prot_C-linearis_contig88.16331.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig88.16331.1
Unique Nameprot_C-linearis_contig88.16331.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length233
Homology
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: D7FM74_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM74_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 2.150e-139
Identity = 185/230 (80.43%), Postives = 205/230 (89.13%), Query Frame = 0
Query:    3 AQQLAVERSVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEAGAKFHRECPEMTEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIKEGEWLPPATEES 232
            A QL+V+RSVRV  HT GMEWAPSPSPSVWRKRVALEGPQE+GRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAP S+DGCVLWVKLRQHGGPSR+H+R+DT SM W+DT+ PGV+AK LYS  P HVESMRIEKW+AGAK  REC +MTEFLVLEGEA   DASETF +RSWLR+PAG  +SMTS  GC+VF+KEGEWLPP++  +
Sbjct:    2 ASQLSVDRSVRVSVHTSGMEWAPSPSPSVWRKRVALEGPQESGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPCSRDGCVLWVKLRQHGGPSRKHTRLDTNSMQWEDTDIPGVKAKELYSH-PDHVESMRIEKWDAGAKVERECQKMTEFLVLEGEAEAHDASETFTKRSWLRLPAGATLSMTSAAGCQVFVKEGEWLPPSSSNT 230          
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: A0A1Y5TZ85_9PROT (ChrR Cupin-like domain protein n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5TZ85_9PROT)

HSP 1 Score: 224 bits (570), Expect = 1.810e-70
Identity = 115/228 (50.44%), Postives = 150/228 (65.79%), Query Frame = 0
Query:    3 AQQLAVERSVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEAGAKFHRECPEM-TEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIKEGEWLPPAT 229
            + +L  +   RV   T  M W  SPSPSVWRKR+ L GP EAGRVT++VRY+  S+F  H HPDGEEILVLEG++ D +GD+PAG+Y+LNPEGFRHAP S DGC+L+VKLRQ GGP R H  +DT ++ WQ    PG   K LY+  P  +E MR+ + + GA+  R   +   E LVLEG   D+D   T+ + SWLR P G   S+ S  G  +++K+G  LPPA+
Sbjct:    2 SHELNADFHARVAMDTAAMAWQASPSPSVWRKRLDLSGPAEAGRVTALVRYEPGSRFPAHEHPDGEEILVLEGTFSDEHGDYPAGSYLLNPEGFRHAPFSVDGCLLFVKLRQFGGPGRAHHAIDTAALDWQPGNMPGRSVKPLYA-APDGIEQMRLVRLDPGAQVPRHVHDRGEEVLVLEGAIADEDG--TYGKGSWLRFPDGSAHSVRSEHGAVIYVKQGH-LPPAS 225          
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: A0A7Y2ICR3_9GAMM (Anti-sigma factor n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y2ICR3_9GAMM)

HSP 1 Score: 215 bits (547), Expect = 6.920e-67
Identity = 110/216 (50.93%), Postives = 143/216 (66.20%), Query Frame = 0
Query:   11 SVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEA----GAKFHRECPEMTEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIKEG 222
            +VR    T+ MEW  SPS +VWRKRV L G  E+G+VTS+VRY   S F  H HP+GEEILVLEG + D +GD PAGTY+LNPEGFRHAP S+ GC+L+VKLRQ  GP REH  +DT+   WQ T+  GV  K+LY R   + ++ R+E+WEA    G   H +     EF VL+GE  DD+    +   +WLR+PAGG  S  +  GC+++IK+G
Sbjct:   13 TVRAFMDTQAMEWTASPSGTVWRKRVHLVGAPESGQVTSIVRYQPESSFPAHDHPEGEEILVLEGVFSDEHGDWPAGTYLLNPEGFRHAPFSQQGCLLFVKLRQFPGPDREHHVIDTRDREWQPTQRKGVWQKSLY-RQAGYSDTTRLERWEAESTAGTISHEQG---AEFFVLDGEFEDDEG--VYPAGTWLRIPAGGMHSPGTSRGCQLYIKQG 222          
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: A0A7C2JUM9_9GAMM (Anti-sigma factor n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C2JUM9_9GAMM)

HSP 1 Score: 209 bits (532), Expect = 1.290e-64
Identity = 106/211 (50.24%), Postives = 139/211 (65.88%), Query Frame = 0
Query:   13 RVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEAGAKFHR-ECPEMTEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIKEG 222
            RV   T  M W PSPS +V+RKRV L GP E+G+VTSVVRY   + F+ H HPDGEEILVLEG + D +GD PAGTY+LNPEGFRH+P S+DGCVL+VKLRQ  G +REH  + T ++ W+     GV  + LY++     ++MR+E+W   A+    E P   E  VLEG  RD+D    F + +WLR+P G   S ++  GC ++IKEG
Sbjct:   17 RVAVDTAAMAWTPSPSRTVFRKRVHLVGPPESGQVTSVVRYGPGATFHTHAHPDGEEILVLEGVFSDEHGDWPAGTYLLNPEGFRHSPFSRDGCVLFVKLRQFPGRTREHVALRTDTLEWRPAARAGVAVRPLYAQAG-FADTMRLERWPPEARLRPIEYPSGAELFVLEGSFRDEDGE--FARGAWLRLPPGAAHSPSTAEGCVLYIKEG 224          
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: A0A2N5Y5A5_9GAMM (Anti-sigma factor n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y5A5_9GAMM)

HSP 1 Score: 206 bits (523), Expect = 2.790e-63
Identity = 104/213 (48.83%), Postives = 140/213 (65.73%), Query Frame = 0
Query:   11 SVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEAGAKFHR-ECPEMTEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIKEG 222
            S RVV  T+ M+W PSP+  V RKR+ L G  E+G+VTS+VRY+  + F  H HP GEEILVLEG + D +GD PAG+Y+LNPEGF+HAP S++GC+L+VKLRQ+ G  REH  +DT +  WQ +       K LY++ P + + MR+E W+  A   +   P+  E LVL+G   DD+ S  +    WLR+PAGG I  TS   CE++IKEG
Sbjct:   13 SRRVVVDTQSMDWTPSPAGQVLRKRLHLVGQAESGQVTSLVRYEPGASFPAHDHPQGEEILVLEGVFSDEHGDWPAGSYLLNPEGFKHAPFSREGCLLFVKLRQYPGADREHVAIDTTARPWQPSVRKNTSWKKLYAQEP-YTDFMRLESWDTPAAIGQINFPQGAEILVLKGSFADDEGS--YRTHCWLRIPAGGAIHPTSNEYCELYIKEG 222          
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: A0A536YCZ3_9PROT (Anti-sigma factor n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YCZ3_9PROT)

HSP 1 Score: 204 bits (519), Expect = 1.490e-62
Identity = 110/211 (52.13%), Postives = 133/211 (63.03%), Query Frame = 0
Query:   11 SVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEAGAKFHRECPEM-TEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIK 220
            SVR VA T  MEWAPSPS SVWRKRV L GP E+G+VTSVVRY   S+F  H HP GEEILVLEG + D +GD PAGT++LNPEGFRHAP S+ GCVL+VKLRQ  G  R H  +DT  + W+ +  P V  K LY +     + MR+E+WE  A       E   E  VL GE  D+  +  +    WLR+PAG +    S  GC V+IK
Sbjct:   10 SVRAVADTTRMEWAPSPSRSVWRKRVHLVGPPESGQVTSVVRYGPRSRFPAHDHPQGEEILVLEGVFSDEHGDWPAGTFLLNPEGFRHAPFSEPGCVLFVKLRQFPGRERSHIVIDTHKLAWEPSSLPAVAYKALYQQTG-FSDVMRLERWEPQADLGVVSYEQGAELFVLGGEFVDEAGA--YSAGCWLRLPAGSEHHPRSAGGCTVYIK 217          
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: UPI000688EB27 (cupin domain-containing protein n=1 Tax=Marinobacterium jannaschii TaxID=64970 RepID=UPI000688EB27)

HSP 1 Score: 203 bits (516), Expect = 3.510e-62
Identity = 105/216 (48.61%), Postives = 133/216 (61.57%), Query Frame = 0
Query:   11 SVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEAGAKFHR-ECPEMTEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIKEGEWL 225
            S RV      M+W PSPS +VWRKR  L G  E+G+VTS+VRYD  ++F  H HP GEEILVLEG + D  GD PAG+Y+LNPEGF HAP S +GC+L VKLRQ  G  R H  +DT  + WQ +E  GV  K LY+    + E MR+E W   +     E PE  EF V+ GE  D+     +   SWLR+PAG + +  S +GCE++IK G  L
Sbjct:    9 SKRVQLDASSMDWQPSPSGTVWRKRFHLVGEGESGQVTSLVRYDPGARFPSHPHPGGEEILVLEGIFSDQQGDWPAGSYLLNPEGFEHAPGSAEGCLLLVKLRQFAGQERRHLALDTAELAWQPSEIKGVLVKQLYADND-YPEQMRLEHWAPDSHCGELEYPEGAEFFVISGEFEDEQGR--YPAGSWLRLPAGSRHNPRSALGCELYIKTGHLL 221          
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: A0A534ASB5_9GAMM (Anti-sigma factor n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534ASB5_9GAMM)

HSP 1 Score: 201 bits (512), Expect = 1.070e-61
Identity = 105/216 (48.61%), Postives = 144/216 (66.67%), Query Frame = 0
Query:   11 SVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEAGAK-FHRECPEMTEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIKEGEWL 225
            S RVV  T+ + W PSPS +VWRKR+ L GP EAG+VTS+VRY  +S+F  H HPDGEEILVLEG + D +GD PAGTY+LNPEGFRHAP S+ GC L+VKLRQ  G  R H  +DT+++ WQ  E  G   K LY++V  + +SMR+E+W +G++    +  +  E  VL G   D+  S  ++  +WLR+P   +    +  GCE++IKEG ++
Sbjct:   10 SARVVVDTKTLPWTPSPSGTVWRKRLHLVGPPEAGQVTSLVRYQPHSEFPLHDHPDGEEILVLEGVFSDEHGDWPAGTYLLNPEGFRHAPYSRGGCHLFVKLRQFPGKDRRHVVIDTQNLSWQTRE--GRAIKLLYAQVG-YADSMRLERWPSGSRPGELKYSQGAELWVLGGAFEDERGS--YDAHTWLRLPPQARHCPRTSGGCELYIKEGGFV 220          
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: A0A523JHQ7_9DELT (Anti-sigma factor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523JHQ7_9DELT)

HSP 1 Score: 201 bits (512), Expect = 1.250e-61
Identity = 108/213 (50.70%), Postives = 135/213 (63.38%), Query Frame = 0
Query:   11 SVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEAGAKFHRECPEM-TEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIKEG 222
            S  VV HT  MEW PSPS SV RKRV L G  EAG+VTSVVRY  NS F  H HP+GEEILVL+G + D +GD PAG+Y+LNPEGFRHAP SK GC+++VKLRQ+GG  R H  + T  + W+     G+  K LYS      + MR+E+W  GA       E   E LVL G   D+  S  +++ SWLR+PAG   +  S  GCE+++K G
Sbjct:   12 SQSVVMHTSSMEWLPSPSGSVLRKRVHLVGGAEAGQVTSVVRYLENSSFAAHDHPEGEEILVLDGVFSDEHGDWPAGSYLLNPEGFRHAPFSKPGCLIFVKLRQYGGRGRRHVALCTHELPWKSGPHAGIELKLLYSEAG-FPDEMRLERWAPGATPGTVSYEGGAEILVLRGRLEDEQGS--YDKLSWLRLPAGATHTPVSPNGCELYLKTG 221          
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Match: A0A523JY10_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523JY10_9GAMM)

HSP 1 Score: 201 bits (511), Expect = 1.460e-61
Identity = 106/219 (48.40%), Postives = 131/219 (59.82%), Query Frame = 0
Query:    5 QLAVERSVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSVVRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAPSSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVPRHVESMRIEKWEAGAKF-HRECPEMTEFLVLEGEARDDDASETFEQRSWLRVPAGGKISMTSVVGCEVFIKEG 222
            +L  + S  VV  T  MEW  SP   VWRKR+ L G  E+GRVTS+VRYDA S+F  H HP+GEEILVLEG   D +G +PAGTY+LNPEGFRHAP S  GCVL+VKLRQ+ G  R H  VD+ S  WQ +E PG     LY     H ESMR+ +   G +    + P   E  V+ G   D     T+EQ +WLR P G +    S  GC +++K G
Sbjct:    3 ELNADFSRPVVVRTAAMEWRSSPGAGVWRKRLELRGAAESGRVTSIVRYDAGSRFPPHEHPEGEEILVLEGILADEHGSYPAGTYLLNPEGFRHAPRSDQGCVLFVKLRQYPGSDRSHCEVDSNSATWQQSEPPGREVLPLYDE-HGHRESMRLVRLAPGTRVPEHDHPGGEEIYVMAGSLADGQG--TYEQGTWLRFPDGSRHQPFSDEGCTLYVKTG 218          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM74_ECTSI2.150e-13980.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y5TZ85_9PROT1.810e-7050.44ChrR Cupin-like domain protein n=1 Tax=Oceanibacte... [more]
A0A7Y2ICR3_9GAMM6.920e-6750.93Anti-sigma factor n=1 Tax=Woeseiaceae bacterium Ta... [more]
A0A7C2JUM9_9GAMM1.290e-6450.24Anti-sigma factor n=1 Tax=Gammaproteobacteria bact... [more]
A0A2N5Y5A5_9GAMM2.790e-6348.83Anti-sigma factor n=1 Tax=Kineobactrum sediminis T... [more]
A0A536YCZ3_9PROT1.490e-6252.13Anti-sigma factor n=3 Tax=Betaproteobacteria bacte... [more]
UPI000688EB273.510e-6248.61cupin domain-containing protein n=1 Tax=Marinobact... [more]
A0A534ASB5_9GAMM1.070e-6148.61Anti-sigma factor n=2 Tax=Gammaproteobacteria bact... [more]
A0A523JHQ7_9DELT1.250e-6150.70Anti-sigma factor n=1 Tax=Deltaproteobacteria bact... [more]
A0A523JY10_9GAMM1.460e-6148.40Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 3..226
e-value: 3.2E-63
score: 214.9
IPR025979ChrR-like cupin domainPFAMPF12973Cupin_7coord: 22..112
e-value: 2.1E-31
score: 107.7
coord: 132..220
e-value: 1.0E-9
score: 38.1
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 11..115
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 123..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:104378..108237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16331.1mRNA_C-linearis_contig88.16331.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig88 103787..108341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig88.16331.1 ID=prot_C-linearis_contig88.16331.1|Name=mRNA_C-linearis_contig88.16331.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=233bp
MDAQQLAVERSVRVVAHTRGMEWAPSPSPSVWRKRVALEGPQEAGRVTSV
VRYDANSQFNEHGHPDGEEILVLEGSWQDANGDHPAGTYMLNPEGFRHAP
SSKDGCVLWVKLRQHGGPSREHSRVDTKSMVWQDTETPGVRAKTLYSRVP
RHVESMRIEKWEAGAKFHRECPEMTEFLVLEGEARDDDASETFEQRSWLR
VPAGGKISMTSVVGCEVFIKEGEWLPPATEES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR025979ChrR-like_cupin_dom
IPR011051RmlC_Cupin_sf