prot_C-linearis_contig9.16650.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16650.1
Unique Nameprot_C-linearis_contig9.16650.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length95
Homology
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 9.390e-31
Identity = 68/108 (62.96%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 MVDRLADDLLEGKGFGAVAKSLAKAYQEG--TSVRS-VGL----VGQH------ADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEY 95
            +VDRLADDLLEG GF A +KSLA  Y       +RS V L    V +H       D G++PKFSSIGDPSG++SSPPSAHYLGDIW+  FYETPVVQ  GCSWTREEY
Sbjct:  143 VVDRLADDLLEGTGFAAASKSLANTYHARYFNQLRSYVSLANRCVSRHKGMWPNVDLGMIPKFSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEY 250          
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.890e-20
Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0
Query:    1 MVDRLADDLLEGKGFGAVAKSLAKAY----------------QEGTSVRSVGLVGQHADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVV 83
            ++DRLADDLLEGKGF A +KSL  AY                +  + ++ +GL+G  AD G +PKF  + D  G+NS  PSAHYLGDIW+ WF E PV 
Sbjct:  169 LIDRLADDLLEGKGFAATSKSLQNAYTATYFKLYRSYVSLANRRVSQLKGLGLLGPDADVGKIPKFEEMADALGFNSRHPSAHYLGDIWHKWFDEMPVT 267          
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: A0A6H5K4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D4_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 9.170e-16
Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0
Query:   18 VAKSLAKAYQEG--TSVRSV------------GLVGQHADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQ 84
            V+KSLA+AY     + +RS             GL GQ ++P  VPKF+  GDPSGYNSS PSAH+L DIWN WFYETPVVQ
Sbjct:  296 VSKSLAQAYNSRYFSQMRSYVSLAKKGISKYRGLYGQQSNPD-VPKFAGTGDPSGYNSSSPSAHHLADIWNKWFYETPVVQ 375          
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: A0A6H5KE68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE68_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.100e-14
Identity = 43/106 (40.57%), Postives = 53/106 (50.00%), Query Frame = 0
Query:    1 MVDRLADDLLEGKGFGAVAKSLAKA-----------YQEGTSVRSVGLVGQHADPGVVPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEY 95
            +VDRLADDL+ GKGF A AK + +A           Y      R    V       V  KF S  D   Y  + PS HYL D+W T+F E PV++  G  WTRE+Y
Sbjct:   76 LVDRLADDLVHGKGFSAAAKYIRQAHTTKFMAFQLKYVSLADARRSSRVSLFGAAPVPVKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVKGVKWTREDY 181          
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: D7FVB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 8.650e-14
Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = 0
Query:    1 MVDRLADDLLEGKGFGAVAKSLAKAYQEGTSV------------RSVGLVGQHADPGVVP-KFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEY 95
            MVDRLADDL+ GKGF A AK++ +A+     V            R+   + + A+    P +F S  D + Y  + PS HYL D+W  +F + PV++  G SWT EEY
Sbjct:    1 MVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVNSRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEVDGVSWTLEEY 108          
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: A0A6H5JPP4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP4_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 2.780e-12
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0
Query:    1 MVDRLADDLLEGKGFGAVAKSLAKAYQEGTSV------------RSVGLVGQHADPGVVP-KFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEY 95
            MVDRLADDL+ GKGF A AK++ +A+     V            R+   + + A+   +P +F S  D + Y  + PS HYL D+W  +F + PV++     WT EEY
Sbjct:  208 MVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVSTRRTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEMDSVDWTLEEY 315          
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: A0A6H5JZ22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ22_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.250e-10
Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 0
Query:    1 MVDRLADDLLEGKGFGAVAKSLAKAYQEGTSV------------RSVGLVGQHADPGVVP-KFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEY 95
            MVDRLADDL+ GKGF A AK++ +A+     V            R+   + + A+    P +F S  D + Y+ + PS HYL D+   +F + PV++     WT EEY
Sbjct:    1 MVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTEYSGAVPSEHYLRDVRRLYFSKPPVLEVESVDWTLEEY 108          
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: A0A6H5KTU1_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU1_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.200e-10
Identity = 39/108 (36.11%), Postives = 57/108 (52.78%), Query Frame = 0
Query:    1 MVDRLADDLLEGKGFGAVAKSLAKAYQEGTSV------------RSVGLVGQHADPGVVP-KFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEY 95
            MVDRLADDL+ GKGF A AK++ +A+     V            R+   + + A+   +P +F S  D + Y  + PS HYL D+   +F + PV++     WT EEY
Sbjct:   68 MVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVSTRRTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVRRLYFSKLPVLEVDSVDWTLEEY 175          
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: A0A6H5L7G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G9_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.050e-9
Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 0
Query:    1 MVDRLADDLLEGKGFGAVAKSLAKAYQEGTSV------------RSVGLVGQHADPGVVP-KFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEY 95
            MVDRLADDL+ GKGF A AK++ +A+     V            R+   + + A+    P +F S  D + Y  + PS HYL D+   +F + PV++     WT EEY
Sbjct:  208 MVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEY 315          
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 2.940e-9
Identity = 38/100 (38.00%), Postives = 51/100 (51.00%), Query Frame = 0
Query:    1 MVDRLADDLLEGKGFGAVAKSLAKAYQEGTSV----------RSVGLVGQH----ADPGV--VPKFSSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQ 84
            +V RLADDLL GKGF A +K   +AY     +          R    +G H    A+ G   +P F   GD  G+N + PS  YL  +W+ WFYET V++
Sbjct:  330 VVARLADDLLNGKGFSATSKFKREAYMNSYMMQYHSYVSLVNRCQRSIGGHFRAAAEEGTPDIPIFGGFGDREGFNGAWPSDQYLRAVWHKWFYETVVIE 429          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FIV2_ECTSI9.390e-3162.963'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KSM2_9PHAE3.890e-2047.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4D4_9PHAE9.170e-1655.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE68_9PHAE2.100e-1440.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FVB4_ECTSI8.650e-1438.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPP4_9PHAE2.780e-1237.04Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ22_9PHAE1.250e-1036.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTU1_9PHAE3.200e-1036.113'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5L7G9_9PHAE1.050e-936.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4M0_9PHAE2.940e-938.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2360518..2361020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16650.1mRNA_C-linearis_contig9.16650.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 2360518..2361196 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16650.1 ID=prot_C-linearis_contig9.16650.1|Name=mRNA_C-linearis_contig9.16650.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=95bp
MVDRLADDLLEGKGFGAVAKSLAKAYQEGTSVRSVGLVGQHADPGVVPKF
SSIGDPSGYNSSPPSAHYLGDIWNTWFYETPVVQDGGCSWTREEY
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