prot_C-linearis_contig95.16970.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig95.16970.1
Unique Name	prot_C-linearis_contig95.16970.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	733

Homology

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BLAST of mRNA_C-linearis_contig95.16970.1 vs. uniprot
Match: A0A6H5KYN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYN5_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 5.030e-57
Identity = 182/411 (44.28%), Postives = 201/411 (48.91%), Query Frame = 0

Query:    1 MPDFLPADVLYMVCCSGYANPCK---LRMVCLSVSNACREQSPWTLVAAPGLPLELLSRHLRGGDRLLLRQHQPGTRAPVRAEDATAAAAGRGRCSDSGSDSDWVGHAASNAVVPEGEXXXXRKGKGDPSSAP------NSFGHAAGDAIIAGGDRSSEPRSTTAAAYGTPSHPADATAPLSISRLSPRRLIQRVVIDRSISLEGVVWPARVTSLEMGEEGVRVS-----------EVADGGVRWGRVFAGGRVSATRITRACPEAALAXXXXXXXXXXXXXXRFTRAIKIVGDSAPVVDATLEPEANRAPAPTATETFWAGKVGGTCFDRPLREVSLPPALVHLELLGPFNGPLEGVEWPLSLETLVLGELFNQSLSRDNDSDGGGVLLPRGLKSLTLGSAFDRCLDDVA 391
            MP  L  D+L +V CSGYA P     L  VCL+V NACREQ+PWTL AAPG+P  LLS HLRGGDRLLL++     R                       D  WVGHAA  AV     XXXX                 N+    AG   +  G                             SRLSPR  IQRVV+D S+SL+GVVWPAR+T+LEMGEE                 VA  G    +    G  S              XXXXXXXXXXXXXX                               AT  FWAGK  G+CFD PLREVSLPP L+HLELLGPFN  LEGV WP SLETLVLG+LFN SL       G GV+LPRGLKSLTLGSAFD  LD VA
Sbjct:    1 MPGILAGDILAIVWCSGYAGPAAATPLETVCLAVCNACREQTPWTLRAAPGMPPSLLSWHLRGGDRLLLQRFDQRGRXXXXXXXXXXX-----------HDRGWVGHAAKPAVTTAXXXXXXXXXXXXXXXXXXXXXXXNTVDGKAGVVAVRTGVEEXXXXXXXXXXXXXXXXXXXXXXXAGASRLSPRANIQRVVVDLSLSLDGVVWPARLTALEMGEEXXXXXXXXXXXXXXXXSVAHPGNLENKPSRRGHCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------ATARFWAGKPPGSCFDTPLREVSLPPTLLHLELLGPFNDSLEGVAWPPSLETLVLGDLFNGSL-------GDGVVLPRGLKSLTLGSAFDMSLDAVA 381

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BLAST of mRNA_C-linearis_contig95.16970.1 vs. uniprot
Match: D7FNE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE9_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.740e-45
Identity = 159/391 (40.66%), Postives = 181/391 (46.29%), Query Frame = 0

Query:    1 MPDFLPADVLYMVCCSGYANPC----KLRMVCLSVSNACREQSPWTLVAAPGLPLELLSRHLRGGDRLLL-RQHQPGTRAPVRAEDATAAAAGRGRCSDSGSDSDWVGHAASNAVVPEGEXXXXRKGKGDPSSAPNSFGHAAGDAIIAGGDRSSEPRSTTAAAYGTPSHPADATAPLSI-------------SRLSPRRLIQRVVIDRSISLEGVVWPARVTSLEMGEEGVRVSEVADGGVRWGRVFAGGRVSATRITRACPEAALAXXXXXXXXXXXXXXRFTRAIKIVGDSAPVVDATLEPEANRAPAPTATETFWAGKVGGTCFDRPLREVSLPPALVHLELLGPFNGPLEGVEWPLSLETLVLGELFNQSLSRDNDSDGGGVLLPRG 373
            MP  L +D+L +V  SGYA P      L  VCL+V NACREQ+PW L AAPG+P  LLS HLRGGDRLLL R  Q G                         D  WVGH A  AV         R+               AG  ++  G         T                                SRLSPR  IQRVV+   +SL+GVVWPAR+T+LEMGEE                                      XXXXXXXXXXXXXX               + A+ EP    A    AT  FWAGK  G+CFD PLREVSLPP L+HLELLGPFN PLEG+ WP SLETLVLG+LFN +L       G GV+LPRG
Sbjct:    1 MPGILASDILAIVWVSGYAGPAAAAASLETVCLAVCNACREQTPWALRAAPGMPPWLLSWHLRGGDRLLLQRSAQRGXXXXXXXXXXXXX------------DRGWVGHTALPAVT----TAATREXXXXXXXXXXXXNGKAGVIVVRAGVEEDRDGLDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLSPRANIQRVVVGLGLSLDGVVWPARLTALEMGEEXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITAS-EPATIGAATAAATARFWAGKPPGSCFDTPLREVSLPPTLLHLELLGPFNDPLEGIAWPPSLETLVLGDLFNGTL-------GDGVVLPRG 355

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig95.16970.1 vs. uniprot

BLAST of mRNA_C-linearis_contig95.16970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KYN5_9PHAE	5.030e-57	44.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FNE9_ECTSI	1.740e-45	40.66	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008615	FNIP	PFAM	PF05725	FNIP	coord: 581..622 e-value: 3.1E-5 score: 24.0 coord: 471..513 e-value: 2.2E-4 score: 21.3 coord: 537..580 e-value: 2.6E-9 score: 37.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 317..662 e-value: 9.3E-12 score: 46.0
None	No IPR available	PANTHER	PTHR32134:SF114	INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATED	coord: 436..650
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 309..427
None	No IPR available	PANTHER	PTHR32134:SF114	INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATED	coord: 309..427
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 313..505
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 436..650
None	No IPR available	PANTHER	PTHR32134:SF114	INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATED	coord: 313..505
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 338..640

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig95	contig	C-linearis_contig95:201364..206040 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig95.16970.1	mRNA_C-linearis_contig95.16970.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig95 201364..207421 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig95.16970.1 ID=prot_C-linearis_contig95.16970.1|Name=mRNA_C-linearis_contig95.16970.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=733bp
MPDFLPADVLYMVCCSGYANPCKLRMVCLSVSNACREQSPWTLVAAPGLP
LELLSRHLRGGDRLLLRQHQPGTRAPVRAEDATAAAAGRGRCSDSGSDSD
WVGHAASNAVVPEGEGEGERKGKGDPSSAPNSFGHAAGDAIIAGGDRSSE
PRSTTAAAYGTPSHPADATAPLSISRLSPRRLIQRVVIDRSISLEGVVWP
ARVTSLEMGEEGVRVSEVADGGVRWGRVFAGGRVSATRITRACPEAALAA
FSAATAATAATAARFTRAIKIVGDSAPVVDATLEPEANRAPAPTATETFW
AGKVGGTCFDRPLREVSLPPALVHLELLGPFNGPLEGVEWPLSLETLVLG
ELFNQSLSRDNDSDGGGVLLPRGLKSLTLGSAFDRCLDDVAWPPGLAHLQ
LGHSFNQDIGGVRWPSTLREIYFGDLFRCPITQVAWPESLKHLEFGHLFR
QPLVGVSWPRGLEELKFGGYYNCSLEDTELPEGLRALDLGRSFNRAITDT
RFPDGLQLLTLGDSFNQPVAGVRWPSGLRVLHFGSNFNQEIEGTDFPENL
ERLTFRQRFDRPIEKAKWPKSLKVLKFGNCFDRPIERVQWPPKLEILVLG
HYFNHPIQHLKLPGTLRRLAFGGIFDQPLDRVKWPENLESVELGHSFSRG
VAGVKWPRPLKRNPNLGGAPRMDEGGLLSLSGGGANGHVADPYAAPELGR
RRRRRRGRRGRGAGMAAGCCGGGDTGGAGGGDG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008615	FNIP
IPR032675	LRR_dom_sf