mRNA_C-linearis_contig96.17020.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig96.17020.1
Unique Name	mRNA_C-linearis_contig96.17020.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: D7G477_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G477_ECTSI)

HSP 1 Score: 473 bits (1218), Expect = 1.030e-160
Identity = 313/491 (63.75%), Postives = 351/491 (71.49%), Query Frame = 1

Query:    1 EHTKYKEMFQKLTT-DGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPELPKRTSENKLKKARTRHPPAAAVKPKGAERIKGQIEPAKLSKRRSRLASLVES-PDGDGPRTAIPESNESAIEEERIQGPVNEKRETPAGG---MIVGNGAIRAPDEYFQTSQTSAVESRDHGAPDRKRRPNLRQLDAKDVDAVFAEDLGAINSLRDVQSWRVLVMGLQRLSAKDMSRRVQVKARPQRRHTLPLATKGELVHKQEFLPGRGRRISLFGTAYDPAALFLKKRAERGSTREVELEKDVAKAAAKWNLKPLVESAHRGANGATDAERGDGSRGNLSVAGLPLLDEDIDVIAHLLRQNHAFNKLDLSRCFLSETQFVSLAQALAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGCKGLDEKGIRQILTAARKKANLLKFNGMELATLRAESSDELDLSG 1458
            EH +Y ++F+KL T DGYL G+RAV LL KSG+ Q+TL++VWALAD D DGRLS+KEFC AMHLIGC RKG PLPE+P R    K KK + R  P    KP+  +  K +I  AK  KRRSRLASLV+   D + P  +I +S+E  +   RI+        T  G    MI      R   E  Q  +  A ESRDHG   R RRPNLRQLD KDVDAVFAE  GAINSLRDVQSWRVLVMGLQRLS KDM+R V    RP+RRHTLPLA KG+L  KQ++LPGRGRR SL GTAY+PAALFLK+RAER S RE +LEKD AKAA KWNLKPL E + R  +   D E+   SRGNLSVAGLPLLDED+D+I HLLRQNHAF +LDLSRCFLSE QFVSLAQALAW        XXXXXXXXXXXXXXXXXXXXXXXX     RGCKGLDEK I+ IL  AR K NLL FNGM LA LRAE SDELDLSG
Sbjct:   16 EH-RYAKIFEKLDTEDGYLSGKRAVVLLRKSGVPQETLSKVWALADSDVDGRLSLKEFCTAMHLIGCFRKGLPLPEVPSR----KPKKPKKRQSPGGDTKPREGQG-KREITFAKSPKRRSRLASLVDPHQDANPPGASIAKSHEPLLPLSRIRKSATLWILTLCGSRSPMITSQWKSRRLKELRQ-HRKEAEESRDHGGQSRIRRPNLRQLDDKDVDAVFAEGPGAINSLRDVQSWRVLVMGLQRLSGKDMARHVPTNVRPRRRHTLPLAAKGDLARKQDYLPGRGRRTSLLGTAYEPAALFLKQRAERRSIREADLEKDTAKAAEKWNLKPLREKSERCES---DGEQ-TSSRGNLSVAGLPLLDEDVDIIVHLLRQNHAFKRLDLSRCFLSEKQFVSLAQALAWNSRIEELFXXXXXXXXXXXXXXXXXXXXXXXXHSLDVRGCKGLDEKSIKVILGGARSKGNLLTFNGMNLADLRAEGSDELDLSG 495

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A8J5X7G7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X7G7_DIALT)

HSP 1 Score: 72.4 bits (176), Expect = 1.290e-9
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 1

Query:    1 EHTKYKEMFQKLTT--DGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLP 222
            E  +Y   F  L T   G+L G +A  LL KSGL ++TL+R+W L+D D DGRLS +EF AAMHL     +G PLP
Sbjct:  171 EAARYDAYFASLDTARTGFLSGAQAAPLLSKSGLPKETLSRIWGLSDADRDGRLSQREFRAAMHLAMRTARGTPLP 246

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A443SJD9_9ACAR (Intersectin-2-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SJD9_9ACAR)

HSP 1 Score: 64.7 bits (156), Expect = 6.090e-9
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 1

Query:    1 EHTKYKEMFQKLT-TDGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKG 210
            + +KY+  F +L   +G + G++A  L  +SGL    LA++W LAD DADGR+ V EFC A+HLI    KG
Sbjct:   14 QKSKYESQFMRLQPVNGLITGDQAKGLFLQSGLPPSVLAKIWELADVDADGRMDVNEFCIALHLIALKLKG 84

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A443RH56_9ACAR (Intersectin-2-like isoform X13 n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A443RH56_9ACAR)

HSP 1 Score: 67.4 bits (163), Expect = 4.610e-8
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 1

Query:    1 EHTKYKEMFQKLTT-DGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKG 210
            + +KY+  F +L   +G + GE+A  L  KSGL  Q LA++W LAD DADGR+ V EFC A+HLI    KG
Sbjct:   15 QKSKYESQFFRLQPINGLITGEQAKGLFLKSGLPPQILAKIWELADVDADGRMDVNEFCIALHLIALKLKG 85

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: UPI0006D51980 (intersectin-1 n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D51980)

HSP 1 Score: 67.0 bits (162), Expect = 6.110e-8
Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 1

Query:   10 KYKEMFQKLTTD----GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLP 222
            KY ++F   TTD    GYL G +A ++L  S L Q  LA++WALAD DADGRLS +EF  A+HL    R GE LP
Sbjct:  394 KYTQLFN--TTDKARSGYLTGPQARTILLASKLPQPVLAQIWALADTDADGRLSCEEFVLALHLCDLARAGETLP 466

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A1I7X785_HETBA (Uncharacterized protein n=1 Tax=Heterorhabditis bacteriophora TaxID=37862 RepID=A0A1I7X785_HETBA)

HSP 1 Score: 66.6 bits (161), Expect = 7.460e-8
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 1

Query:   10 KYKEMFQKLTTD--GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPE 225
            +Y + F +L     G+L G    S +G SGL   TLA +W+L+D + DGRLSV EFC AMHLI   + G  LP+
Sbjct:  176 RYSQQFNQLDKQRMGFLSGSAGRSAMGMSGLPTPTLAHIWSLSDVNKDGRLSVDEFCIAMHLIDMCKAGFALPD 249

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A0N5AWI9_9BILA (Uncharacterized protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AWI9_9BILA)

HSP 1 Score: 65.9 bits (159), Expect = 1.370e-7
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 1

Query:    1 EHTKYKEMFQKLTTD--GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPE 225
            E  KY++ F +L     G L G  A ++L +S L   TLA VW L+D + DGRLSV+EFC AMHLI  V+ G  LP+
Sbjct:  191 EKLKYRQQFNQLDKQRTGALNGIHARNVLAQSQLPNVTLAEVWNLSDVNKDGRLSVEEFCIAMHLIDSVKSGYLLPK 267

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A074XA01_AURPU (Uncharacterized protein n=43 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A074XA01_AURPU)

HSP 1 Score: 65.5 bits (158), Expect = 1.770e-7
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 1

Query:    7 TKYKEMFQKLTTDGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVR 204
            T+Y  ++++    GYL GE+A ++  ++GL  +TL R+W LAD +  G L   EFC AMHLI C +
Sbjct:  144 TQYANLYEQSAGGGYLSGEQAKAIFERAGLPNETLGRIWQLADREGKGSLDKTEFCIAMHLITCYK 209

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A183GVI4_HELPZ (Uncharacterized protein n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183GVI4_HELPZ)

HSP 1 Score: 62.4 bits (150), Expect = 1.940e-7
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 1

Query:   46 GYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPE 225
            G+L G+   S LG SGL    LA +W L+D + DG+L+V EFC AMHLI  V+ G  LP+
Sbjct:   96 GFLTGQAGRSALGMSGLPTTALAHIWTLSDVNKDGKLTVDEFCIAMHLIDMVKAGYALPD 155

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BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Match: A0A0M8N146_9HYPO (Putative calcium-binding protein n=1 Tax=Escovopsis weberi TaxID=150374 RepID=A0A0M8N146_9HYPO)

HSP 1 Score: 65.1 bits (157), Expect = 2.250e-7
Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = 1

Query:   10 KYKEMFQKLTTDG-YLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEFCAAMHLIGCVRKGEPLPELPKRTSENKLKKARTRHPPAAAV 294
            +Y  +F++    G YL GE+A S+  KSGL+ +TL R+W LAD D  G L++ EF  AMHL+   + G  L  LP       L +A +R PPAAA 
Sbjct:  143 QYSSLFERQNLQGGYLPGEQARSIFDKSGLANETLGRIWGLADTDQRGALALPEFIIAMHLLTSTKTGS-LRALPNVLPPG-LYEAASRAPPAAAA 236

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot

BLAST of mRNA_C-linearis_contig96.17020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7G477_ECTSI	1.030e-160	63.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A8J5X7G7_DIALT	1.290e-9	50.00	Uncharacterized protein n=1 Tax=Diacronema lutheri...	[more]
A0A443SJD9_9ACAR	6.090e-9	45.07	Intersectin-2-like protein (Fragment) n=1 Tax=Lept...	[more]
A0A443RH56_9ACAR	4.610e-8	49.30	Intersectin-2-like isoform X13 n=1 Tax=Dinothrombi...	[more]
UPI0006D51980	6.110e-8	52.00	intersectin-1 n=1 Tax=Halyomorpha halys TaxID=2867...	[more]
A0A1I7X785_HETBA	7.460e-8	45.95	Uncharacterized protein n=1 Tax=Heterorhabditis ba...	[more]
A0A0N5AWI9_9BILA	1.370e-7	48.05	Uncharacterized protein n=1 Tax=Syphacia muris Tax...	[more]
A0A074XA01_AURPU	1.770e-7	42.42	Uncharacterized protein n=43 Tax=Aureobasidium pul...	[more]
A0A183GVI4_HELPZ	1.940e-7	50.00	Uncharacterized protein n=1 Tax=Heligmosomoides po...	[more]
A0A0M8N146_9HYPO	2.250e-7	42.71	Putative calcium-binding protein n=1 Tax=Escovopsi...	[more]

Pages

Relationships

The following CDS feature(s) are a part of this mRNA:

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930820.820363-UTR-C-linearis_contig96:91169..91190	1622930820.820363-UTR-C-linearis_contig96:91169..91190	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig96 91170..91190 -
1690881266.8869302-UTR-C-linearis_contig96:91169..91190	1690881266.8869302-UTR-C-linearis_contig96:91169..91190	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig96 91170..91190 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig96.17020.1	prot_C-linearis_contig96.17020.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig96 87776..91169 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig96:87776..91190-
coding sequence from alignment at C-linearis_contig96:87776..91190-

protein sequence of mRNA_C-linearis_contig96.17020.1

>prot_C-linearis_contig96.17020.1 ID=prot_C-linearis_contig96.17020.1|Name=mRNA_C-linearis_contig96.17020.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=480bp
MFQKLTTDGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEF
CAAMHLIGCVRKGEPLPELPKRTSENKLKKARTRHPPAAAVKPKGAERIK
GQIEPAKLSKRRSRLASLVESPDGDGPRTAIPESNESAIEEERIQGPVNE
KRETPAGGMIVGNGAIRAPDEYFQTSQTSAVESRDHGAPDRKRRPNLRQL
DAKDVDAVFAEDLGAINSLRDVQSWRVLVMGLQRLSAKDMSRRVQVKARP
QRRHTLPLATKGELVHKQEFLPGRGRRISLFGTAYDPAALFLKKRAERGS
TREVELEKDVAKAAAKWNLKPLVESAHRGANGATDAERGDGSRGNLSVAG
LPLLDEDIDVIAHLLRQNHAFNKLDLSRCFLSETQFVSLAQALAWNSRVQ
ELHLQECVFTDVGTAALADVLAVNNHIDSIDVRGCKGLDEKGIRQILTAA
RKKANLLKFNGMELATLRAESSDELDLSG*

mRNA from alignment at C-linearis_contig96:87776..91190-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig96.17020.1 ID=mRNA_C-linearis_contig96.17020.1|Name=mRNA_C-linearis_contig96.17020.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3415bp|location=Sequence derived from alignment at C-linearis_contig96:87776..91190- (Chordaria linearis ClinC8C monoicous)
GAGCACACAAAATACAAAGAGATGTTTCAAAAACTTACCACCGATGGGTA
TCTTGGTGGCGAACGAGCCGTGTCTCTACTGGGGAAGTCCGGCCTCTCCC
AGCAAACACTCGCGCGAGTGTGGGCCCTGGCAGACGGCGATGCCGATGGG
AGGTTAAGCGTGAAGGTGTGGTCTAGACTTAGACTGTGTTCTTGTGGACG
ACACGTTGCAAAGAAGTTGGCTCGGGTCTCTGTGAGAACACTACACTAGT
CAATTCAAGAGCCGTGCCATTATACTTCACCGAGCATACGCACCTGTGCC
TTTGTCGTCGCGTCCTCTGTTTTGTACAGCTGATGCAAACCTAAAACCTG
CTTCACGATTCTTTCCAATCAATGGTGGCATGTAGGAATTTTGCGCGGCG
ATGCATCTTATCGGATGCGTCCGCAAGGGAGAGCCGCTTCCAGAACTACC
GAAGAGGACTTCCGAGAACAAGTTGAAAAAGGCAAGGACACGGCATCCCC
CTGCTGCTGCTGTGAAGCCGAAAGGGGCCGAGAGAATAAAGGGCCAAATC
GAACCAGCCAAGTTATCAAAGCGACGATCCCGATTAGCGTCGCTGGTGGA
AAGTCCAGACGGTGATGGGCCACGTACTGCCATCCCGGAATCCAACGAGT
CCGCCATTGAAGAGGTAATCCTTAGCTAAGAATTTATCTGCCAATAGAGT
ATTGCAGTGGCAACATGTAGTTCTTTTGAGATATTTTTTTCCCGGGGTAA
GGAACAGAGAGCGCGCGTTCTGTACGTCCTCCGGAAAATTGATCGCAGAT
TTCCGTCTGCGGGCGGTGAGACTCAGTGCATCTCGATCTCAATTCATGAG
ACCGGCCTTGAAACGTCTTGTCGTCGCGTCCCCTCACGCATACCGATGAA
TCAGCCCAGTGATTTTATTTTAAAAGCTTTTAAACGTGCCTCTTTGCACC
TCGGTGTTACAGCACTTTTAAACTTGCTTCTTCGCGCCACCATGGCAATC
GTGCGACCGTTGCCGTTTAAATAAAGGATGGTCCCTATAATATATAACGA
AGCGTCTGTGAAACCTGATGTCCGCCACCTGAACCAACCAGGAGCGCATA
CAGGGACCAGTCAACGAAAAGAGGGAAACTCCTGCCGGAGGCATGATTGT
GGGGAACGGCGCAATACGGGCTCCAGATGAATATTTCCAAACCAGCCAAA
CTAGTGCAGTAGAGAGTCGGGATCATGGAGCGCCGGATCGTAAGCGTCGA
CCAAACCTTCGCCAGCTGGACGCCAAAGACGTCGACGCAGTATTCGCAGA
GGATCTAGGAGCAATCAACTCCCTCCGTGACGTGCAGGTGCATCGCTGCT
TTACTTCTTATGGCCCTTAGATCCTCTCTATGCCGAACCTGTCGCGCGTT
CTGACTGTAGCTTGGTTCCCGGAAACCACCTTCCGTGCTTCTCTTCCAGC
TCATGGTCAGCCTCGTTCACGTACTTCTTCGATGCAATTTTCTCTGCAGA
GTTGGCGCGTCCTCGTCATGGGTCTCCAAAGGCTGTCGGCGAAGGACATG
TCGCGTCGTGTACAGGTACGTGGACCTGTCGTAGCGCTTTCGTTTGTTCG
AGCTTTGAAATACAGACGGGATATGCAGGCAACGTATAGACGCGCCTCCG
CTGTACCTTAGAATGCTCGATAGTTGGTCTCGCGGACGGTCTGTGTACCA
CTACGCTTCGTGATCACCCTGCCCGGCCCTGCACTTGCTCTGAAAACTAC
TCACTGCTTTTCTGAAGGTGAAAGCGCGACCTCAACGACGACATACCTTA
CCACTAGCCACAAAAGGAGAGCTTGTGCACAAGCAGGAGTTTTTGCCAGG
CAGGGGCCGCAGAATAAGTCTATTTGGGACTGCCTACGACCCGGCTGCGT
TGTTTCTCAAGTGAGACCAAAGTAGCGACAACGTAGCCCTACACCCAAAT
AGAATGTATGCGACGATCATTGCAGTGCGTGGATCTAGGTCTGCACGCCC
CGCCCCCTCTCTGTATTCAGAGCTTGCTCTGTCGGCCGGGCCAAGACAAA
TTCGGTGTACGCTACTTGCGTGTTCGAAGGCGCACGTTTCTTAGGAAATT
GGCAAGGTTGTTGGCGTGAACTGTCGGCAGGAAGCGAGCGGAGAGAGGAA
GTACTCGCGAGGTGGAACTTGAAAAGGACGTCGCAAAGGCAGCTGCAAAA
TGGAACCTTAAACCCTTGGTAGAGAGCGCTCACAGGTGAGAGGTGGTTAC
CCAGGCGCTGTTGGAATAGCCCGGAGTCCTTGCGATGTTGGTTGCACTTG
ATCGCAAAAGCATTGCAGTGAACAGAACATGATGAAGGATACTGTTGACT
CATGCAATCGATGAACCAACGTGAAAAGGGGCGCAAATGGGGCTACCGAC
GCCGAACGAGGAGATGGATCCAGAGGCAACCTTAGTGTTGCTGGGCTGCC
ACTACTAGACGAGGATATTGACGTCATCGCCCATGTGAGCAAATCCTGTA
GCGCAGTTTTGCCGCTTGTGTCGTGCCCTTTACTTGTCGTTTAGTTTGTG
GCCCTATTAATAGTTGAATGCCACAAAGAAACAACAGCGTAGGAAGGTTA
AGGTTCTCAGCTGCCTACCACGAATGTGACGGGTCCCCATCCCTTTTTCT
GGCAACCTGTTCCATGCTCCAGCTGCTCAGGCAAAATCATGCCTTCAACA
AACTGGACCTGAGCAGATGCTTCTTGTCAGAAACGCAGTTTGTGTCACTG
GCGCAAGCTTTGGCGTGGAACTCTCGAGTACAAGAGGTGAGTTTAGACGC
AAAGTTGAACATGTGGCGAGAAGAGAAGTCGCCAGTTACAAGTGACGTAG
ATGTACTGCTGTAGTCATCCGAAGCGCGATGCCTCCCAGTACAAACGCGG
TGATACAACCCCCCTGACGCTGCTCTAAACCCTTTCGAACGAAAACTTGC
AGCTACACCTCCAAGAATGCGTCTTCACAGATGTGGGTACCGCGGCCCTA
GCGGACGTTCTGGCCGTGAACAACCACATCGATTCTATCGACGTCAGAGG
CTGTAAAGGTGGGTGTTTTCTTGAACCTTCACTTGTGAGAACATTTCTTA
GGTTTGCTTGCCCATCCCAACAAAGTGCCGCGGGCGACTCGAGCATGTAA
TACAGAATGACAATTGGTCAACGTGTCAGCATTCTACGGCAGCGCTACCA
AGGAATACCATCTCGCCGGGTAATGTTTTGCTTTCGATAACCGCTGGCTT
GCTGTGCCTTGCCATTCCTTCCTCCATTCTTGAGGCCTGGACGAGAAAGG
AATACGGCAAATCCTCACGGCTGCCCGAAAAAAGGCAAACCTGTTGAAGT
TCAACGGAATGGAGCTGGCTACCTTGCGTGCGGAAAGCTCGGACGAGCTG
GACTTGAGCGGGTGA

Coding sequence (CDS) from alignment at C-linearis_contig96:87776..91190-

>mRNA_C-linearis_contig96.17020.1 ID=mRNA_C-linearis_contig96.17020.1|Name=mRNA_C-linearis_contig96.17020.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2880bp|location=Sequence derived from alignment at C-linearis_contig96:87776..91190- (Chordaria linearis ClinC8C monoicous)
ATGTTTCAAAAACTTACCACCGATGGGTATCTTGGTGGCGAACGAGCCGT
GTCTCTACTGGGGAAGTCCGGCCTCTCCCAGCAAACACTCGCGCGAGTGT
GGGCCCTGGCAGACGGCGATGCCGATGGGAGGTTAAGCGTGAAGATGTTT
CAAAAACTTACCACCGATGGGTATCTTGGTGGCGAACGAGCCGTGTCTCT
ACTGGGGAAGTCCGGCCTCTCCCAGCAAACACTCGCGCGAGTGTGGGCCC
TGGCAGACGGCGATGCCGATGGGAGGTTAAGCGTGAAGGAATTTTGCGCG
GCGATGCATCTTATCGGATGCGTCCGCAAGGGAGAGCCGCTTCCAGAACT
ACCGAAGAGGACTTCCGAGAACAAGTTGAAAAAGGCAAGGACACGGCATC
CCCCTGCTGCTGCTGTGAAGCCGAAAGGGGCCGAGAGAATAAAGGGCCAA
ATCGAACCAGCCAAGTTATCAAAGCGACGATCCCGATTAGCGTCGCTGGT
GGAAAGTCCAGACGGTGATGGGCCACGTACTGCCATCCCGGAATCCAACG
AGTCCGCCATTGAAGAGGAATTTTGCGCGGCGATGCATCTTATCGGATGC
GTCCGCAAGGGAGAGCCGCTTCCAGAACTACCGAAGAGGACTTCCGAGAA
CAAGTTGAAAAAGGCAAGGACACGGCATCCCCCTGCTGCTGCTGTGAAGC
CGAAAGGGGCCGAGAGAATAAAGGGCCAAATCGAACCAGCCAAGTTATCA
AAGCGACGATCCCGATTAGCGTCGCTGGTGGAAAGTCCAGACGGTGATGG
GCCACGTACTGCCATCCCGGAATCCAACGAGTCCGCCATTGAAGAGGAGC
GCATACAGGGACCAGTCAACGAAAAGAGGGAAACTCCTGCCGGAGGCATG
ATTGTGGGGAACGGCGCAATACGGGCTCCAGATGAATATTTCCAAACCAG
CCAAACTAGTGCAGTAGAGAGTCGGGATCATGGAGCGCCGGATCGTAAGC
GTCGACCAAACCTTCGCCAGCTGGACGCCAAAGACGTCGACGCAGTATTC
GCAGAGGATCTAGGAGCAATCAACTCCCTCCGTGACGTGCAGGAGCGCAT
ACAGGGACCAGTCAACGAAAAGAGGGAAACTCCTGCCGGAGGCATGATTG
TGGGGAACGGCGCAATACGGGCTCCAGATGAATATTTCCAAACCAGCCAA
ACTAGTGCAGTAGAGAGTCGGGATCATGGAGCGCCGGATCGTAAGCGTCG
ACCAAACCTTCGCCAGCTGGACGCCAAAGACGTCGACGCAGTATTCGCAG
AGGATCTAGGAGCAATCAACTCCCTCCGTGACGTGCAGAGTTGGCGCGTC
CTCGTCATGGGTCTCCAAAGGCTGTCGGCGAAGGACATGTCGCGTCGTGT
ACAGAGTTGGCGCGTCCTCGTCATGGGTCTCCAAAGGCTGTCGGCGAAGG
ACATGTCGCGTCGTGTACAGGTGAAAGCGCGACCTCAACGACGACATACC
TTACCACTAGCCACAAAAGGAGAGCTTGTGCACAAGCAGGAGTTTTTGCC
AGGCAGGGGCCGCAGAATAAGTCTATTTGGGACTGCCTACGACCCGGCTG
CGTTGTTTCTCAAGTGAAAGCGCGACCTCAACGACGACATACCTTACCAC
TAGCCACAAAAGGAGAGCTTGTGCACAAGCAGGAGTTTTTGCCAGGCAGG
GGCCGCAGAATAAGTCTATTTGGGACTGCCTACGACCCGGCTGCGTTGTT
TCTCAAGAAGCGAGCGGAGAGAGGAAGTACTCGCGAGGTGGAACTTGAAA
AGGACGTCGCAAAGGCAGCTGCAAAATGGAACCTTAAACCCTTGGTAGAG
AGCGCTCACAGGAAGCGAGCGGAGAGAGGAAGTACTCGCGAGGTGGAACT
TGAAAAGGACGTCGCAAAGGCAGCTGCAAAATGGAACCTTAAACCCTTGG
TAGAGAGCGCTCACAGGGGCGCAAATGGGGCTACCGACGCCGAACGAGGA
GATGGATCCAGAGGCAACCTTAGTGTTGCTGGGCTGCCACTACTAGACGA
GGATATTGACGTCATCGCCCATGGGCGCAAATGGGGCTACCGACGCCGAA
CGAGGAGATGGATCCAGAGGCAACCTTAGTGTTGCTGGGCTGCCACTACT
AGACGAGGATATTGACGTCATCGCCCATCTGCTCAGGCAAAATCATGCCT
TCAACAAACTGGACCTGAGCAGATGCTTCTTGTCAGAAACGCAGTTTGTG
TCACTGGCGCAAGCTTTGGCGTGGAACTCTCGAGTACAAGAGCTGCTCAG
GCAAAATCATGCCTTCAACAAACTGGACCTGAGCAGATGCTTCTTGTCAG
AAACGCAGTTTGTGTCACTGGCGCAAGCTTTGGCGTGGAACTCTCGAGTA
CAAGAGCTACACCTCCAAGAATGCGTCTTCACAGATGTGGGTACCGCGGC
CCTAGCGGACGTTCTGGCCGTGAACAACCACATCGATTCTATCGACGTCA
GAGGCTGTAAAGCTACACCTCCAAGAATGCGTCTTCACAGATGTGGGTAC
CGCGGCCCTAGCGGACGTTCTGGCCGTGAACAACCACATCGATTCTATCG
ACGTCAGAGGCTGTAAAGGCCTGGACGAGAAAGGAATACGGCAAATCCTC
ACGGCTGCCCGAAAAAAGGCAAACCTGTTGAAGTTCAACGGAATGGAGCT
GGCTACCTTGCGTGCGGAAAGCTCGGACGAGCTGGACTTGAGCGGGTGAG
CCTGGACGAGAAAGGAATACGGCAAATCCTCACGGCTGCCCGAAAAAAGG
CAAACCTGTTGAAGTTCAACGGAATGGAGCTGGCTACCTTGCGTGCGGAA
AGCTCGGACGAGCTGGACTTGAGCGGGTGA