prot_C-linearis_contig95.16966.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig95.16966.1
Unique Nameprot_C-linearis_contig95.16966.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1093
Homology
BLAST of mRNA_C-linearis_contig95.16966.1 vs. uniprot
Match: D8LLI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI9_ECTSI)

HSP 1 Score: 972 bits (2514), Expect = 0.000e+0
Identity = 631/1114 (56.64%), Postives = 723/1114 (64.90%), Query Frame = 0
Query:    1 MHSVYNMG--EFGKPNFGDLGKPMITVDVARLQTELRAMHQRIEMLEVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTETRAHVDELDGASVADDSTAGTNVE--PPSPLLRSATGLRKKNAAANAALHAEVRELSTRIESLAASSSRREKAQSVRDKAVALSRSMEIKRVQLAIESRVTSDDLQLTVSATDDKIAAVQSSLDSALSDRFRRMQDV----MASLLGMVQALTQQHGKGMHGGGSHALMRGMTSGAGXXXXXXXXXXXXXXXXXXXXXXKASFERAVTEVLNRVMEDAEKKMGGRRGGVQNAAFQSLQEDYEAFKEHMEEKADRQDAISSALEGAQTRLEDAEANIVALTEELEHSAQETQEGMDAASERLSKLDAQLLTAASVAAEATRECAAIRVMVGESRREVQAEARQDAEAIAGRAEGRVKAEVNKVRGDARAATESLASELKRYIKRAEDEAEGYQGAIAATRALSEKATSGAAAAAARAEESDALLQRAERRIGQRLDEAIQNQATVAEDTLERVASGESEVARVESELRRLLSSNKAGIDNLRTAQTQQGISSERVLEDLRAEVQESLATSIIE---------VRATALRIARVSGPPEASSVGSRTGGGXVTFXXXXXXXXXXXXXXXXXXXXXXXGRPSLLSLGAALRRQNEDTALKVLTLQRSGVGTVTVLRKMEAAVHALSTKDLFWKAVDTKLVAHQRAVSDICLQVEGATVAKRSKITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLEGPEQTGQDWDERVEFLRQTQMRRFLNDCRETLDKTAPEARTNFNGEEIRGKFLGKLSDSLRVALSKYSPATPGATLFGKIKLKAKACLACDRPFMPSATGHPGPTPPGGIAGAAVEPDGLPEENSHITKDTFRPHTSHGRLGSPSRSSSVELFEPQRSIHSVMSGGRSSPESPHVYRGGFKLPKHLKSPLHLPGEGEDGSAFGIGHASPLLHKCPSMTGLDSHND-GRPSTSGGVRRKRRLPS--NYHPSPPATASGGRMITGGLDGGG-SIVSAFTVRTNDGAVCGGANDPAFAFFAGGESGQRQVLPYYAKSHTLSRPSTPHENSVRLL 1093
             +SVY MG  +   PNF DLGKP +TVDV RLQ ELRA+HQR+E LEVAA                               V        DELDG  +ADD T  T     P SP++RSATGLRKK AAA+AA+ AEVR+LS R+E+LA+S  RREKAQ +R+K  AL++SMEIKR+Q+AIESRVTSDDLQL VSA DDKI AVQSS++SALSDRFRRMQDV    MASLL MVQ LTQ   +   G G +   RG  SG G XXXXXXXXXXXXX          +F +AV + + RV+++     G  +G V+ A F+SLQEDY        EKADRQDAISS+LE AQ      EAN+ AL EELEHS+Q+T                               CAA+R++VG+SRRE QA+ARQ+AEAI  RA                +ATE + SELKR+IK++EDEAEG+QGA+A TRALSEKA +GA AAAARA+E DALLQ+AE R+G+RLD+A+QNQ T  EDTLERVA+GESE+AR ESELRRL++SN A I +LRT Q+  G SSE+  E LR EVQ++L T +I+                  R           +  GG                             R SL  LG ALRRQ ED A  V TLQRS VG VTVLRKMEA VHALSTKDLFWKAVD KL AHQRAV ++CL VE ATV++RS+ITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKL+ PEQTGQDWDERVEFLRQTQMRRFL DCR+ LDKTAPE RTNFNGEEIRGKF+GKLSD+L+VALSKYSP TPGATLFGKIKLK                                        NSHITKDTFRPHTSHGRLGSPSRS S+ELFEP  SIHSVMSG RSS  SPHVYRGGFKLPKHLKSPLHLP +GED SAFGIGHASPLLHK  SMTGL SHN+ GRPSTSGGVR+KRR P+   +H S P     G    G  DGGG SI+SAFT RT   A    A +         +      +PY+A SHT SRP   H+ SVRLL
Sbjct:    8 QYSVYPMGAAKAAAPNFSDLGKPTVTVDVTRLQAELRALHQRLEFLEVAA---QVAAVEHAKDQDPDGGSASSTAESIPSAVAAGRETRPDELDGGCIADDLTTETKAGEMPHSPVMRSATGLRKKAAAASAAMQAEVRDLSDRLEALASSCKRREKAQGIREKTNALAQSMEIKRIQMAIESRVTSDDLQLAVSAADDKIVAVQSSVESALSDRFRRMQDVVHQQMASLLSMVQGLTQSQAR-RKGSGPYVNARGNLSGGGYXXXXXXXXXXXXXASEAE-----TFNKAVKDAVERVLQEGRISGGSGQGDVKMADFESLQEDYXXXXXXXXEKADRQDAISSSLEDAQXXXXXXEANLSALAEELEHSSQDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAALRLLVGDSRREGQADARQEAEAITARAXXXXXXXXXXXXXXXXSATEKVGSELKRHIKKSEDEAEGFQGAVAGTRALSEKAMAGATAAAARADECDALLQKAETRMGKRLDKAVQNQTTAIEDTLERVAAGESELARAESELRRLIASNGAEIMDLRTGQSVLGESSEQATEQLREEVQDALTTMVIDQDFIDSPSSXXXXXXXXXRTGXXXXXXGSDNSRGGVRFEASHGGGSGNNYRSNDFVDRSASDVARLSLAHLGTALRRQGEDAAQMVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLDTPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLK----------------------------------------NSHITKDTFRPHTSHGRLGSPSRSGSIELFEPHSSIHSVMSGSRSSSHSPHVYRGGFKLPKHLKSPLHLP-DGEDQSAFGIGHASPLLHKSQSMTGLGSHNNNGRPSTSGGVRQKRRPPNAGKFHTSSPPATGDGDPDAGLQDGGGNSIISAFTARTEYAAATPNAGESGAERLGFDDPPAGTSMPYFATSHTPSRPGVQHDGSVRLL 1071          
BLAST of mRNA_C-linearis_contig95.16966.1 vs. uniprot
Match: A0A836CLL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL5_9STRA)

HSP 1 Score: 198 bits (504), Expect = 3.560e-48
Identity = 139/337 (41.25%), Postives = 180/337 (53.41%), Query Frame = 0
Query:  655 LRRQNEDTALKVLTLQRSGVGTVTVLRKMEAAVHALSTKDLFWKAVDTKLVAHQRAVSDICLQVEGATV------------------AKRSKITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLEGPEQTGQDWDERVEFLRQTQMRRFLNDCRETLDKTAPEARTNFNGEEIRGKFLGKLSDSLRVALSKYSPATPGATLFGKIKLKAKACLACDRPFMPSATGHPGPT--PPGGIAGAAVEPDGLPEENSHITKDTFRPHTSHGRLGSPSRSSS--VEL------FEPQRSIHSVMSG----------GRSSPESP--HVYRGGFKLPKH 951
            LR    + A  +  LQRSGV     LR++E A  +L++K LFW++ D KL AH   V+ + LQVE A                    A      L+ +A   LAG+ QRVAKL+A KADYEVIR +++ E P   G DWD RVE LR   + +F  D R  L K AP        E  RG+FL ++  +LRVALSKY P TPGATLFG++++ A+AC+ACDRPF  +A G P     PPGG   AA +P  LP E S   ++ FRP T     GSP++ S   VE+       E +  +H    G            S  + P  +VYRGGFKLPKH
Sbjct:  699 LRAHAAEGADALEALQRSGVANALALRRVETAFQSLASKGLFWESTDIKLAAHVEEVARVSLQVEAAAXXXXXXXXXXXXXXXXXXSAPPGAPHLAPDALRVLAGNTQRVAKLIAAKADYEVIRLVSRAEDPGAEGHDWDARVETLRGAFLAQFSADARNVLRKRAPHQGPA--AEAARGRFLARVDGALRVALSKYRPTTPGATLFGRVRVVAQACVACDRPFATAADGLPCAVSAPPGGNH-AAAKPPALPTETSIAVRNNFRPSTC---TGSPTKRSGGGVEVNGDDGDVESEVPLHVAPFGFGXXXXXXXXXXSDVQKPQAYVYRGGFKLPKH 1029          
BLAST of mRNA_C-linearis_contig95.16966.1 vs. uniprot
Match: A0A7S3USE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USE9_HETAK)

HSP 1 Score: 142 bits (358), Expect = 2.840e-34
Identity = 95/242 (39.26%), Postives = 137/242 (56.61%), Query Frame = 0
Query:  644 GRPSLLSLGAA-LRRQNEDTALKVLTLQRSGVGTVTVLRKMEAAVHALSTKDLFWKAVDTKLVAHQRAVSDICLQVEGATVAKRSKITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLEGPEQTGQDWDERVEFLRQTQMRRFLNDCRETLDKTAPEARTNFNGEEI----RGKFLGKLSDSLRVALSKYSPATPGATLFGKIKLKAKACLACDRPFMPSATGHPGPTPPGGIAGAA 880
            G+ +LL  G A LRR+           +RS VG   + R+ E  V A+++K LFW+A+  +L AH +   D C ++E  + A  +  +LS EAQ  LAG+ QRVAKL+  +AD+E IR+++    PE   +DWD +V+ LRQ     F      T    A  A+ + +G+ +    R +FL KL  ++R+ALSK++   PG TLFGK   +  AC+ACDRPF    T  PGP    G+AGAA
Sbjct:   12 GQQALLEGGLAELRRRARAAEESCGRTERSSVGLAALCRQAEGQVRAIASKSLFWEALQARLQAHLKGFGDRCCELEANSSAAHA-FSLSPEAQRYLAGNAQRVAKLVGQRADFETIRQVSTSRHPED--EDWDTKVDQLRQKYRAEF------TQGVEAYAAKQHRSGDTVVLDTRRRFLAKLDQAVRLALSKFNKVQPGLTLFGKRSAQVPACMACDRPF----TSDPGP----GLAGAA 236          
BLAST of mRNA_C-linearis_contig95.16966.1 vs. uniprot
Match: D8LS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS35_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 2.480e-18
Identity = 63/178 (35.39%), Postives = 102/178 (57.30%), Query Frame = 0
Query:  651 LGAALRRQNEDTALKVLTLQRSGVGTVTVLRKMEAAVHALSTKDLFWKAVDTKLVAHQRAVSDICLQVEGATVAKRSKITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLEGPEQTGQDWDERVEFLRQTQMRRFLNDCRETLDKTAPEARTNFNGEEIRGKFLGKLSDSLRV 828
            +  A+R Q +        ++R+ +    +++K+E ++  LS++DLFW+ V TKL AH  A +D   +VE AT  ++ +  L+ E Q  +AG+ QRVAKL+  KAD+EVI++L      E+  QDWD RV+ +R + +  F+ + R  LD+  P +   F G   R +F  KL   L+V
Sbjct:  545 VATAVREQQQRREESSRRVERANLSLTLLVKKLERSLFVLSSRDLFWEEVGTKLKAHAEAFADASCRVE-ATSEEQDRFVLTVELQQYIAGNTQRVAKLICQKADFEVIQKLTASTNIEKGAQDWDRRVQSMRGSFLEHFVANARRYLDRKYP-SHGPF-GARNRDRFFVKLEQGLKV 719          
BLAST of mRNA_C-linearis_contig95.16966.1 vs. uniprot
Match: W7TB27_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB27_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.560e-13
Identity = 67/233 (28.76%), Postives = 110/233 (47.21%), Query Frame = 0
Query:  646 PSLLSLGAALRRQNEDTALKVLTLQRSGVGTVTVLRKMEAAVHALSTKDLFWKAVDTKLVAHQRAVSDIC-----------------LQVEGATVAKRSKITLSKEAQACLAGDMQRVAKLMAVKADYEVIRELAKLEGPEQTGQDWDERVEFLRQTQMRRFLNDCRETLDKTAPEARTNFNGEEIRGKFLGKLSDSLRVALSKYSPATPGATLFGKIKLKAKA-CLACDRPF 860
            PS+  L   L  Q  ++  ++L L++   G      ++  +V AL T+   W A+D +L  +  ++   C                 LQ++G        + L KE    +A    R+AK +A+KADY++IR   + +    T    D ++   R+T + RFL   +  ++             EI  +F  KL  ++R+ALSK+S    G +LFGKI L+A+A CLAC+R F
Sbjct:   72 PSIPDLLTQLDVQRTESTDQLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLSSYGPDQVLQLQG------RGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDT-LTDNQCDAKILQSRETYLMRFLGGVKRAVEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQF 297          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LLI9_ECTSI0.000e+056.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CLL5_9STRA3.560e-4841.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3USE9_HETAK2.840e-3439.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LS35_ECTSI2.480e-1835.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TB27_9STRA7.560e-1328.76Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 444..478
NoneNo IPR availableCOILSCoilCoilcoord: 486..506
NoneNo IPR availableCOILSCoilCoilcoord: 311..384
NoneNo IPR availableCOILSCoilCoilcoord: 27..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:116722..131133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16966.1mRNA_C-linearis_contig95.16966.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig95 116719..131133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig95.16966.1 ID=prot_C-linearis_contig95.16966.1|Name=mRNA_C-linearis_contig95.16966.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1093bp
MHSVYNMGEFGKPNFGDLGKPMITVDVARLQTELRAMHQRIEMLEVAAVV
AAEERQKEEDLDGGSGSSAFGGAASTTAAVTTETRAHVDELDGASVADDS
TAGTNVEPPSPLLRSATGLRKKNAAANAALHAEVRELSTRIESLAASSSR
REKAQSVRDKAVALSRSMEIKRVQLAIESRVTSDDLQLTVSATDDKIAAV
QSSLDSALSDRFRRMQDVMASLLGMVQALTQQHGKGMHGGGSHALMRGMT
SGAGGNGDSDGLGAGDSDEDDEDENEKASFERAVTEVLNRVMEDAEKKMG
GRRGGVQNAAFQSLQEDYEAFKEHMEEKADRQDAISSALEGAQTRLEDAE
ANIVALTEELEHSAQETQEGMDAASERLSKLDAQLLTAASVAAEATRECA
AIRVMVGESRREVQAEARQDAEAIAGRAEGRVKAEVNKVRGDARAATESL
ASELKRYIKRAEDEAEGYQGAIAATRALSEKATSGAAAAAARAEESDALL
QRAERRIGQRLDEAIQNQATVAEDTLERVASGESEVARVESELRRLLSSN
KAGIDNLRTAQTQQGISSERVLEDLRAEVQESLATSIIEVRATALRIARV
SGPPEASSVGSRTGGGGVTFGSHGGSSRHTTNNKNNNNNNNNNGRPSLLS
LGAALRRQNEDTALKVLTLQRSGVGTVTVLRKMEAAVHALSTKDLFWKAV
DTKLVAHQRAVSDICLQVEGATVAKRSKITLSKEAQACLAGDMQRVAKLM
AVKADYEVIRELAKLEGPEQTGQDWDERVEFLRQTQMRRFLNDCRETLDK
TAPEARTNFNGEEIRGKFLGKLSDSLRVALSKYSPATPGATLFGKIKLKA
KACLACDRPFMPSATGHPGPTPPGGIAGAAVEPDGLPEENSHITKDTFRP
HTSHGRLGSPSRSSSVELFEPQRSIHSVMSGGRSSPESPHVYRGGFKLPK
HLKSPLHLPGEGEDGSAFGIGHASPLLHKCPSMTGLDSHNDGRPSTSGGV
RRKRRLPSNYHPSPPATASGGRMITGGLDGGGSIVSAFTVRTNDGAVCGG
ANDPAFAFFAGGESGQRQVLPYYAKSHTLSRPSTPHENSVRLL
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