prot_C-linearis_contig95.16993.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig95.16993.1
Unique Nameprot_C-linearis_contig95.16993.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length128
Homology
[Close]
BLAST of mRNA_C-linearis_contig95.16993.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 2.640e-7
Identity = 30/55 (54.55%), Postives = 35/55 (63.64%), Query Frame = 0 
Query:   72 DRVLPIEEVRVEPSRRECDLEGRPFPVARMTTTNGAPTATRPADDRQCHLVFTGL 126
            D  LP+E+V +EPSR ECD EGRP P       +G P     + DRQCHLVFTGL
Sbjct:  367 DGHLPMEKVVIEPSRNECDFEGRPTPPT--DPKSGEPPIPS-STDRQCHLVFTGL 418
[Close]
BLAST of mRNA_C-linearis_contig95.16993.1 vs. uniprot
Match: D7G7N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N5_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 7.070e-6
Identity = 47/125 (37.60%), Postives = 66/125 (52.80%), Query Frame = 0 
Query:   10 QHFGAQEALFGLGPSFPAVQPPLGGQPFK------SENGESSGSFGFGGPDFSAREGSGNSDSADGGGDRVLPIEEVRVEPSRRECDLEGRPFPVARMTTTNGAPTATRPADDRQCHLVFTGLEE 128
            QH GA+  + G  PS  A +PPL   P         ++G+ SG    G    S+   S + D+   G    LP+ +V VE SR+ECDLEGRP  + R+  +    TA+ P D R+ H+ FTGLE+
Sbjct:   32 QHVGARVTVSGKRPSSDAAEPPLEIPPHGLGLVGCGDSGDGSGGTASGVDSLSSTPES-SWDAELVGDFGRLPMGDVVVEVSRKECDLEGRP--ITRIGNSLTPITASSP-DVRESHIEFTGLEK 152
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ48_ECTSI2.640e-754.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G7N5_ECTSI7.070e-637.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:413760..414541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16993.1mRNA_C-linearis_contig95.16993.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig95 413760..414541 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig95.16993.1 ID=prot_C-linearis_contig95.16993.1|Name=mRNA_C-linearis_contig95.16993.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=128bp
HHHEHQHQPQHFGAQEALFGLGPSFPAVQPPLGGQPFKSENGESSGSFGF
GGPDFSAREGSGNSDSADGGGDRVLPIEEVRVEPSRRECDLEGRPFPVAR
MTTTNGAPTATRPADDRQCHLVFTGLEE
back to top