prot_C-linearis_contig8.15447.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15447.1
Unique Nameprot_C-linearis_contig8.15447.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length283
Homology
BLAST of mRNA_C-linearis_contig8.15447.1 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE)

HSP 1 Score: 411 bits (1057), Expect = 4.430e-143
Identity = 205/256 (80.08%), Postives = 225/256 (87.89%), Query Frame = 0
Query:    1 MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVDRFAVSAHEKKEVVSDVGVENPTPRVSGFDMIWAFPLPYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDKAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDKSMKSKHGIN 256
            MDMHQHLPYSMARLACSSF+EGKWAGSEKAFEHAVGQE+ARA LL LWP+LYE AEW GW+EEH +LEIL DDLSEA TT EKD+LTFGMFSKL+AS EFR EV+R+A+SA EKKE+V D   EN  PRVSGFDMIW+FPL YEWACHAI FAPIHQQLVES FST+DTCT+KHDSREID+VRLGQFRS  SRRVQRL A+NKEIR AGDKAIAVAR  K +A+HA+PNERQLRKR HDT QFLRD+S KSKHG N
Sbjct:    9 MDMHQHLPYSMARLACSSFFEGKWAGSEKAFEHAVGQEYARASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDDDAENQAPRVSGFDMIWSFPLLYEWACHAILFAPIHQQLVESDFSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKRTHDTKQFLRDQSEKSKHGSN 264          
BLAST of mRNA_C-linearis_contig8.15447.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 9.810e-133
Identity = 204/272 (75.00%), Postives = 234/272 (86.03%), Query Frame = 0
Query:    1 MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVDRFAVSAHEKKEVVSDVGVENPTPRVSGFDMIWAFPLPYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDKAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDKSMKSKHGINWIVKSVMEEDILSEES 272
            MDMHQHLPYSMARLACSSF+EGKWAGSEKA EHAVGQE+ARA LL LWP+L E AEW GW+EEH +LEIL DDLSEA TT EKD+LTFGMFSKL+AS EFR EV+R+++SA EKKE+V D   E+  PRVSGFDMIW+FPL YEWA HAI FAPIHQQLV+SV STYDTCT+KHDSREI +VRLGQFRS QSRRVQRL A+NKEIR+AGDK IAVAR  K +A+ A+PN+ QLRKR  DT QFLRD+S KSKHG NW+V+SV++E++ SEES
Sbjct:  505 MDMHQHLPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDDDAESQAPRVSGFDMIWSFPLLYEWARHAILFAPIHQQLVKSVCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVARELKKSAAQAIPNDWQLRKRVLDTKQFLRDQSEKSKHGSNWVVRSVLKEEMSSEES 776          
BLAST of mRNA_C-linearis_contig8.15447.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 2.190e-123
Identity = 193/274 (70.44%), Postives = 219/274 (79.93%), Query Frame = 0
Query:   10 SMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVDRFAVSAHEKKEVVSDVGVENPTPRVSGFDMIWAFPLPYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDKAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDKSMKSKHGINWIVKSVMEEDILSEESEAESNASDELS 283
            SM RLACSSFYEGKWAGSE+ FEHAVGQE ARALLL  WP+ YE+ EW+GWEE++TF E               +KLT GMFSKL AS EFR+E++R+A SAHEKK+VVSDV VEN TPRVSGFDMIW FP  YEWACHA+FFAPIHQQLVES  STYDT T+KHDSRE+D+VRLGQF SR SRRV+RLD+SN+EIRD GDKAIAVA   K +ASHAVPNERQLR  EHD  +FL+DKS KSKHG  W+VKSVMEE +LS   E+ES AS+ LS
Sbjct:  164 SMTRLACSSFYEGKWAGSEEGFEHAVGQEVARALLLAFWPNRYESTEWKGWEEQNTFRE---------------NKLTLGMFSKLAASAEFREELERYAASAHEKKKVVSDVDVENQTPRVSGFDMIWTFPQLYEWACHAVFFAPIHQQLVESSSSTYDTGTQKHDSRELDIVRLGQFSSRGSRRVERLDSSNQEIRDEGDKAIAVATVLKKSASHAVPNERQLRNGEHDWRKFLKDKSEKSKHGSKWVVKSVMEE-VLSSSEESESEASENLS 421          
BLAST of mRNA_C-linearis_contig8.15447.1 vs. uniprot
Match: D7FXZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 1.070e-113
Identity = 183/285 (64.21%), Postives = 220/285 (77.19%), Query Frame = 0
Query:    1 MDMHQHLP-YSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVDRFAVSAHEKKEVVSD-VGVENPTPRVSGFDMIWAFPLPYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDKAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDKSMKSKHGINWIVKSVMEEDILSEESEAESNASDELS 283
            MD H   P     +++    YEGKWAG++KA EHAVG+EFARALL+ LWP+  E+AEWR W+EEH  L IL  DLSEA T GEKDKLTFGM+++L+ S EFRKEV+ +A SAHEKKEVVSD + V+NP PRVS F MIW FPL YEWA HAIF A IH+QLV SVFS YDTCT++HDSREID+VRLGQFRS QSRR+++L ASN EIR+AG+KAIA ARA + AAS AVPNERQ RKR HD TQF+R  + K+K+G  W V+SV++      ESE+ES+ S ELS
Sbjct:    1 MDRHASAPPLQHGQVSLQLLYEGKWAGADKANEHAVGKEFARALLVALWPEKNESAEWREWQEEHDILGILEGDLSEATTPGEKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVIHEQLVGSVFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKRGHDVTQFVRTATNKAKYGPGWQVRSVLD----MSESESESDVSAELS 281          
BLAST of mRNA_C-linearis_contig8.15447.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 7.020e-41
Identity = 97/236 (41.10%), Postives = 131/236 (55.51%), Query Frame = 0
Query:    1 MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVDRFAVSAHEKKEVVSDVGVENPTPRVSGFDMIWAFPLPYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDKAIAVARAFKTAASHAVPNERQLRKR 236
            M+ HQ LP SMAR+ C SF+       E A E AVG EFARA L V W  LYE       E E  +   L  DL        KD+LTFG+FS++D+    R E++++A S    KEV  D G    T   S    ++ FPL Y+  CH  +F PIHQQL+E+ FS +D+C +K D  E+D+VR+G ++S +SR +   DA+ ++IR AG K +  AR  K  +    P E   RKR
Sbjct:  234 MERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEP--RTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEV--DQGAPKGT---SALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKR 462          
BLAST of mRNA_C-linearis_contig8.15447.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 8.560e-37
Identity = 90/229 (39.30%), Postives = 119/229 (51.97%), Query Frame = 0
Query:    1 MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPDLYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEFRKEVDRFAVSAHEKKEVVSDVGVENPTPRVSGFDMIWAFPLPYEWACHAIFFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDASNKEIRDAGDKAIAVARAFKTAASHAVPN 229
            M  HQ LP SMAR+ C SFY         A E AVG EFARA   V WP LYE       E E  +   L  DL        KD+LT G+FS +D     R E++++A S    KE+      E+     S    ++  PL Y   CH  +F PIHQQL+E+ FS YD+C KK D  E+D+VR+G ++S +SR +  +DA + +IR AG K +  A   K  +    PN
Sbjct:  235 MQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEP--RTERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEID-----ESAPKGTSALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATEAKAISHARKPN 456          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JSZ3_9PHAE4.430e-14380.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU73_9PHAE9.810e-13375.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN38_9PHAE2.190e-12370.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXZ1_ECTSI1.070e-11364.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FIQ1_ECTSI7.020e-4141.10Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JI13_9PHAE8.560e-3739.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:96144..96992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15447.1mRNA_C-linearis_contig8.15447.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 96140..96992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15447.1 ID=prot_C-linearis_contig8.15447.1|Name=mRNA_C-linearis_contig8.15447.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=283bp
MDMHQHLPYSMARLACSSFYEGKWAGSEKAFEHAVGQEFARALLLVLWPD
LYENAEWRGWEEEHTFLEILTDDLSEAATTGEKDKLTFGMFSKLDASDEF
RKEVDRFAVSAHEKKEVVSDVGVENPTPRVSGFDMIWAFPLPYEWACHAI
FFAPIHQQLVESVFSTYDTCTKKHDSREIDLVRLGQFRSRQSRRVQRLDA
SNKEIRDAGDKAIAVARAFKTAASHAVPNERQLRKREHDTTQFLRDKSMK
SKHGINWIVKSVMEEDILSEESEAESNASDELS
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