prot_C-linearis_contig95.16991.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig95.16991.1
Unique Nameprot_C-linearis_contig95.16991.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length889
Homology
BLAST of mRNA_C-linearis_contig95.16991.1 vs. uniprot
Match: A0A6H5LAM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAM6_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.360e-32
Identity = 92/196 (46.94%), Postives = 113/196 (57.65%), Query Frame = 0
Query:    1 MSQRLGDGKWVDVNGDNIGIQVYPRASPGKSRGTASPSSSTGGSGVFISISAETVKRSSKVLVAKRSLQLDVSFSECPSLARLAHVPLGEVPEGGRCTLILQLGGGARVFSRFRKAIAALVSATPP---------GGVATETSRVVIEKSRFQDFD---------------------TNAKTRPRTTACGLASSKS 166
            +  RLG+   +D+ GD+I IQVYP+ASPGKS GT     STGG GVFISI AETV  +SKVLV  RSLQ+DVS SECP+LARL   P  E      CT+I+QL GG+++F+RFR+AIAAL S  P          G  +T+ S  +     F+  D                     TN + RPR  ACGLASS S
Sbjct:  219 LRDRLGEAHHLDIGGDSISIQVYPKASPGKSSGT-----STGGGGVFISIPAETVAAASKVLVGARSLQVDVSLSECPALARLVRTPPEENAATANCTVIIQLEGGSQMFNRFRQAIAALKSKVPDVANEAKPSTGSKSTKGSLALEHAEVFKPSDEVEGAEGVEGNLGDDDEEESQTNHRKRPR-AACGLASSVS 408          
BLAST of mRNA_C-linearis_contig95.16991.1 vs. uniprot
Match: D7G7N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N8_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 4.460e-31
Identity = 141/429 (32.87%), Postives = 175/429 (40.79%), Query Frame = 0
Query:    1 MSQRLGDGKWVDVNGDNIGIQVYPRASPGKSRGTASPSSSTGGSGVFISISAETVKRSSKVLVAKRSLQLDVSFSECPSLARLAHVPLGEVPEGGRCTLILQLGGGARVFSRFRKAIAALVSATPP---------GGVATETSRVVIEKSRFQDFD---------------------TNAKTRPRTTACGLASSKS----IPPTSXXXXXXXXXXPLDHXXXXXXXXXXSARRVPSSAKKVTTDSDTDDLSPATAVKTGVRGGGASAQ-------ELP---AGSFRRIAQGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWEDSWMAPQRCLDLAPVPVAGEKXXXXXXXXXXXXXXXXXXXXRKARPSREKNDHVHRRAAKGRDAGGTAKQGLDLDKKTEWDPSGSD 385
            +  RLG+   +D+ GD+I IQVYP+ASPGK+ GT     STGG GVFISI AETV  +SKVLV  RSLQ+DVS SECP+LARL   P  E      CT+I+QL GG+++FSRFR+AIAAL S  P          G  +T+ S  +     F+  D                     TN + RPR   CGLA S S    I P                           A+R   +     TDS     + A  V T         +       E+P   AGSFRRIAQG+                                                   DSWMAP+R LDLAP     ++                    R    SR ++     RAAKG D G + + G      TEWD S  D
Sbjct:  199 LRDRLGEAHHLDIGGDSISIQVYPKASPGKTSGT-----STGGGGVFISIPAETVAAASKVLVGARSLQVDVSLSECPALARLVRTPPEENAATANCTIIIQLEGGSQMFSRFRQAIAALKSKVPDVAKEAKPSRGSKSTKGSSALEHAEVFKPSDELEGAEGVEEDLDDDDEEGTQTNHRKRPR-AVCGLAGSVSNRSRITPRKDGRRDSDRGGEDQTASREKASSGRKAKRAHRAPLNTPTDSPVSAPAAAARVNTSTASSAEKKRITDHAKGEVPTPAAGSFRRIAQGAAVTAHDSSLQARESSEGSSRSFSDDADATAARDDDGG--------------DSWMAPRRHLDLAPASATAKRKDKQA---------------RTKTGSRNRDGSGKVRAAKG-DGGSSLRGG-----STEWDISEDD 586          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAM6_9PHAE1.360e-3246.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7N8_ECTSI4.460e-3132.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 730..750
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 105..338
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 105..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:373696..382518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16991.1mRNA_C-linearis_contig95.16991.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig95 373696..386868 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig95.16991.1 ID=prot_C-linearis_contig95.16991.1|Name=mRNA_C-linearis_contig95.16991.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=889bp
MSQRLGDGKWVDVNGDNIGIQVYPRASPGKSRGTASPSSSTGGSGVFISI
SAETVKRSSKVLVAKRSLQLDVSFSECPSLARLAHVPLGEVPEGGRCTLI
LQLGGGARVFSRFRKAIAALVSATPPGGVATETSRVVIEKSRFQDFDTNA
KTRPRTTACGLASSKSIPPTSSRKAAAALVTPLDHSAAAAEAPRRSARRV
PSSAKKVTTDSDTDDLSPATAVKTGVRGGGASAQELPAGSFRRIAQGSGG
GTTHRSAEGSSGGGKASGKAARRRRPAHDSEEKKKEEEGDEGEEEEEWED
SWMAPQRCLDLAPVPVAGEKKKQQQKQQKQHQQQQQQQPPRKARPSREKN
DHVHRRAAKGRDAGGTAKQGLDLDKKTEWDPSGSDDDDDDDDNKVGQNAR
GPQQVTTPKNNKTKSNKQATALTRGRAEGPRTSPQQDRPLAGDEDSRPDE
EGAANRTEKGTRHQPRLSRCREDEDVAATVTAEPQTYRERVLSVDAGTPA
PPRADKKRGAAVAASNYVAEGAAESTKRAGEDKDVPDISGISDSSLGDLG
SIDEGDGGGGVDSPAAVTGSSSFRRGRGGSERERGTRSPPPPPSRQRQRQ
RQWQRHRQQQQQQQQQQRGADDDAGEGRGRDGRKRDGRGDDSGDDSGGVD
EFGEKDSGPGEEHGEMEMGLEHGEDVEEDGDDEDDGEDNIEWEEGEDEDQ
DQGGGADQDEEEDDEDHTLVKVTRMFQQVIADAQEKHRQLKKRKVDMALD
DARGLSLGYIDHVSQQVTEHWKSLVDDLAERGRKAEEGVAAAKEAVAALT
AEQEAQWQAARDRVQKHESALKRFEALLGASGGASNSTSELEREWQAGGA
AIQRKLQNHREVVVSRFSAWLAISSKKAKRSPGGGGAGR
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