prot_C-linearis_contig96.17020.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17020.1
Unique Nameprot_C-linearis_contig96.17020.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length480
Homology
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: D7G477_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G477_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 3.680e-159
Identity = 310/484 (64.05%), Postives = 346/484 (71.49%), Query Frame = 0
Query:    1 MFQKLTT-DGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPELPKRTSENKLKKARTRHPPAAAVKPKGAERIKGQIEPAKLSKRRSRLASLVES-PDGDGPRTAIPESNESAIEEERIQGPVNEKRETPAGG---MIVGNGAIRAPDEYFQTSQTSAVESRDHGAPDRKRRPNLRQLDAKDVDAVFAEDLGAINSLRDVQSWRVLVMGLQRLSAKDMSRRVQVKARPQRRHTLPLATKGELVHKQEFLPGRGRRISLFGTAYDPAALFLKKRAERGSTREVELEKDVAKAAAKWNLKPLVESAHRGANGATDAERGDGSRGNLSVAGLPLLDEDIDVIAHLLRQNHAFNKLDLSRCFLSETQFVSLAQALAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGCKGLDEKGIRQILTAARKKANLLKFNGMELATLRAESSDELDLSG 479
            +F+KL T DGYL G+RAV LL KSG+ Q+TL++VWALAD D DGRLS+KEFC AMHLIGC RKG PLPE+P R    K KK + R  P    KP+  +  K +I  AK  KRRSRLASLV+   D + P  +I +S+E  +   RI+        T  G    MI      R   E  Q  +  A ESRDHG   R RRPNLRQLD KDVDAVFAE  GAINSLRDVQSWRVLVMGLQRLS KDM+R V    RP+RRHTLPLA KG+L  KQ++LPGRGRR SL GTAY+PAALFLK+RAER S RE +LEKD AKAA KWNLKPL E + R  +   D E+   SRGNLSVAGLPLLDED+D+I HLLRQNHAF +LDLSRCFLSE QFVSLAQALAW        XXXXXXXXXXXXXXXXXXXXXXXX     RGCKGLDEK I+ IL  AR K NLL FNGM LA LRAE SDELDLSG
Sbjct:   22 IFEKLDTEDGYLSGKRAVVLLRKSGVPQETLSKVWALADSDVDGRLSLKEFCTAMHLIGCFRKGLPLPEVPSR----KPKKPKKRQSPGGDTKPREGQG-KREITFAKSPKRRSRLASLVDPHQDANPPGASIAKSHEPLLPLSRIRKSATLWILTLCGSRSPMITSQWKSRRLKELRQ-HRKEAEESRDHGGQSRIRRPNLRQLDDKDVDAVFAEGPGAINSLRDVQSWRVLVMGLQRLSGKDMARHVPTNVRPRRRHTLPLAAKGDLARKQDYLPGRGRRTSLLGTAYEPAALFLKQRAERRSIREADLEKDTAKAAEKWNLKPLREKSERCES---DGEQ-TSSRGNLSVAGLPLLDEDVDIIVHLLRQNHAFKRLDLSRCFLSEKQFVSLAQALAWNSRIEELFXXXXXXXXXXXXXXXXXXXXXXXXHSLDVRGCKGLDEKSIKVILGGARSKGNLLTFNGMNLADLRAEGSDELDLSG 495          
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A8J5X7G7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7G7_DIALT)

HSP 1 Score: 68.9 bits (167), Expect = 1.510e-8
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    9 GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLP 67
            G+L G +A  LL KSGL ++TL+R+W L+D D DGRLS +EF AAMHL     +G PLP
Sbjct:  188 GFLSGAQAAPLLSKSGLPKETLSRIWGLSDADRDGRLSQREFRAAMHLAMRTARGTPLP 246          
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A183GVI4_HELPZ (Uncharacterized protein n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183GVI4_HELPZ)

HSP 1 Score: 62.0 bits (149), Expect = 2.570e-7
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    9 GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPE 68
            G+L G+   S LG SGL    LA +W L+D + DG+L+V EFC AMHLI  V+ G  LP+
Sbjct:   96 GFLTGQAGRSALGMSGLPTTALAHIWTLSDVNKDGKLTVDEFCIAMHLIDMVKAGYALPD 155          
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A0K0CXP6_ANGCA (Uncharacterized protein n=1 Tax=Angiostrongylus cantonensis TaxID=6313 RepID=A0A0K0CXP6_ANGCA)

HSP 1 Score: 63.5 bits (153), Expect = 5.490e-7
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    9 GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPE 68
            G+L G+   S LG SGL   TLA +W L+D + DG+L+V EFC AMHLI  V+ G  LP+
Sbjct:  183 GFLTGQAGRSALGMSGLPTPTLAHIWTLSDVNKDGKLTVDEFCIAMHLIDMVKVGYALPD 242          
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A443SJD9_9ACAR (Intersectin-2-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SJD9_9ACAR)

HSP 1 Score: 58.9 bits (141), Expect = 6.200e-7
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    8 DGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKG 63
            +G + G++A  L  +SGL    LA++W LAD DADGR+ V EFC A+HLI    KG
Sbjct:   29 NGLITGDQAKGLFLQSGLPPSVLAKIWELADVDADGRMDVNEFCIALHLIALKLKG 84          
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A1I7X785_HETBA (Uncharacterized protein n=1 Tax=Heterorhabditis bacteriophora TaxID=37862 RepID=A0A1I7X785_HETBA)

HSP 1 Score: 63.5 bits (153), Expect = 6.640e-7
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    9 GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPE 68
            G+L G    S +G SGL   TLA +W+L+D + DGRLSV EFC AMHLI   + G  LP+
Sbjct:  190 GFLSGSAGRSAMGMSGLPTPTLAHIWSLSDVNKDGRLSVDEFCIAMHLIDMCKAGFALPD 249          
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A443RH56_9ACAR (Intersectin-2-like isoform X13 n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A443RH56_9ACAR)

HSP 1 Score: 63.5 bits (153), Expect = 7.120e-7
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    2 FQKLTTDGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKG 63
            F+    +G + GE+A  L  KSGL  Q LA++W LAD DADGR+ V EFC A+HLI    KG
Sbjct:   24 FRLQPINGLITGEQAKGLFLKSGLPPQILAKIWELADVDADGRMDVNEFCIALHLIALKLKG 85          
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: UPI0006D51980 (intersectin-1 n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D51980)

HSP 1 Score: 63.5 bits (153), Expect = 7.140e-7
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    6 TTD----GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLP 67
            TTD    GYL G +A ++L  S L Q  LA++WALAD DADGRLS +EF  A+HL    R GE LP
Sbjct:  401 TTDKARSGYLTGPQARTILLASKLPQPVLAQIWALADTDADGRLSCEEFVLALHLCDLARAGETLP 466          
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A0N4YXY0_NIPBR (Dynamin-associated protein, putative (inferred by orthology to a S. mansoni protein) n=1 Tax=Nippostrongylus brasiliensis TaxID=27835 RepID=A0A0N4YXY0_NIPBR)

HSP 1 Score: 62.0 bits (149), Expect = 7.710e-7
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    9 GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPE 68
            G+L G+   S LG SGL    LA +W L+D + DG+L+V EFC AMHLI  V+ G  LP+
Sbjct:  200 GFLTGQAGRSALGMSGLPTTALAHIWTLSDVNKDGKLTVDEFCIAMHLIDMVKAGYALPD 259          
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A0M8N146_9HYPO (Putative calcium-binding protein n=1 Tax=Escovopsis weberi TaxID=150374 RepID=A0A0M8N146_9HYPO)

HSP 1 Score: 62.8 bits (151), Expect = 1.150e-6
Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0
Query:    9 GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPELPKRTSENKLKKARTRHPPAAAV 91
            GYL GE+A S+  KSGL+ +TL R+W LAD D  G L++ EF  AMHL+   + G  L  LP       L +A +R PPAAA 
Sbjct:  156 GYLPGEQARSIFDKSGLANETLGRIWGLADTDQRGALALPEFIIAMHLLTSTKTGS-LRALPNVLPPG-LYEAASRAPPAAAA 236          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G477_ECTSI3.680e-15964.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J5X7G7_DIALT1.510e-855.93Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A183GVI4_HELPZ2.570e-750.00Uncharacterized protein n=1 Tax=Heligmosomoides po... [more]
A0A0K0CXP6_ANGCA5.490e-751.67Uncharacterized protein n=1 Tax=Angiostrongylus ca... [more]
A0A443SJD9_9ACAR6.200e-750.00Intersectin-2-like protein (Fragment) n=1 Tax=Lept... [more]
A0A1I7X785_HETBA6.640e-751.67Uncharacterized protein n=1 Tax=Heterorhabditis ba... [more]
A0A443RH56_9ACAR7.120e-751.61Intersectin-2-like isoform X13 n=1 Tax=Dinothrombi... [more]
UPI0006D519807.140e-754.55intersectin-1 n=1 Tax=Halyomorpha halys TaxID=2867... [more]
A0A0N4YXY0_NIPBR7.710e-750.00Dynamin-associated protein, putative (inferred by ... [more]
A0A0M8N146_9HYPO1.150e-646.99Putative calcium-binding protein n=1 Tax=Escovopsi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 29..57
e-value: 0.0094
score: 25.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 25..60
score: 11.64
IPR000261EH domainSMARTSM00027eh_3coord: 2..79
e-value: 6.6E-11
score: 52.2
IPR000261EH domainPFAMPF12763EF-hand_4coord: 7..60
e-value: 2.7E-10
score: 40.1
IPR000261EH domainPROSITEPS50031EHcoord: 19..84
score: 13.62
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 345..471
e-value: 1.4E-18
score: 68.9
NoneNo IPR availableGENE3D1.10.238.10coord: 1..79
e-value: 1.6E-20
score: 74.7
NoneNo IPR availablePANTHERPTHR11216EH DOMAINcoord: 2..154
NoneNo IPR availablePANTHERPTHR11216:SF61GH06923Pcoord: 2..154
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 352..456
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 38..50
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 6..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:87776..91169 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17020.1mRNA_C-linearis_contig96.17020.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 87776..91190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17020.1 ID=prot_C-linearis_contig96.17020.1|Name=mRNA_C-linearis_contig96.17020.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=480bp
MFQKLTTDGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEF
CAAMHLIGCVRKGEPLPELPKRTSENKLKKARTRHPPAAAVKPKGAERIK
GQIEPAKLSKRRSRLASLVESPDGDGPRTAIPESNESAIEEERIQGPVNE
KRETPAGGMIVGNGAIRAPDEYFQTSQTSAVESRDHGAPDRKRRPNLRQL
DAKDVDAVFAEDLGAINSLRDVQSWRVLVMGLQRLSAKDMSRRVQVKARP
QRRHTLPLATKGELVHKQEFLPGRGRRISLFGTAYDPAALFLKKRAERGS
TREVELEKDVAKAAAKWNLKPLVESAHRGANGATDAERGDGSRGNLSVAG
LPLLDEDIDVIAHLLRQNHAFNKLDLSRCFLSETQFVSLAQALAWNSRVQ
ELHLQECVFTDVGTAALADVLAVNNHIDSIDVRGCKGLDEKGIRQILTAA
RKKANLLKFNGMELATLRAESSDELDLSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR000261EH_dom
IPR032675LRR_dom_sf
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair