAATTCAGCGAAACCCGAGCAACCCCGGGTAACATCGCTCACAAACCAA
CTACGGACACGCGTATTACTCTCCACAAGCACGCTATTGCGTAGGATTCG
ACCGCGGCGTAGTTTAAAGTCCGTGACGGAAAGCAGGGACCGTCGCGGAG
GTCATTTGCCGATCAGATCGACCAACGGAAAAGAAAGCAGTTCGACCAGC
ACACATCAGCACACAACATTTCCCATTCCTCGCTTGATAGTTCACCCCCG
GAGCTCTACCCTTCGAGGTCGTGGCCTCTATATATCTCTCTCACCCGGGT
GGGCGTGTTGTAGCAGTTGGCTGCTTCAATCACGAGCGAGAAGCGTCGGC
GTGTGTACCAAGTGTATTTTCGCTCGCCCAAACGGTTGACCCGCATTTTT
GCTTTTTTCAACAAGCACACCAGCGCACAACGCTTCCCATTCCTCGCTTG
ATGGTCCACCCCCAGAGCTCCACCCTTCGAGGTCGTGGCCTTTACATACC
TCTCTCACTCGGTTGGGCGTTTTGTTGGCTGCTTCAATCAAGAGCGAGAA
GCGTTGGCGTGTACCTATGTATTTTTTTCAAGAGGAAAAATAAAAACAAC
ATTTTGCTTCTGAAATTCGAAGTCGCCCTCACGCCGACGCTTCTCGCTCG
TGATTGAAGCAGCCAACTGCTACAAAACGCCCAACCGAGTGAGAGAGGTA
TATAGAGGCCACGACCTTGAAGGGTAGAGCTCCGGGGGTAGACTATCAAG
CGAGGAATGGGAAGCGTTGTGTGCTGGTGTGTACTTGCTGCAGTTTGGGA
GTCGCAAACCAGCTCTTTTTTTCAGTTCCACGTTAACAACCAGTGCATAA
GTCACCCCGTCAAATCATCGAAATAAATCGAAATTCGGGAAAATCTAATC
TTCGGTAACTACGGCCCCAACTATGGCCCAAATATAATAAGTTGCCGTTG
CGCGGAACAGGTAGGTTGTTGTGCTACCATGTACTTGTGCAGGAGTACGT
GAACACAGCAGTATGAGGGTTGAAAACAACGCGAACACAATGAAGTATTA
ATATGAGTACATTGAACGGTTTTTATCCAACCCACGTCCACCCGTCTTGC
ATGTATGCCCAGGGGTGCAATTCGCGGGTGTTCAGAGCAACACTTGGACG
GCGAACTCAGGCCGACTTCGGCAACCTTCCCGGCGACACCGCCGAAGGAG
AAAAGGAAACCTCGCAAGGCGCTCGCCCAGCCTCGATGGCGCCCCCCGTC
CCTTCTGCAGCGCCCGGTCGAGCCTCGGAGGGTGGCCACTACGACGGGAC
ACCTGGGCGGCAGCGGAGAAGCGTTGTAGGCGATATCATGGATCTCGGCG
AGCAGGTGTGGAAGGGGAGCTTTGGCGCTTGCTTCAGTGGCAACTATGGC
GGCGCACTCGAGGGGGACGGGAGGGCGAGGGAAGCACCTAGGTCGGTCAA
GCCAAGAGACGGCCGGGGGGGTACGGAGTGGGCGATTAAGATGGCGTTGA
CTTACGCTGGCCAAGACCCTCAACAG GTAATTTATGGACCACACACCTGT
GTTACGCGTCGGGGTTTGTTTTGTCGACTTGTGTTTCTCGTCTACAGTTG
GCTTTTCGTTTAGAACAACCTCCTTCTCAGATCCACTCAGATCCATTCTT
GTTGGAAGGGGCAACGGTGTACAGATATCAATATTCAATATGATGAAACT
GCTGTGCAATGCTCAATGCTCGTACGCTACCCAAGAATATCTCCCCTACC
CGCTCGGCACTTAACTCCAGGCCGCTCAAGACATGGAAACAGAGATCGCT
ATACTCGTCGGGCAGCGGCTCTCTCCGCACGCTAACATCATGCGCGGGGT
TCATAGCTTCCAG GTAGGCTGGGTGACGACCTACACGGTGAACGATTTGT
ATCCCGACATGCAACATACATACTCCGTGGTCCCAGGCACGAAGGGTTGG
CCATTAAAATCGTACTGCTGTAGAGGTGTCGTGTCAATATGTGTGTGACT
GAGGGTGTCATCTCCCCCTGAGTGTGTCAGTGTCAGGATCAGTACCTGAC
CGCAGACCGTGCCGGTGTTGGATATATTTCATGGACGTGTTCAACGAGAA
GGAAGACACGAAAAACCCTATGTTTTGTTCTCGTTCACAGGACGAAATCG
GAACAGACCTTCAACCGATACTGTGGGATGGGCTGGGGCCTGAAGCCGGA
CAAACGCTAAGCTCTCGCACGTTTTTCGTGGTTATGCCGCTGTATCCGGC
TGGGTCTCTTCAG GTACGATACCGTCATGAGTTGTGAAACGATTTTAATG
ACTTGATTGCGCAGTTGGTGACTACTTCGTACTTCGTGTGTATTGTACTT
GTCTCAATGCGACGTATTCGTCTCAATGCGATCCACGCAAAGGCTATTTG
GCCGGTAGTGCGCGTGGCAAATGGCAAATGGGTATTTGCGTCTCATTTCG
GAAAGCGCACGAAGAACCAACAATGTGAATCACTTGGGCATATTTTTTCA
AGTTCTTATGGTCGATGAATTGAGGGAGTTGCCCACTCGGAGGCATCGCT
CGTCATGGTCGCACTCGAACCCATCTTGGTGCTTTGTTCACCAGGCTACG
TCGGCTTGTACCGTCGTGGTCGGACAACGCACGAGAGAGGCAGAAGACCC
CATACTTGTCCGATACTACGAAACACCACGTATCTTCCCAACAGGCTCTG
CTCAACAAACGACGGATACGCTGTAGGGGGCCGCCGTTCTTGCGCCTTTT
AGATACGATGCGGTTTGTGGAGCAGATGCTGAGCGCGGTCAGCCACCTCC
TTGCTCACGGCGTGGCCCACAACGATATCAAACCAG GTAGACGAGAACGT
GGAGCGCTAGAGGCTCATCCGCCGCGGCCCCGATCCAACCTTTCCCTATA
GAAACGCCGAAATCGTTTTTTCTCTCCTCGCGTATACGCGTGAGCGCTTT
GTGTAGGGTGCGCTGGTGTAGGCTCGACGCGGTTGCCTGTGACCTTCGTA
TACCGCAAACAAGACTCGTACTGTACGGTTTTGCTGCCCCACCCCCCCCT
GCCCGCTAGCACACCTCCGGAGCATCCGACGCCGCTTGGATTCATACCCC
ATACCCGCTGGCTGTAACGCAATTCCTACGGATGCTGATGTTTTTTTCGC
AGACAACTGGCTCCTTTGCGCAGATCAGCAGGCGCTGGTTCTTACCGACT
TCGGTGCCGCAGTCGATGCGTTGCGGCCGAAACGTCGCATGTCTTCGTCT
TCGCCGGCCGCGCTTATACCTCAATCCGGCGCCGCCGCCGCAACCAATGC
CACCGGCCCACGTGAAGCTACCTTCGCTAGCCTCACTTCGGGCCCTTGCC
AACATACAGGAGCAGCAAGTAGCGATGCTGCTGTTGCTGCTGCCGCCGCT
GCTGGCGATCGTGATGGTGCTGCTGGCGCGGCGAGTGGGGAAGCGGGCAA
AAGTGGGGACGCAAAGAAAGAAACAGTCCCGGCTCCTACGACCGCGCGAT
ATCAACCCGACGCGAAGCGTTTTTTTTCGGTGACCGGGCGCTTCGGGCGC
TTCGGCTTGACTGGCACATCCTCGAGTATCGAAGGTGATGGGGATGGGGA
TGTGAGTGCCGCGAGCCCGCCAAGGAAACGACGCCGGCATTGCGGCGATC
AGGAGATTGGCGGCGGGCGCGTAGATCTACAGGGTAGAGACAAGCCAGAG
GTATCCTCGACAAGGCTCTCCGACCAGCTCTCCGACCAGCTGTTAGTCCC
TTTCAGCAAATACTGTGTCACAGGAACGCCTAGCATACTCGCCCCGGAGC
TGGCTCGAGCATGGCGGGAGGAGAAAGATCTAGACTTCAGGCTAAGCGAT
GTGAGTCTTCGCTGGTTGTCGGGTTTCACCCGATAATACACTTGTGCCAC
ATGGCCCGAGCACCATCCTGCTCCGCTGCCTTGGGTGGAGTTGCCTCGTA
GGATCGTTGTTCTCCGCGCAAAGGGCTCAGTCAGATCACGGAGAAAACTG
TACTCGTACCTATATTCGTCGATGTTTGTTTTTCTGGGCTTCGCTGAACA
TTGCAATGTCGATGGCTACCTCGTGCGCGTTTTCTCTGGTGTTTGCTGTT
ACTTTACCTCAGGTATTTTCCGTTGGCGTGTGCATGTATCGCATGCTTCG
TCCTGACTCTGTTAACATCGACAACGGCACCGGGCTGGAAGAAAAAG GTG
TGTTTAACATGGTTTTATCGTGCACGAGATTGGTCTTCTTGAGTTGAGAT
GTCGGGTGTTCCCAGATACAGCGGATGCAGAGCTATGCAATTGTAGGTAT
ACTCTATCCGAGCGTCACACCTGTCACAATATTTCAACAATACTAATACG
GCTATATTTGAGGTCCCTCAGTGGCAACTGCTGTGCTCACTATAATAGTT
TCCCATTGAACTATGTCTATTCGTACAACTGTATGTCAAGGACGAGTTCC
CATGGCATTCGAAATGTAGCCGAATTTTGCCACGCAATAGTTTCGTGTCC
GGCAAATACTTTTCAAGCTGCACTGGGATACCATTAATGGCCCCCGGCCC
CTCTCTGCTGTGTGGCAGGTCCCTTGGAGAAGATCGAAGGGCGGTTCGGC
CAGCATGCGTGGCCCCTGCCGTTGTTCCCGGAGAACAAGGGAGGCTGCCC
ATACGAG GTATCCTACCAGCCGCTCTATTCTTGCTGTTCTTGCTCCATTC
CGCGGCAAGTGTTGGACTTGTCCTGGCGCACACACGGGCTGTCGAATACT
TGCACTATGATAGTGTCAGTTTGGCCCCCGTAAAGGCTTGGGCCGTTTGG
TGTGTATGTCGATGTCTCCCGGCAAGTTTCACGTCTGTTTTTGTTTTTCC
GCGCGCTTGGCTACCCCACACCCAGCGCCGATGGAAAAAGTTGATGCTTT
GTTTCTCTGTTGGCAAGTCAAGTTTGAGCTCACTTCATGCAGTCAGTGCT
TATTGGCTCCTCTCCCGCCTTTTCCTCTCGCTGTGCTTCAGGAAACAGAC
TTGCTTCCGGCAGCAGAACTTTCGTATCATGTGCCATGCCCGGCCTGGCC
TTTCTTCGTTCTACGGCGTGAAAGCGTGTCGTCGTCGTGTCGCTTTACCC
GTACAATATGTGTGCCCGATCCATCCCTCACGTCGATATGCCCGCATCGA
ATCTTACCGTATCACAGGTTGCACAACTGTGCCGTGGACTCCTGCAGCCC
GATCCAGTTCAGAGGCAGGGGGCGTCCGAGGGGCAAAGCATCGTGTCGTG
GTTCGTTTCCCGCCTCGAAACCGCTGACACACGGGACGCAAACCCAACTG
TTGCCGCTGCTTCTGATTCCGATGCCACAAGTCGGAGCGGCAGTAACAAT
GTAGGGCCGCCCATGACGAGCGGTGGGGCTGGTGATGCAAGTATGCAACC
TGCGAGTGTTTCTGGGGGTGATAATACCTACGGCGCATTGGCGGGGAAGC
GCGGGCGTGATGGTTCGGCGAAAGCTTCTGTCGATATGACGGCCCCACCG
ATTCCGTTGGGGAGTACCCGGGAATTTGAGTACCGTGGTAGAGACGATAT
AACGCTGTCAGAAAATGCGAGGCAAGGAAGATCGGGACGAGGGGTGTGTC
CGGAACGGGCAAGCTCGTGCCTGGACACGGCGATGAGCAGAGCGCCGAGG
GAAGAGGAGCGTCGTTTTGAAGAGCCTGATGAGCTCGTACG GTGAGTTGT
GGATGGCCCAAGGAATTACACAGCAACCGCAAGTCTGGTTCTTAAGCAGG
CGCACATCTGGGGATACTTAATTGAGCTGCAACTTGTACCAGAACTCGCT
GCCAACGATAAGCCAGTAGCCCATTCTCATTTAGGAGTTATTTTGCTTTC
CACCCAATCTTGATTTTGCGCTCTGCCTTGTTTTGGCCACGCCTTTGATC
GCACGAATTTTGTCCACTCCTGCAGATCCGATCGAATTTCTCACATGAGA
GAATTCTTCGCGAGCGCCGCGCCCGATGATCTTTTCCAGGCGCTCGACAG
CAAGGGTTGGGACGTGACCGCAGCGTGCGCTATTTTCGATGGCGGCAAAA
GCGGGGAAAGGGGAGGCCCTGCGGCTGGTAAGCCTACTTTGGGTCTCGAT
CGAGCGTGCATGCCGGGGGATTCAGAAGCACGCGCTTCAACTGAAGGCGG
GCCGCTCATGCTCTGGTTCGATGGTGTCGCCGAGGAACTGAAAGGACGGC
GTAGGAAGGCATTCGCCGCCGCCCGTAGTAGACAGTCGTTCCACGGAAAC
CATGGTCAGATGCCTTCATGGAGGTATGGTACGTGA TCGAGAAGGAAGAG
GACCATGCACCCAAGCTCATTTTTCATTGCGGTTTCTGAATTGTACTCCT
ATGAGGGTGCCGAAGCTGGCACTTGGCGAATGAGGGTGCAGGAAATTCAC
GTGCTAGGTTGTGGTAGGCTGGTGAAGCGGTGGAATCAAGTTGGCTGGAG
CGACATTATAAGCGACGGTGTGTTCATGTGTTGAATGCGTGGCAGAATTT
TGTGTTGTGTTGGTGCTGTAAGAATTTGCGGGGTATAGGGTGTGGTGTAT
ACAGTCCGAGTTCTTAGAGTCATCTTCATGTTTCCGTGTATAGACGTGGT
TTGCACCAAGTTTGGACATGTGCGTGCAAATATTTCTGTTTTCTCAGCGT
AGAAGAGAAAACTTGGAGATGATACTTCGAAGTCCATACTTAAGGTTACT
GGTTGTTGTGGGATGCAAAGCGATATCTGGTTGTGTGATGGTCTGTTGTA
CATTCCATTCGATTGTTTTTCTTTTGCTGCAGGTTTTGCTTCTGTTCCAG
CCGAACGGTGCGTACATAGTATCCACACGAACCTCCCTTTGGCCGGAGCA
AAGACTTAGTTGAGTGTACCCATCATGGGTAGTGATGTTTCCAGCGGCAA
AATAGTAATTCATTTCGGCATACTAAAACATGCGTTCCTCCCAGGGGCAA
ACATGCAAGTTCGAATTTCCGGGACTGAAAAGGTTGTTGAGTTCTCGAGT
GGAACCACGGAAAGTCAGCCGGTCGC back to top Coding sequence (CDS) from alignment at C-linearis_contig96:138786..148911+
>mRNA_C-linearis_contig96.17027.1 ID=mRNA_C-linearis_contig96.17027.1|Name=mRNA_C-linearis_contig96.17027.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5556bp|location=Sequence derived from alignment at C-linearis_contig96:138786..148911+ (Chordaria linearis ClinC8C monoicous) ATGGCGACTTCTCCTGGTGGTGGACGGTTCCCATCACATGGAAGTTTCGG TGGTAGCCAAGGTCCATCATTGAGCAGCAGCAGACGACGACCAAACAACG AGGTGGCAGTGAAAGAGGTAATAGACTTGAGTACTTCTTCGCCCGAACCT TGTTCAACTTCAACTGGTATATTCGCCGGGGCGAAGCTGTCCGACTTCAC CATCGGTGACAGGCTGGGAGCGACGCGGGATGGCGGAGAGGGATTTCAGA TGGCGACTTCTCCTGGTGGTGGACGGTTCCCATCACATGGAAGTTTCGGT GGTAGCCAAGGTCCATCATTGAGCAGCAGCAGACGACGACCAAACAACGA GGTGGCAGTGAAAGAGGTAATAGACTTGAGTACTTCTTCGCCCGAACCTT GTTCAACTTCAACTGGTATATTCGCCGGGGCGAAGCTGTCCGACTTCACC ATCGGTGACAGGCTGGGAGCGACGCGGGATGGCGGAGAGGGATTTCAGGG GTGCAATTCGCGGGTGTTCAGAGCAACACTTGGACGGCGAACTCAGGCCG ACTTCGGCAACCTTCCCGGCGACACCGCCGAAGGAGAAAAGGAAACCTCG CAAGGCGCTCGCCCAGCCTCGATGGCGCCCCCCGTCCCTTCTGCAGCGCC CGGTCGAGCCTCGGAGGGTGGCCACTACGACGGGACACCTGGGCGGCAGC GGAGAAGCGTTGTAGGCGATATCATGGATCTCGGCGAGCAGGTGTGGAAG GGGAGCTTTGGCGCTTGCTTCAGTGGCAACTATGGCGGCGCACTCGAGGG GGACGGGAGGGCGAGGGAAGCACCTAGGTCGGTCAAGCCAAGAGACGGCC GGGGGGGTACGGAGTGGGCGATTAAGATGGCGTTGACTTACGCTGGCCAA GACCCTCAACAGGGGTGCAATTCGCGGGTGTTCAGAGCAACACTTGGACG GCGAACTCAGGCCGACTTCGGCAACCTTCCCGGCGACACCGCCGAAGGAG AAAAGGAAACCTCGCAAGGCGCTCGCCCAGCCTCGATGGCGCCCCCCGTC CCTTCTGCAGCGCCCGGTCGAGCCTCGGAGGGTGGCCACTACGACGGGAC ACCTGGGCGGCAGCGGAGAAGCGTTGTAGGCGATATCATGGATCTCGGCG AGCAGGTGTGGAAGGGGAGCTTTGGCGCTTGCTTCAGTGGCAACTATGGC GGCGCACTCGAGGGGGACGGGAGGGCGAGGGAAGCACCTAGGTCGGTCAA GCCAAGAGACGGCCGGGGGGGTACGGAGTGGGCGATTAAGATGGCGTTGA CTTACGCTGGCCAAGACCCTCAACAGGCCGCTCAAGACATGGAAACAGAG ATCGCTATACTCGTCGGGCAGCGGCTCTCTCCGCACGCTAACATCATGCG CGGGGTTCATAGCTTCCAGGCCGCTCAAGACATGGAAACAGAGATCGCTA TACTCGTCGGGCAGCGGCTCTCTCCGCACGCTAACATCATGCGCGGGGTT CATAGCTTCCAGGACGAAATCGGAACAGACCTTCAACCGATACTGTGGGA TGGGCTGGGGCCTGAAGCCGGACAAACGCTAAGCTCTCGCACGTTTTTCG TGGTTATGCCGCTGTATCCGGCTGGGTCTCTTCAGGACGAAATCGGAACA GACCTTCAACCGATACTGTGGGATGGGCTGGGGCCTGAAGCCGGACAAAC GCTAAGCTCTCGCACGTTTTTCGTGGTTATGCCGCTGTATCCGGCTGGGT CTCTTCAGGCTCTGCTCAACAAACGACGGATACGCTGTAGGGGGCCGCCG TTCTTGCGCCTTTTAGATACGATGCGGTTTGTGGAGCAGATGCTGAGCGC GGTCAGCCACCTCCTTGCTCACGGCGTGGCCCACAACGATATCAAACCAG GCTCTGCTCAACAAACGACGGATACGCTGTAGGGGGCCGCCGTTCTTGCG CCTTTTAGATACGATGCGGTTTGTGGAGCAGATGCTGAGCGCGGTCAGCC ACCTCCTTGCTCACGGCGTGGCCCACAACGATATCAAACCAGACAACTGG CTCCTTTGCGCAGATCAGCAGGCGCTGGTTCTTACCGACTTCGGTGCCGC AGTCGATGCGTTGCGGCCGAAACGTCGCATGTCTTCGTCTTCGCCGGCCG CGCTTATACCTCAATCCGGCGCCGCCGCCGCAACCAATGCCACCGGCCCA CGTGAAGCTACCTTCGCTAGCCTCACTTCGGGCCCTTGCCAACATACAGG AGCAGCAAGTAGCGATGCTGCTGTTGCTGCTGCCGCCGCTGCTGGCGATC GTGATGGTGCTGCTGGCGCGGCGAGTGGGGAAGCGGGCAAAAGTGGGGAC GCAAAGAAAGAAACAGTCCCGGCTCCTACGACCGCGCGATATCAACCCGA CGCGAAGCGTTTTTTTTCGGTGACCGGGCGCTTCGGGCGCTTCGGCTTGA CTGGCACATCCTCGAGTATCGAAGGTGATGGGGATGGGGATGTGAGTGCC GCGAGCCCGCCAAGGAAACGACGCCGGCATTGCGGCGATCAGGAGATTGG CGGCGGGCGCGTAGATCTACAGGGTAGAGACAAGCCAGAGGTATCCTCGA CAAGGCTCTCCGACCAGCTCTCCGACCAGCTGTTAGTCCCTTTCAGCAAA TACTGTGTCACAGGAACGCCTAGCATACTCGCCCCGGAGCTGGCTCGAGC ATGGCGGGAGGAGAAAGATCTAGACTTCAGGCTAAGCGATACAACTGGCT CCTTTGCGCAGATCAGCAGGCGCTGGTTCTTACCGACTTCGGTGCCGCAG TCGATGCGTTGCGGCCGAAACGTCGCATGTCTTCGTCTTCGCCGGCCGCG CTTATACCTCAATCCGGCGCCGCCGCCGCAACCAATGCCACCGGCCCACG TGAAGCTACCTTCGCTAGCCTCACTTCGGGCCCTTGCCAACATACAGGAG CAGCAAGTAGCGATGCTGCTGTTGCTGCTGCCGCCGCTGCTGGCGATCGT GATGGTGCTGCTGGCGCGGCGAGTGGGGAAGCGGGCAAAAGTGGGGACGC AAAGAAAGAAACAGTCCCGGCTCCTACGACCGCGCGATATCAACCCGACG CGAAGCGTTTTTTTTCGGTGACCGGGCGCTTCGGGCGCTTCGGCTTGACT GGCACATCCTCGAGTATCGAAGGTGATGGGGATGGGGATGTGAGTGCCGC GAGCCCGCCAAGGAAACGACGCCGGCATTGCGGCGATCAGGAGATTGGCG GCGGGCGCGTAGATCTACAGGGTAGAGACAAGCCAGAGGTATCCTCGACA AGGCTCTCCGACCAGCTCTCCGACCAGCTGTTAGTCCCTTTCAGCAAATA CTGTGTCACAGGAACGCCTAGCATACTCGCCCCGGAGCTGGCTCGAGCAT GGCGGGAGGAGAAAGATCTAGACTTCAGGCTAAGCGATGTATTTTCCGTT GGCGTGTGCATGTATCGCATGCTTCGTCCTGACTCTGTTAACATCGACAA CGGCACCGGGCTGGAAGAAAAAGGTATTTTCCGTTGGCGTGTGCATGTAT CGCATGCTTCGTCCTGACTCTGTTAACATCGACAACGGCACCGGGCTGGA AGAAAAAGGTCCCTTGGAGAAGATCGAAGGGCGGTTCGGCCAGCATGCGT GGCCCCTGCCGTTGTTCCCGGAGAACAAGGGAGGCTGCCCATACGAGGTC CCTTGGAGAAGATCGAAGGGCGGTTCGGCCAGCATGCGTGGCCCCTGCCG TTGTTCCCGGAGAACAAGGGAGGCTGCCCATACGAGGTTGCACAACTGTG CCGTGGACTCCTGCAGCCCGATCCAGTTCAGAGGCAGGGGGCGTCCGAGG GGCAAAGCATCGTGTCGTGGTTCGTTTCCCGCCTCGAAACCGCTGACACA CGGGACGCAAACCCAACTGTTGCCGCTGCTTCTGATTCCGATGCCACAAG TCGGAGCGGCAGTAACAATGTAGGGCCGCCCATGACGAGCGGTGGGGCTG GTGATGCAAGTATGCAACCTGCGAGTGTTTCTGGGGGTGATAATACCTAC GGCGCATTGGCGGGGAAGCGCGGGCGTGATGGTTCGGCGAAAGCTTCTGT CGATATGACGGCCCCACCGATTCCGTTGGGGAGTACCCGGGAATTTGAGT ACCGTGGTAGAGACGATATAACGCTGTCAGAAAATGCGAGGCAAGGAAGA TCGGGACGAGGGGTGTGTCCGGAACGGGCAAGCTCGTGCCTGGACACGGC GATGAGCAGAGCGCCGAGGGAAGAGGAGCGTCGTTTTGAAGAGCCTGATG AGCTCGTACGGTTGCACAACTGTGCCGTGGACTCCTGCAGCCCGATCCAG TTCAGAGGCAGGGGGCGTCCGAGGGGCAAAGCATCGTGTCGTGGTTCGTT TCCCGCCTCGAAACCGCTGACACACGGGACGCAAACCCAACTGTTGCCGC TGCTTCTGATTCCGATGCCACAAGTCGGAGCGGCAGTAACAATGTAGGGC CGCCCATGACGAGCGGTGGGGCTGGTGATGCAAGTATGCAACCTGCGAGT GTTTCTGGGGGTGATAATACCTACGGCGCATTGGCGGGGAAGCGCGGGCG TGATGGTTCGGCGAAAGCTTCTGTCGATATGACGGCCCCACCGATTCCGT TGGGGAGTACCCGGGAATTTGAGTACCGTGGTAGAGACGATATAACGCTG TCAGAAAATGCGAGGCAAGGAAGATCGGGACGAGGGGTGTGTCCGGAACG GGCAAGCTCGTGCCTGGACACGGCGATGAGCAGAGCGCCGAGGGAAGAGG AGCGTCGTTTTGAAGAGCCTGATGAGCTCGTACGATCCGATCGAATTTCT CACATGAGAGAATTCTTCGCGAGCGCCGCGCCCGATGATCTTTTCCAGGC GCTCGACAGCAAGGGTTGGGACGTGACCGCAGCGTGCGCTATTTTCGATG GCGGCAAAAGCGGGGAAAGGGGAGGCCCTGCGGCTGGTAAGCCTACTTTG GGTCTCGATCGAGCGTGCATGCCGGGGGATTCAGAAGCACGCGCTTCAAC TGAAGGCGGGCCGCTCATGCTCTGGTTCGATGGTGTCGCCGAGGAACTGA AAGGACGGCGTAGGAAGGCATTCGCCGCCGCCCGTAGTAGACAGTCGTTC CACGGAAACCATGGTCAGATGCCTTCATGGAGGTATGGTACGTGAATCCG ATCGAATTTCTCACATGAGAGAATTCTTCGCGAGCGCCGCGCCCGATGAT CTTTTCCAGGCGCTCGACAGCAAGGGTTGGGACGTGACCGCAGCGTGCGC TATTTTCGATGGCGGCAAAAGCGGGGAAAGGGGAGGCCCTGCGGCTGGTA AGCCTACTTTGGGTCTCGATCGAGCGTGCATGCCGGGGGATTCAGAAGCA CGCGCTTCAACTGAAGGCGGGCCGCTCATGCTCTGGTTCGATGGTGTCGC CGAGGAACTGAAAGGACGGCGTAGGAAGGCATTCGCCGCCGCCCGTAGTA GACAGTCGTTCCACGGAAACCATGGTCAGATGCCTTCATGGAGGTATGGT ACGTGA back to top