mRNA_C-linearis_contig8.15645.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15645.1
Unique NamemRNA_C-linearis_contig8.15645.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: D8LI88_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI88_ECTSI)

HSP 1 Score: 493 bits (1269), Expect = 1.670e-171
Identity = 264/374 (70.59%), Postives = 292/374 (78.07%), Query Frame = 3
Query:   90 MISHLVKGCLCLRLLPSAXXXXXXXXXXXXXXXXXXXXXXXRPVAFGWTGGEGSRSATTRTQAVAAHQ---------QNHDLRELKDVPASTLATIEAVASDVDGTLTTPDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAPTNAEDGSAIVMEQLLRSKRAGLGEE 1184
            MIS +VKG +CLRLLPS+                       RP +FGWT                             N + R+L D PAS LAT+EAVASDVDGTLTTP+VTVT RTK+AIKAV++S L FFPATGKTRTGMYKILGED++AHLK K+TPGVF QGLVVYSG+GDEVL+E+LLDVEIVSQVASFCEE GVSLIAYSGD+IVCS KDAETDKIALY EPMP AVGPL +AMAAGLRVHKLILMD+KEAIDRVRP +ERLIG+RATFTQALPDMLEVLP GASKG GV++LL HLGIDP RLMALGDAENDVEMLRLAGVG+CVGNASP A+AAARF+APTNA DGSA+ MEQLLRSK    GEE
Sbjct:    1 MISQVVKGFVCLRLLPSSGAVSSTAVRGVQRGTYYHHRLHHRPASFGWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNREPRQLADAPASLLATVEAVASDVDGTLTTPEVTVTPRTKDAIKAVLNSELAFFPATGKTRTGMYKILGEDIAAHLKTKDTPGVFIQGLVVYSGAGDEVLYERLLDVEIVSQVASFCEERGVSLIAYSGDEIVCSVKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMDSKEAIDRVRPDIERLIGDRATFTQALPDMLEVLPAGASKGHGVDVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAMEQLLRSKEPPAGEE 374          
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: A0A6H5KW38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW38_9PHAE)

HSP 1 Score: 397 bits (1021), Expect = 1.170e-135
Identity = 201/241 (83.40%), Postives = 219/241 (90.87%), Query Frame = 3
Query:  462 PATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAPTNAEDGSAIVMEQLLRSKRAGLGEE 1184
            P   +TRTGMYKILGED++AHLKAK+TPGVF QGLVVYSG+GDEVL+E+LLD+EIVSQVASFCEE GVSLIAYSGD+IVCS KDAETDKIALY EPMP AVGPL +AMAAGLRVHKLILMD+KEAIDRVRP +ERLIG+RATFTQALPDMLEVLP GASKG GV +LL HLGIDP RLMALGDAENDVEMLRLAGVG+CVGNASP A+AAARF+APTNA DGSA+ MEQLLRSK    GEE
Sbjct:   16 PRARQTRTGMYKILGEDIAAHLKAKDTPGVFIQGLVVYSGAGDEVLYERLLDIEIVSQVASFCEERGVSLIAYSGDEIVCSEKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMDSKEAIDRVRPDIERLIGDRATFTQALPDMLEVLPAGASKGHGVNVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAMEQLLRSKEPPAGEE 256          
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: A0A836C834_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C834_9STRA)

HSP 1 Score: 287 bits (735), Expect = 4.050e-91
Identity = 160/309 (51.78%), Postives = 210/309 (67.96%), Query Frame = 3
Query:  246 GSRSATTRTQAVA---AHQQNHDLRELKDVPASTLATIEAVASDVDGTLTTPDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYS-GSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSA-KDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAPTNAEDGSAIVMEQLLR 1157
            G +++ TR QA A   A +    + EL     ++L  I+AVASD+DGT T PD+ V  R  +AI A +DSG+VFFPATGK+R GM   LG      LKA+  PGV+ QGLVVY  G   +V++E+LL  +I  +VA FC +  +SLIAYSGD IVC+  +D     IA Y+EP P AVG + EAMAAGL VHKLI+M   E + + RP + +L+G+RA+  QA+P MLEVLP GASKG GV  LLAH+G     LMA+GDAEND+EML++A V + +GNA P  K  ARFVAPTNA++G+A+ +E LL+
Sbjct:   30 GQKASGTRRQAAASSTAAELQKPVVELSQETLASLPEIKAVASDIDGTCTAPDLQVPQRVMDAIVATLDSGIVFFPATGKSRAGMMNTLGP-AGDILKARGAPGVYIQGLVVYGPGPDSKVIYERLLGADIGREVAQFCRDRNMSLIAYSGDRIVCTRLEDKYVTTIADYHEPFPEAVGEIDEAMAAGLPVHKLIIMAPAEEVVQQRPALAQLLGQRASLVQAMPHMLEVLPLGASKGIGVAKLLAHMGFKVENLMAMGDAENDIEMLKMAAVSVAMGNADPEVKKVARFVAPTNAQEGAAVALETLLQ 337          
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: A0A7S3XQN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQN8_HETAK)

HSP 1 Score: 241 bits (614), Expect = 3.610e-73
Identity = 134/250 (53.60%), Postives = 168/250 (67.20%), Query Frame = 3
Query:  348 IEAVASDVDGTLTTPDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVH-KLILMDTKE-AIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAA 1091
            I A+ASD+DGTL      V+ R  E I+     G++FFPATGK+R G+Y  LGE     LK +N PGVF QGL+VY  +G+ V+ E LL +E V +V  FC   G+SL+AY  D I+CS +DA TDK+  Y EP P A+GPL EAM A  +V+ KLI+M   E  I ++RP +E LIGE A  TQA+  MLE+LP G SKG GV  LL  LG+DP  L+ALGDAENDVEMLRLAG G+ +GNA P+  AA
Sbjct:   37 ITAIASDIDGTLLNSKQQVSQRNVETIQRARKKGILFFPATGKSRQGVYNALGE-FGQELKKENCPGVFLQGLIVYDQNGN-VIHEMLLPLEPVKKVVQFCTREGISLVAYHRDRILCSQRDANTDKLINYCEPTPEAIGPLDEAMVANGQVYNKLIIMGNDEDQITKIRPAMEALIGEDAEITQAIGYMLEILPKGGSKGDGVRRLLGALGVDPAGLLALGDAENDVEMLRLAGTGVAMGNARPALFAA 284          
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: A0A150GAB9_GONPE (Uncharacterized protein n=2 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GAB9_GONPE)

HSP 1 Score: 206 bits (523), Expect = 3.860e-60
Identity = 128/274 (46.72%), Postives = 165/274 (60.22%), Query Frame = 3
Query:  348 IEAVASDVDGTLTTPDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAP-TNAEDGSAIVMEQLLRSKR 1166
            I  +A+DVDGTL      +TS  + A+K     G+    ATGK R         DV   L   +TPGVF QGLVVY G G  VL EQ L  E+ +      +E  V+L+AY G+ I+C+A DA T++   Y EP P  VG L  A+   + VHK+I M  +  ID +RPGVE L+G RA+ T AL  MLEVLP GASKG G+  LL HLG+DP  +MALGD ENDVEML + G+G+ +GNA+P AKA+A  V   TN +DG A  +E+ +   R
Sbjct:    8 IRLIATDVDGTLLNHRQELTSGVEYAVKQAAALGVPLVFATGKARGPWI----HDVLPRLDL-DTPGVFLQGLVVYDGQG-AVLHEQRLPDEVATDCIRLAKELDVTLVAYCGERILCAATDAHTERFNFYREPPPEPVGDL-GAILGRVPVHKMIFMAEQARIDEIRPGVESLLGGRASLTTALSGMLEVLPLGASKGAGLRWLLDHLGVDPAHVMALGDGENDVEMLAMVGLGVAMGNAAPKAKASADVVLEETNDQDGVARAIEEYVVGPR 274          
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: A0A836C2C3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C2C3_9CHLO)

HSP 1 Score: 206 bits (523), Expect = 9.310e-60
Identity = 124/274 (45.26%), Postives = 165/274 (60.22%), Query Frame = 3
Query:  348 IEAVASDVDGTLTTPDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAP-TNAEDGSAIVMEQLLRSKR 1166
            I+ +A+DVDGTL      +T+  +EA+KA  + G+    ATGK R         DV   L   +TPGVF QGL+VY   G   L++Q L  ++        E  GV+L AY G+ I+C+A DA TD++  Y EP P AVG +   +     +HK+I M  +  ID +RP  E L+G RA+ T AL  MLEVLP GASKG+G+  LLAHLG++P  +MALGD ENDVEML+LAG+G+ +GNA P AKAAA  V   TN +DG A  +   +   R
Sbjct:   39 IKLIATDVDGTLLNHRQELTAGVEEAVKAARELGVPLVVATGKARGPWVA----DVLPRL-GLDTPGVFLQGLLVYDAEGRR-LYDQRLPDDVARDCIELAEREGVTLTAYCGERILCAATDAHTDRLNFYKEPPPEAVGDMRRQVGV-TEMHKMIFMADQSKIDALRPHAEALLGGRASLTTALTGMLEVLPLGASKGEGLRWLLAHLGVEPQHVMALGDGENDVEMLQLAGLGVAMGNAGPKAKAAADVVLDETNDQDGVAAAIRAYVLEPR 305          
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: A0A2W4QSP6_9CHLR (Sugar-phosphatase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4QSP6_9CHLR)

HSP 1 Score: 204 bits (520), Expect = 2.600e-59
Identity = 119/272 (43.75%), Postives = 167/272 (61.40%), Query Frame = 3
Query:  348 IEAVASDVDGTLTTPDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAPTNAEDGSAIVMEQLLRSK 1163
            IE +A D+DGTL      ++ RT  A++  M+ G+    ATGKTR    + +     A      TPGV+ QGL++Y+G G  V  +Q L+ E+  Q+  F     V+L AYSG DI    + A+TDK+A Y+EP+P+ +   P A    L ++K++L+D  E +  VR  +   +  RAT  QAL DMLE+LP GASKG G++ LL  LGI P R++A+GDAEND+EML+LAG+G+ VGNA P  KAAA FV  +N EDG A  +E+ +  K
Sbjct:   41 IELIAVDLDGTLLNSQHQLSERTVNALRKAMEHGVQVVLATGKTRRSAQEAIERLDLA------TPGVYLQGLILYNGDGS-VRAQQQLEPELARQLVEFAGREAVALAAYSGLDIYTPKRSAQTDKLARYHEPLPQEI---PAAELLALPINKILLIDEPERVSEVREQLAPQVEGRATLVQALDDMLEILPFGASKGAGLKRLLDDLGIAPERVLAIGDAENDIEMLQLAGIGVAVGNAMPQTKAAADFVVASNDEDGVAEAVERFVFGK 302          
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: A0A2P6TSJ6_CHLSO (Haloacid dehalogenase-like hydrolase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSJ6_CHLSO)

HSP 1 Score: 201 bits (510), Expect = 1.060e-57
Identity = 115/273 (42.12%), Postives = 169/273 (61.90%), Query Frame = 3
Query:  348 IEAVASDVDGTLTTPDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAPTNAEDGSAIVMEQLLRSKR 1166
            +E + SDVDGTL  P   +T+ T+ A++A   +G+    ATGK   G +     DV  HL   + P ++ QGL++ +   + VL++Q L+  I+ +  +F +E+GV+L AY GD IVC   D ++D++  Y EP P +VGPL E     L + KLI M++++ I  +RP +E+    RA+ T A+P MLEVLP GASKG GV  LL  LG+DP  +MALGD END EML L G+G+ +GNA+P+A + +  +   NAEDG A  +E+ +   R
Sbjct:   55 VELIVSDVDGTLLNPQQQLTAGTRAALQAAAAAGVPIVVATGKA-LGPWTA---DVLPHL-GSSLPQIYLQGLLI-NCHREGVLYQQQLEEHIILEAVAFADEHGVTLTAYCGDRIVCRETDEQSDRLLFYKEPPPESVGPL-ERQVGKLPISKLIFMNSEQRIAELRPAIEQTFAGRASLTTAIPGMLEVLPLGASKGVGVSWLLDRLGVDPAAVMALGDGENDKEMLELCGLGVAMGNAAPAALSVSDAITAKNAEDGVARAVERFVLGPR 320          
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: A0A8J4BBV4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BBV4_9CHLO)

HSP 1 Score: 200 bits (509), Expect = 2.080e-57
Identity = 123/269 (45.72%), Postives = 163/269 (60.59%), Query Frame = 3
Query:  330 ASTLATIEAVASDVDGTLTTPDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAP-TNAEDGSA 1133
            A+  A I+ +ASDVDGTL      +T   + A+K     G+    ATGK R G +     +V   L    TPGVF QGL+VY   G   L+EQ L  ++     S  +  G++L AY G+ I+C+A D+ TD++  Y EP P AVG L   +   +++ KLI M  +  ID +RP VE+L+  RA+ T AL  MLEVLP GASKG G+  LL HLG+DP  +MALGD ENDVEML++AG+G+ +GNA P AK+AA  V   TN EDG A
Sbjct:   55 ATPRAEIKLIASDVDGTLLNHQQQLTPAVEAAVKQASALGVPLVVATGKAR-GPW---AHEVLPRL-GLTTPGVFLQGLLVYDADGSR-LYEQQLPADVAQDCISLAKARGITLTAYCGERILCAATDSHTDRLNFYKEPPPEAVGDLARIVGE-IQIQKLIFMADQFVIDSLRPEVEQLLTGRASLTTALSGMLEVLPLGASKGAGLSWLLEHLGVDPAHVMALGDGENDVEMLQMAGLGVAMGNAGPKAKSAADVVLEETNDEDGVA 316          
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Match: A0A7S0RP72_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RP72_9CHLO)

HSP 1 Score: 197 bits (500), Expect = 2.560e-56
Identity = 115/272 (42.28%), Postives = 165/272 (60.66%), Query Frame = 3
Query:  351 EAVASDVDGTLTTPDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKNTPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGDDIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAIDRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPTRLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAPTNAEDGSAIVMEQLLRSKR 1166
            + + +DVDGTL      +T RT++A+KA  D+G+    ATGKTR    K    DV   L     PG+F QGL++Y  +G E+++   L   I  +   F +++GVSLIA+  D I+C ++D  TD+   + EP   A+GPL + +   + +HKLILM  +  ++R+RP  E L   RA  T A+P MLE+LP GASKG+ VE LL H+ IDP+ +MA GD ENDVEMLRL G  + V NA   A++A+  V  +N EDG A  +E+ + + R
Sbjct:   47 QLIVTDVDGTLLNSSQQLTLRTEQAVKAAQDAGVPTIVATGKTRGPWSK----DVLPRL-GPPMPGIFVQGLLIYDEAG-EIIYSNPLPDHIALEGIQFAKKHGVSLIAFCQDRILCESEDEHTDRTLDFGEPRAEAMGPLEDVLGE-VEMHKLILMGEESTLERIRPEAEALFEGRAALTVAVPGMLEILPKGASKGQAVEWLLNHMKIDPSNVMAFGDGENDVEMLRLVGASVSVENAGTHARSASITVTASNDEDGVAQAIEKFVLAPR 311          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI88_ECTSI1.670e-17170.59Haloacid dehalogenase-like hydrolase n=1 Tax=Ectoc... [more]
A0A6H5KW38_9PHAE1.170e-13583.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C834_9STRA4.050e-9151.78HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S3XQN8_HETAK3.610e-7353.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A150GAB9_GONPE3.860e-6046.72Uncharacterized protein n=2 Tax=Gonium pectorale T... [more]
A0A836C2C3_9CHLO9.310e-6045.26Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A2W4QSP6_9CHLR2.600e-5943.75Sugar-phosphatase n=1 Tax=Chloroflexi bacterium Ta... [more]
A0A2P6TSJ6_CHLSO1.060e-5742.12Haloacid dehalogenase-like hydrolase n=1 Tax=Chlor... [more]
A0A8J4BBV4_9CHLO2.080e-5745.72Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A7S0RP72_9CHLO2.560e-5642.28Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2196310..2199059 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score497.3
Seed ortholog evalue6.2e-138
Seed eggNOG ortholog2880.D8LI88
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009657,GO:0009658,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901259,GO:1901360
EggNOG free text desc.Sucrose-6F-phosphate phosphohydrolase
EggNOG OGs2S1YA@2759,COG0561@1
Ec32 ortholog descriptionHAD-like domain
Ec32 orthologEc-14_003610.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1232
Cds size1098
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930543.0920653-UTR-C-linearis_contig8:2196309..21963981622930543.0920653-UTR-C-linearis_contig8:2196309..2196398Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2196310..2196398 +
1690881123.6412811-UTR-C-linearis_contig8:2196309..21963981690881123.6412811-UTR-C-linearis_contig8:2196309..2196398Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2196310..2196398 +
1622930543.2361968-UTR-C-linearis_contig8:2199014..21990591622930543.2361968-UTR-C-linearis_contig8:2199014..2199059Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2199015..2199059 +
1690881123.722282-UTR-C-linearis_contig8:2199014..21990591690881123.722282-UTR-C-linearis_contig8:2199014..2199059Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2199015..2199059 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930543.1108646-CDS-C-linearis_contig8:2196398..21967841622930543.1108646-CDS-C-linearis_contig8:2196398..2196784Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2196399..2196784 +
1690881123.6539648-CDS-C-linearis_contig8:2196398..21967841690881123.6539648-CDS-C-linearis_contig8:2196398..2196784Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2196399..2196784 +
1622930543.1282995-CDS-C-linearis_contig8:2197171..21973911622930543.1282995-CDS-C-linearis_contig8:2197171..2197391Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2197172..2197391 +
1690881123.6650255-CDS-C-linearis_contig8:2197171..21973911690881123.6650255-CDS-C-linearis_contig8:2197171..2197391Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2197172..2197391 +
1622930543.1474118-CDS-C-linearis_contig8:2197809..21980101622930543.1474118-CDS-C-linearis_contig8:2197809..2198010Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2197810..2198010 +
1690881123.6841946-CDS-C-linearis_contig8:2197809..21980101690881123.6841946-CDS-C-linearis_contig8:2197809..2198010Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2197810..2198010 +
1622930543.1640735-CDS-C-linearis_contig8:2198342..21984511622930543.1640735-CDS-C-linearis_contig8:2198342..2198451Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2198343..2198451 +
1690881123.6998482-CDS-C-linearis_contig8:2198342..21984511690881123.6998482-CDS-C-linearis_contig8:2198342..2198451Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2198343..2198451 +
1622930543.2042325-CDS-C-linearis_contig8:2198832..21990141622930543.2042325-CDS-C-linearis_contig8:2198832..2199014Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2198833..2199014 +
1690881123.710826-CDS-C-linearis_contig8:2198832..21990141690881123.710826-CDS-C-linearis_contig8:2198832..2199014Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2198833..2199014 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15645.1prot_C-linearis_contig8.15645.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 2196399..2199014 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15645.1

>prot_C-linearis_contig8.15645.1 ID=prot_C-linearis_contig8.15645.1|Name=mRNA_C-linearis_contig8.15645.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=366bp
MISHLVKGCLCLRLLPSAAAAAVSTTARGAQRATYYHHHHRRPVAFGWTG
GEGSRSATTRTQAVAAHQQNHDLRELKDVPASTLATIEAVASDVDGTLTT
PDVTVTSRTKEAIKAVMDSGLVFFPATGKTRTGMYKILGEDVSAHLKAKN
TPGVFSQGLVVYSGSGDEVLFEQLLDVEIVSQVASFCEENGVSLIAYSGD
DIVCSAKDAETDKIALYYEPMPRAVGPLPEAMAAGLRVHKLILMDTKEAI
DRVRPGVERLIGERATFTQALPDMLEVLPPGASKGKGVEILLAHLGIDPT
RLMALGDAENDVEMLRLAGVGICVGNASPSAKAAARFVAPTNAEDGSAIV
MEQLLRSKRAGLGEE*
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mRNA from alignment at C-linearis_contig8:2196310..2199059+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15645.1 ID=mRNA_C-linearis_contig8.15645.1|Name=mRNA_C-linearis_contig8.15645.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2750bp|location=Sequence derived from alignment at C-linearis_contig8:2196310..2199059+ (Chordaria linearis ClinC8C monoicous)
TTTGCTCGTTGTTAGCTCGTTGAAAGCAAAAGCAACAGCTGCCCACGAAA CAGAGAGAGGCACATCATACTTGTCTAAGGAGAGTGGCGATGATAAGCCA TTTAGTCAAAGGATGTCTGTGTTTGCGTCTTCTGCCGAGCGCAGCCGCAG CAGCAGTCTCGACAACGGCCCGAGGTGCTCAACGCGCGACATACTACCAC CACCATCATCGTCGCCCGGTGGCGTTTGGGTGGACGGGAGGAGAGGGCTC TCGATCCGCGACTACCAGAACACAAGCTGTTGCAGCCCACCAGCAGAACC ATGATCTTCGAGAGCTCAAGGATGTCCCGGCCTCTACACTGGCGACAATC GAGGCCGTTGCGAGCGATGTGGACGGCACCCTCACCACGCCGGACGTGAC AGTAACGTCTAGGACGAAGGAGGCGATAAAGGCTGTGATGGACTCTGGCC TGGTGTTTTTTCCTGCCACGGGGAAGTGAGAAACCCCAAGCCCCTTGCAG GCGCGAACGGCGGGCCGAATTGGTGTGCATACACTACACATATTGTAGGG ATGCAAGTTAGGAGGCTACTGCTGTAGATTCCCTTCTGCTCATGTTCGCC GTAAGCGCGTGGGTCTTTGTACATACTCTGAAGGTTGAGGTTTAGGTTTC CAGTGTACAGCAGTACTGCATAAGATTCAGCTGAGGGGATTGGAAAGTAA AATCAGAAATCAAAGAGTTTTTGTTTCATCCTACAGCAGTTGTTACAAAA AGCCAACATGAAGTAAGCTACAGCAAGCAATAGAAACAAATCCGGGCAGT GAAGTATGTGCGCGTCAACCGCCTGAACGAACCCTCGCTGCCCATATTAA TATTTTGAGCAGAACCCGCACCGGGATGTACAAAATCTTGGGAGAAGACG TAAGCGCACACCTGAAGGCCAAGAACACACCAGGCGTCTTCAGCCAAGGT CTGGTGGTCTACTCCGGCTCCGGTGACGAGGTGCTGTTTGAGCAGCTGCT AGACGTGGAGATCGTGTCGCAGGTGGCGAGCTTCTGCGAGGAGAATGGGG TCTCGCTTATAGCCTACAGCGGTGACGACATCGTGAGTGCGCGACTGACT CTGCGTCTTCTTCCCCAGTGCCGAAAGGCCAGGAAACACGAAACGCCTAC GAAGTATAAATTGGATTGTTAATTTGTTGTTGAAGAACCACAGCTACCGA TGCAAGCTGGCGGTGATGCCTGCGCGCGCTTCATCGCCGCACCTTGGCTC CCTCGGCGACGTTACTTGATACCTCTCGTATGTATGTCTCGCTTGCGAAG GGACGACATCGTCCTTACATGTCCGGCGTACCACACGAAGAGAAGGAAGC ATCTTGAAAAGGGGGAAGCAAAAGTGAACTACCACTTACTACCGTATCAC AGCAGAAGCAAGCGAGGAAATTTATTCATCCAACGTCCGCGTGCTGACTG CACTGCACGAACACAACGCACGCGTGCGCCGCCGCCCCCCTCCGCGCCAG GTGTGCTCGGCGAAAGACGCGGAGACCGACAAGATAGCGCTCTACTACGA ACCCATGCCCCGTGCCGTTGGCCCTCTCCCGGAGGCCATGGCGGCCGGCC TTCGAGTTCACAAGCTCATCCTCATGGACACGAAAGAGGCGATCGATCGG GTCCGGCCGGGCGTTGAGCGGTTGATTGGTGAACGGGCAACATTTACGCA GGTGCGGCCGTATCGGAAATCGGGGTGGTCCATGAAAGATGTCTGCTTTG GGTTGAGAAGCTACACGACGAAAGGATAGGCGATGGTTGAGGTCGAGGCA AGGAATTGCGCTGGGTCGGTGTCGTGGAACAGGAGGTTGAGGTTCGTTTT GCGGGGTGGTTGCCCTTTGCAGCTTCATGGGGCGGGCGAGGTGCGACAAC TCAGCGTGACGCCAAAGTTATCTTACATAAAGAACGCCCACAGCCGTAAG CATGTCTGAAAGTAGCAATCGGCTCGCATCGCGGACCGAACGAACGCAAC TTCGTTGGTCGTGCTATCTCGGCTCATCATCAGGCCCTCCCGGACATGCT GGAGGTTTTGCCTCCCGGAGCAAGCAAAGGAAAAGGTGTCGAGATCCTCC TCGCCCACTTAGGGATAGACCCGACGCGTTTGATGGCTTTAGGTGAGCAA GTAAGCAAAAAGACTCCAGTCTGGCCTGAGCGAGACGCTTCCCGGGAGGG AATATCGCCGCTGATTTGCCCCTGAGAAAAATGAGTAAATGACAACCGCA GATCAGTGAGGAAGGGAGCTCACGCCCCATCCCGCGGCAAATCATCCTAT GACCAGCCCACCTTTATGCAACACAATTCGAACCCACCCATGGAGGCAAT CCAACTATTGGCCGGTTGCTCCTCCACGATGCATCAGCTTTACGTTGCAC CATTCACCAAGATACCTTTCGCGCTGTGTGTGTTTTCCAAGTGGCACATA AAAGCTGAGAAATCTTTCCATGGCGGCCCCAAGCTACCGTATTTTATCCC CCCCCTGCCCCCATCTGTCTCAGGCGATGCCGAGAACGACGTGGAGATGT TGCGCCTGGCCGGTGTAGGGATATGCGTCGGAAACGCTTCCCCCTCCGCG AAAGCGGCCGCGCGTTTCGTGGCGCCGACCAATGCCGAGGATGGATCAGC CATCGTCATGGAACAGTTGCTCCGAAGTAAACGGGCGGGATTGGGAGAGG AATGAGTTGTGAGGCCTGCGGGCTAGATTTCGGCCGTTTGTATGTGGGTG
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Coding sequence (CDS) from alignment at C-linearis_contig8:2196310..2199059+

>mRNA_C-linearis_contig8.15645.1 ID=mRNA_C-linearis_contig8.15645.1|Name=mRNA_C-linearis_contig8.15645.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2196bp|location=Sequence derived from alignment at C-linearis_contig8:2196310..2199059+ (Chordaria linearis ClinC8C monoicous)
ATGATAAGCCATTTAGTCAAAGGATGTCTGTGTTTGCGTCTTCTGCCGAG
CGCAGCCGCAGCAGCAGTCTCGACAACGGCCCGAGGTGCTCAACGCGCGA
CATACTACCACCACCATCATCGTCGCCCGGTGGCGTTTGGGTGGACGGGA
GGAGAGGGCTCTCGATCCGCGACTACCAGAACACAAGCTGTTGCAGCCCA
CCAGCAGAACCATGATCTTCGAGAGCTCAAGGATGTCCCGGCCTCTACAC
TGGCGACAATCGAGGCCGTTGCGAGCGATGTGGACGGCACCCTCACCACG
CCGGACGTGACAGTAACGTCTAGGACGAAGGAGGCGATAAAGGCTGTGAT
GGACTCTGGCCTGGTGTTTTTTCCTGCCACGGGGAAATGATAAGCCATTT
AGTCAAAGGATGTCTGTGTTTGCGTCTTCTGCCGAGCGCAGCCGCAGCAG
CAGTCTCGACAACGGCCCGAGGTGCTCAACGCGCGACATACTACCACCAC
CATCATCGTCGCCCGGTGGCGTTTGGGTGGACGGGAGGAGAGGGCTCTCG
ATCCGCGACTACCAGAACACAAGCTGTTGCAGCCCACCAGCAGAACCATG
ATCTTCGAGAGCTCAAGGATGTCCCGGCCTCTACACTGGCGACAATCGAG
GCCGTTGCGAGCGATGTGGACGGCACCCTCACCACGCCGGACGTGACAGT
AACGTCTAGGACGAAGGAGGCGATAAAGGCTGTGATGGACTCTGGCCTGG
TGTTTTTTCCTGCCACGGGGAAAACCCGCACCGGGATGTACAAAATCTTG
GGAGAAGACGTAAGCGCACACCTGAAGGCCAAGAACACACCAGGCGTCTT
CAGCCAAGGTCTGGTGGTCTACTCCGGCTCCGGTGACGAGGTGCTGTTTG
AGCAGCTGCTAGACGTGGAGATCGTGTCGCAGGTGGCGAGCTTCTGCGAG
GAGAATGGGGTCTCGCTTATAGCCTACAGCGGTGACGACATCAACCCGCA
CCGGGATGTACAAAATCTTGGGAGAAGACGTAAGCGCACACCTGAAGGCC
AAGAACACACCAGGCGTCTTCAGCCAAGGTCTGGTGGTCTACTCCGGCTC
CGGTGACGAGGTGCTGTTTGAGCAGCTGCTAGACGTGGAGATCGTGTCGC
AGGTGGCGAGCTTCTGCGAGGAGAATGGGGTCTCGCTTATAGCCTACAGC
GGTGACGACATCGTGTGCTCGGCGAAAGACGCGGAGACCGACAAGATAGC
GCTCTACTACGAACCCATGCCCCGTGCCGTTGGCCCTCTCCCGGAGGCCA
TGGCGGCCGGCCTTCGAGTTCACAAGCTCATCCTCATGGACACGAAAGAG
GCGATCGATCGGGTCCGGCCGGGCGTTGAGCGGTTGATTGGTGAACGGGC
AACATTTACGCAGGTGTGCTCGGCGAAAGACGCGGAGACCGACAAGATAG
CGCTCTACTACGAACCCATGCCCCGTGCCGTTGGCCCTCTCCCGGAGGCC
ATGGCGGCCGGCCTTCGAGTTCACAAGCTCATCCTCATGGACACGAAAGA
GGCGATCGATCGGGTCCGGCCGGGCGTTGAGCGGTTGATTGGTGAACGGG
CAACATTTACGCAGGCCCTCCCGGACATGCTGGAGGTTTTGCCTCCCGGA
GCAAGCAAAGGAAAAGGTGTCGAGATCCTCCTCGCCCACTTAGGGATAGA
CCCGACGCGTTTGATGGCTTTAGGCCCTCCCGGACATGCTGGAGGTTTTG
CCTCCCGGAGCAAGCAAAGGAAAAGGTGTCGAGATCCTCCTCGCCCACTT
AGGGATAGACCCGACGCGTTTGATGGCTTTAGGCGATGCCGAGAACGACG
TGGAGATGTTGCGCCTGGCCGGTGTAGGGATATGCGTCGGAAACGCTTCC
CCCTCCGCGAAAGCGGCCGCGCGTTTCGTGGCGCCGACCAATGCCGAGGA
TGGATCAGCCATCGTCATGGAACAGTTGCTCCGAAGTAAACGGGCGGGAT
TGGGAGAGGAATGAGCGATGCCGAGAACGACGTGGAGATGTTGCGCCTGG
CCGGTGTAGGGATATGCGTCGGAAACGCTTCCCCCTCCGCGAAAGCGGCC
GCGCGTTTCGTGGCGCCGACCAATGCCGAGGATGGATCAGCCATCGTCAT
GGAACAGTTGCTCCGAAGTAAACGGGCGGGATTGGGAGAGGAATGA
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