prot_C-linearis_contig96.17053.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17053.1
Unique Nameprot_C-linearis_contig96.17053.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length261
Homology
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BLAST of mRNA_C-linearis_contig96.17053.1 vs. uniprot
Match: D7G4B9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B9_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 4.870e-18
Identity = 77/185 (41.62%), Postives = 103/185 (55.68%), Query Frame = 0 
Query:   80 MAAVRGGSGGIEDELVGAAVQISELRQEKKRLTLARDSALVEIEEFKKIRVENSRQIQEHEARRAEVAATHAKELEDV-------KRNEREAIETAKKACAELQKRNEETTKLKTELSEAKAAAAETAAGPPV---NRRRVTATGLKPVSPGPVAAAAGGAGAPLRRGVRYAMDEGEEKDGNGGA 254
            MAA+RGG GGIED+L+GA  +IS+L +E K  T+ RD A    E        N+R ++ HE  R ++   HAKE+ED+       K+NEREAIETA+K  AEL+    E  K+KTEL                   NRRRVTA G++ +SP       GG   P   G +YAM++GE+ +G G A
Sbjct:    1 MAAMRGGRGGIEDDLIGAVKEISKLSKENK--TVKRDLASAVSE--------NARLVKTHEDSRKKLELAHAKEIEDMTKAIEDAKKNEREAIETAEKTFAELKNCTIEKEKIKTELGXXXXXXXXXXXXXXXXXXNRRRVTAIGVRQISP------VGGGAGPKGGGSQYAMEDGEDDNGRGTA 169
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4B9_ECTSI4.870e-1841.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..121
NoneNo IPR availableCOILSCoilCoilcoord: 151..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:577618..580007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17053.1mRNA_C-linearis_contig96.17053.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 577617..580007 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17053.1 ID=prot_C-linearis_contig96.17053.1|Name=mRNA_C-linearis_contig96.17053.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=261bp
HETGASRFVPLCFLAAISRGLERQHLTRCSASVHSAGKEGKKTACCGSFK
GREIDERGKPTLDSARAFVGRPAQQQQQTMAAVRGGSGGIEDELVGAAVQ
ISELRQEKKRLTLARDSALVEIEEFKKIRVENSRQIQEHEARRAEVAATH
AKELEDVKRNEREAIETAKKACAELQKRNEETTKLKTELSEAKAAAAETA
AGPPVNRRRVTATGLKPVSPGPVAAAAGGAGAPLRRGVRYAMDEGEEKDG
NGGAVDETEDG
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