prot_C-linearis_contig95.16981.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig95.16981.1
Unique Name	prot_C-linearis_contig95.16981.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	190

Homology

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BLAST of mRNA_C-linearis_contig95.16981.1 vs. uniprot
Match: D7FLY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY5_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.350e-72
Identity = 125/193 (64.77%), Postives = 144/193 (74.61%), Query Frame = 0

Query:    1 MVDPAESSKRLEMHVKRMSRVQVSEEPTPD-GMRSNMASPDVAYVGSMLGEEEGFPTGVSRMRRRVLEAPLGPKIGYHELEDEKEEGDEEWMTGEASQLSGAGTRGSSNWVLKIMLPIFLIIGIIILHNWWTDIKKHASNAAKGVGDVFDRRALTLALQKEQEEQARPAEGAGQGL--GQAGAKAREAGLPDK 190
            MVD   SSKRLEM VK +S V V+EEP P     +NMASPDV ++GSM+GEE+ FPTG  +MRRRV+E PLG KIGYHELEDEKE+ DEEWMTGEASQ+SG GTRGS+NWVLK++ PI LI+GII +HNWWTD+K H SNAAK V DVFDRRAL      E+EE    AEG GQG   G+ G    E  LPDK
Sbjct:    1 MVDREASSKRLEMRVKTLSSVTVAEEPNPSRDAATNMASPDVDHIGSMVGEEDAFPTG--QMRRRVIEPPLGSKIGYHELEDEKEDADEEWMTGEASQVSGGGTRGSNNWVLKVLFPILLIVGIICMHNWWTDVKYHVSNAAKAVSDVFDRRALL-----EEEE----AEGRGQGRFSGEEGGAVSEP-LPDK 181

[Close]

BLAST of mRNA_C-linearis_contig95.16981.1 vs. uniprot
Match: A0A6H5JNP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP4_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 4.890e-70
Identity = 123/192 (64.06%), Postives = 141/192 (73.44%), Query Frame = 0

Query:    1 MVDPAESSKRLEMHVKRMSRVQ-VSEEPTPD-GMRSNMASPDVAYVGSMLGEEEGFPTGVSRMRRRVLEAPLGPKIGYHELEDEKEEGDEEWMTGEASQLSGAGTRGSSNWVLKIMLPIFLIIGIIILHNWWTDIKKHASNAAKGVGDVFDRRALTLALQKEQEEQARPAEGAGQGLGQAGAKAREAGLPDK 190
            MVD   SSKRLEM VK +S V  V+EEP P     +NMASPDV ++GSM+GEE+ FPTG   MRRRV+E PLG KIGYHELEDEKE+ DEEWMTGEASQ+SG GTRGS+NW+LK++ PI LI+GII +HNWWTD+K H SNAAK V DVFDRRAL      E+EE    AEG GQG       A  A LPDK
Sbjct:    1 MVDREASSKRLEMRVKSLSSVTAVAEEPNPSRDAATNMASPDVDHIGSMVGEEDAFPTG---MRRRVIEPPLGSKIGYHELEDEKEDADEEWMTGEASQVSGGGTRGSNNWMLKVVFPILLIVGIICMHNWWTDVKYHVSNAAKAVSDVFDRRALL-----EEEE----AEGRGQGRFSEEEGAVSAPLPDK 180

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig95.16981.1 vs. uniprot

BLAST of mRNA_C-linearis_contig95.16981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FLY5_ECTSI	1.350e-72	64.77	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JNP4_9PHAE	4.890e-70	64.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 131..190
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 109..130
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..108
None	No IPR available	TMHMM	TMhelix		coord: 109..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig95	contig	C-linearis_contig95:292110..296738 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig95.16981.1	mRNA_C-linearis_contig95.16981.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig95 291860..296738 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig95.16981.1 ID=prot_C-linearis_contig95.16981.1|Name=mRNA_C-linearis_contig95.16981.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=190bp
MVDPAESSKRLEMHVKRMSRVQVSEEPTPDGMRSNMASPDVAYVGSMLGE
EEGFPTGVSRMRRRVLEAPLGPKIGYHELEDEKEEGDEEWMTGEASQLSG
AGTRGSSNWVLKIMLPIFLIIGIIILHNWWTDIKKHASNAAKGVGDVFDR
RALTLALQKEQEEQARPAEGAGQGLGQAGAKAREAGLPDK