prot_C-linearis_contig79.15392.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig79.15392.1
Unique Nameprot_C-linearis_contig79.15392.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1922
Homology
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: D8LMH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH7_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 4.640e-106
Identity = 230/397 (57.93%), Postives = 260/397 (65.49%), Query Frame = 0
Query:    1 MPPKAKDKKGKQELLPTGVDYTRRPLPATEPCDARPTPRRELPVVSAHHSFEEWDEDSLAEMEWGTAGAETFFEDKDGRCFLPAKMAARVVRWVRPRDLIAQKKDLDGEEELQQ------GGKGATGGAEKGKASXXXXXXXXXPPKXXXKAPASEPSVLADAAADEEGNPLPRVVIPAPTEAVPGDIGDDRGNGKPDAADTPGQAPDK--VSHGTIPTRGFKTAWSTEQRQQIASLL--RSKGAQXXXXXXXXXXXXGSSSDVNETPVGGRETXXXXAVEGNGNLGDXXXXXXXEGGSGAAPDFLSDDDIAMLGAPSGDDIDPAMTAIFKVVGQLSPTLSRTGCPLLWEAIYPKTSDEVPCYNPCGLYAIKLFAAGRWRKVEVDDCIPLDATRSPV 387
            MPPKAKDKKGKQE+LP G+DYTRRPL + EPCDARP PRRELPVVSAHH+FEEWD+D+L EMEWG   AE F EDKDGR FLPA+++ARV RWVRP +L+  +   DG+EE QQ      GG G   G EKGKA       XXX   XXX  P+ EP VL D A D +GNPLPR+ +P     V  D   D G      A T  Q   +  V + T+P RGFKT WS  QR+ IASLL   ++   XXXXXXXXXXXX                XXXX     G  GD          S   P +L D+DIA LGAPSG DIDPAMTAIFK + QLS T+S TGCPLLWE IYPKT++EVPCYNPCG Y IKLFAAGRWR+VEVDD IPLDAT  PV
Sbjct:    1 MPPKAKDKKGKQEVLPVGIDYTRRPLASAEPCDARPPPRRELPVVSAHHAFEEWDDDALLEMEWGMVRAEPF-EDKDGRSFLPARISARVARWVRPTELLTNETGEDGKEEHQQHSSGAVGGNGTASGVEKGKAGGGADKGXXXXXXXXXXXPSVEPVVLEDVAVDLQGNPLPRIFVPR-AAIVANDSATDEG------AQTLSQVAKQSSVPNATLP-RGFKTGWSESQRRDIASLLCKYNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSGDW---------SKEPPAYLRDEDIATLGAPSGGDIDPAMTAIFKAIDQLSSTVSSTGCPLLWETIYPKTANEVPCYNPCGRYLIKLFAAGRWRRVEVDDSIPLDATGRPV 379          
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: D8LMH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH9_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 5.210e-53
Identity = 130/263 (49.43%), Postives = 146/263 (55.51%), Query Frame = 0
Query: 1660 EVGMAHDTTRVDRENAEVESWEIAEPGRAGRAALLWNQRQASKVARLGNGDTSVLPPSSPSAETNASAVXXXXXXXXXXXXGAEGYEDWIKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKPAVLIGQEELKQRAKEREALRQATAEFEKKWEEDRIKTVEAGKEHMAMQVKFIRGREEQIKEARLPFLHDRDAIVQDMIAKAEARKEALEEERAALEPTSKGAKGKQA-KGKPGKK 1921
            EV MAHD +RVD EN EVESWE A PGRA RAALLW QRQASKVA LGNGD S+   SSP     +S                                                                              P P+ LI  EE+K+RA ER ALRQ T EFEKKWE DR+  VEAG + MAMQ+++IRGREE IK+ARLPFL DR+ IVQD+IAK  ARKEA+EEERAALEPT+KG K KQA KGKPGKK
Sbjct:   44 EVEMAHDMSRVDSENKEVESWEAATPGRADRAALLWTQRQASKVASLGNGDRSLTSSSSPENVATSSPTTSSNVSVNPK------------------------------------------------------------------PVPSALISDEEMKKRADERVALRQTTMEFEKKWEADRVDMVEAGMQEMAMQLEYIRGREESIKQARLPFLRDRETIVQDLIAKMRARKEAVEEERAALEPTTKGGKTKQATKGKPGKK 240          
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: D8LMH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH8_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 6.720e-22
Identity = 94/287 (32.75%), Postives = 121/287 (42.16%), Query Frame = 0
Query:  908 VRARDPGSPPAIFLLVTPSPRLAREVSAK-NGFREFMSSNAPSDIPGEIPELDGALSEPPPTGIENTENXXXXXXXXXX------HNPPEVTVGGTGGNATLDDENPTGIEEGGDEQDNVSSGVPDAQEEXXXXX--------AEILMCLWVDKPGIGGGVGGTSSQPSSSRSNTHATVVLQEVLPGV-SGQYARGEFSKPVPGGRVVMCARYDPHRSGLPFTATSAKVRLTKGGAPRVFRVLLQPGVGCCVGFCCTHAIETGDAGQVWAEAGYNQVTETGKYEGAR 1178
            ++ARDPGSPP IFL++TPSPR A +++   +  R+    +AP        E   A    P  G   TEN                  PP          + + + +  G+ E   E  +   GV  +  E    X        AE+LM LW D+PG              +  N  A V LQEVLPGV  G +   E  KPVPGGR++M  ++D   +GLPFTA SAKV                                       W EAGYNQVTETGKY+GAR
Sbjct:    1 MQARDPGSPPPIFLVITPSPRSAPKITTTASSMRQSADRDAPDG------EKTIAQEREPEPGDSKTENEMDSHRRNEETGELLGEGPPXXXAAAGAVASAVSEMSRGGVVESPPEM-SAGCGVQRSSGERLEEXXXXXXXXXAEVLMNLWADQPGA-------DITTKKADWNASAMVALQEVLPGVPEGLHTSAESFKPVPGGRLIMRVKHDLEPNGLPFTAKSAKV---------------------------------------WEEAGYNQVTETGKYDGAR 234          
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: A0A2D4C107_PYTIN (Calpain catalytic domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C107_PYTIN)

HSP 1 Score: 107 bits (268), Expect = 1.470e-19
Identity = 48/109 (44.04%), Postives = 70/109 (64.22%), Query Frame = 0
Query:  307 PSGDDIDPAMTAIFKVVGQLSPTLSRTG-CPLLWEAIYPKTSDEVPCYNPCGLYAIKLFAAGRWRKVEVDDCIPLDATRSPVIAASEDPLELWPLLLSKALYKLYRLGG 414
            P G+ + P M + F+++ QL P   R G  P LWEAIYP+ +  VP Y+PCG Y++KLF  G+WR+V+VDDC P+D      + +S    ELWP +L+KA+ K++   G
Sbjct:  316 PHGEVVHPDMASYFRIIDQLYPHWGRAGETPYLWEAIYPQDTHGVPVYSPCGKYSVKLFVMGKWRRVDVDDCFPVDEEGEIQLVSSSMRAELWPSILAKAILKVFHWVG 424          
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: A0A482RSF0_9ARCH (Calpain catalytic domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSF0_9ARCH)

HSP 1 Score: 98.2 bits (243), Expect = 2.800e-17
Identity = 55/147 (37.41%), Postives = 78/147 (53.06%), Query Frame = 0
Query:  310 DDIDPAMTAIFKVVGQLSPTLSRTG-----------CPLLWEAIYPKT-SDEVPCYNPCGLYAIKLFAAGRWRKVEVDDCIPLDATRSPVIAASEDPLELWPLLLSKALYKLYRLGGYDLALAQEVSAITGDAAARDEGPAHASTPG 444
            D +DP +   F ++ +  P + +             C  LW A+YP+  +++ P YNP G YA+KLF AG+WRKV VDD +P+++     +A S D LELWP+LLSKA+Y +Y    Y            GD A  D  P   S+PG
Sbjct:  152 DFVDPLICETFNIIAEFMPKIIKNTAEKPANVQEMHCNYLWRAVYPQIKTNQKPVYNPAGKYAVKLFLAGKWRKVYVDDSLPVNSKGQLAVAHSVDTLELWPILLSKAIYTMYTACLYTF----------GDKAPSDLLPIFRSSPG 288          
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: A0A0P1AB99_PLAHL (Cytosolic Ca2-dependent cysteine protease (Calpain), large subunit (EF-Hand protein superfamily) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB99_PLAHL)

HSP 1 Score: 100 bits (248), Expect = 3.600e-17
Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 0
Query:  307 PSGDDIDPAMTAIFKVVGQLSPTLSRTG-------CPLLWEAIYPKTSDEVPCYNPCGLYAIKLFAAGRWRKVEVDDCIPLDATRSPVIAASEDPLELWPLLLSKALY 407
            P GD I  AM + F++V QL  + +R          P LW+AIYP+ SD  P YNP G Y++KLF  GRWR+V++DD +PLD+  + +  +S    ELWP LL KALY
Sbjct:  352 PRGDIIHSAMASYFRIVEQLYHSSNRRNHDGITFSVPFLWQAIYPQDSDGQPVYNPGGKYSVKLFVLGRWRRVDIDDKLPLDSNGNYIYLSSSLKYELWPCLLVKALY 459          
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: A0A397ER62_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ER62_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.930e-17
Identity = 48/126 (38.10%), Postives = 73/126 (57.94%), Query Frame = 0
Query:  290 GAAPDF-LSDDDIAMLGAPSGDDIDPAMTAIFKVVGQLSPTLSRTGCPLLWEAIYPKT----SDEVPCYNPCGLYAIKLFAAGRWRKVEVDDCIPLDATRSPVIAASEDPLELWPLLLSKALYKLY 410
            G+AP   +  + +     P GD +D  + +  +V+ +L   +     P  WEAIYP+T    +  +P  NP G Y +KLF  G+WRK+EVDD +PLD     V+ +S  P E+WP LL+KA+YK++
Sbjct:   86 GSAPVIEIEPNSVVKPSVPEGDYVDSPLASGCRVISRLVDRMVANQ-PYFWEAIYPQTVTATNRRIPTVNPGGKYLVKLFVMGKWRKIEVDDRMPLDDQGKVVVLSSSQPSEIWPTLLAKAIYKVF 210          
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: W2R2I1_PHYPN (Calpain catalytic domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2R2I1_PHYPN)

HSP 1 Score: 99.0 bits (245), Expect = 8.050e-17
Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = 0
Query:  307 PSGDDIDPAMTAIFKVVGQL---SPTLSRTGCPLLWEAIYPKTSDEVPCYNPCGLYAIKLFAAGRWRKVEVDDCIPLDATRSPVIAASEDPLELWPLLLSKALYKL 409
            P GD I   M + F++V QL   S T +    P LW+AIYP+ +   P YNP G Y++KLF  GRWR++++DD +PLDA    +  AS    E+WP LL KALYK+
Sbjct:  350 PHGDVIHADMASYFRIVEQLYDSSKTSNNCMAPFLWQAIYPQDNTGQPVYNPGGKYSVKLFVFGRWRRIDIDDKLPLDADGKVIYLASSMKNEIWPSLLVKALYKV 455          
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: A0A7S2WPI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPI0_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.080e-16
Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = 0
Query:  315 AMTAIFKVVGQLSPTLSRT-GCPLLWEAIYPKTSDEVPCYNPCGLYAIKLFAAGRWRKVEVDDCIPLDATRSPVIAASEDPLELWPLLLSKALYKLYRL 412
            A T+   V G+   +  +T   P LW AIYP+     P YNP G Y IKL+ +G WR +++DD +PLDA+   V A++  PLELWP+LLSKA+Y +  L
Sbjct:   76 AQTSRVPVTGRQGTSPEKTRDSPFLWGAIYPQDDQGRPVYNPMGRYVIKLWCSGAWRGLDLDDWMPLDASGECVFASTVHPLELWPMLLSKAVYWVMHL 174          
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Match: A0A7S3HP67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HP67_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 7.350e-16
Identity = 45/134 (33.58%), Postives = 72/134 (53.73%), Query Frame = 0
Query:  307 PSGDDIDPAMTAIFKVVGQLSPTLSRTGCPL-------------------------LWEAIYPKTSDEVPCYNPCGLYAIKLFAAGRWRKVEVDDCIPLDATRSPVIAASEDPLELWPLLLSKALYKLYRLGGY 415
            P G +IDP +   +++V + +PT+ +    L                         LW AI+P+  +  P  NP G Y ++L+  G+WR+V VDD +P+ A  +P +A+S + LELWP+LL+KA+Y +Y   GY
Sbjct:  212 PKGGEIDPFLCGAYRLVQRFTPTIVKARLNLAVVKEAVAGAEEGIEEERHIIQDTFLWRAIHPQLPNGKPVVNPAGKYCVRLYLCGKWRRVYVDDAVPVTAEGAPALASSSETLELWPMLLAKAIYAVYSACGY 345          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMH7_ECTSI4.640e-10657.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMH9_ECTSI5.210e-5349.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMH8_ECTSI6.720e-2232.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4C107_PYTIN1.470e-1944.04Calpain catalytic domain-containing protein n=1 Ta... [more]
A0A482RSF0_9ARCH2.800e-1737.41Calpain catalytic domain-containing protein (Fragm... [more]
A0A0P1AB99_PLAHL3.600e-1746.30Cytosolic Ca2-dependent cysteine protease (Calpain... [more]
A0A397ER62_9STRA4.930e-1738.10Calpain catalytic domain-containing protein n=1 Ta... [more]
W2R2I1_PHYPN8.050e-1746.23Calpain catalytic domain-containing protein n=14 T... [more]
A0A7S2WPI0_9STRA1.080e-1645.45Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3HP67_9STRA7.350e-1633.58Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1878..1905
NoneNo IPR availablePANTHERPTHR46298FAMILY NOT NAMEDcoord: 37..410
coord: 1285..1915
IPR001300Peptidase C2, calpain, catalytic domainPFAMPF00648Peptidase_C2coord: 338..410
e-value: 1.0E-7
score: 31.3
IPR001300Peptidase C2, calpain, catalytic domainPROSITEPS50203CALPAIN_CATcoord: 293..410
score: 11.081
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 337..416

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:150828..170367 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15392.1mRNA_C-linearis_contig79.15392.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig79 150828..170367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig79.15392.1 ID=prot_C-linearis_contig79.15392.1|Name=mRNA_C-linearis_contig79.15392.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1922bp
MPPKAKDKKGKQELLPTGVDYTRRPLPATEPCDARPTPRRELPVVSAHHS
FEEWDEDSLAEMEWGTAGAETFFEDKDGRCFLPAKMAARVVRWVRPRDLI
AQKKDLDGEEELQQGGKGATGGAEKGKASGGADKGKAKPPKGKDKAPASE
PSVLADAAADEEGNPLPRVVIPAPTEAVPGDIGDDRGNGKPDAADTPGQA
PDKVSHGTIPTRGFKTAWSTEQRQQIASLLRSKGAQQQQPQQQQQAPPGS
SSDVNETPVGGRETPPEEAVEGNGNLGDGRKASPEEGGSGAAPDFLSDDD
IAMLGAPSGDDIDPAMTAIFKVVGQLSPTLSRTGCPLLWEAIYPKTSDEV
PCYNPCGLYAIKLFAAGRWRKVEVDDCIPLDATRSPVIAASEDPLELWPL
LLSKALYKLYRLGGYDLALAQEVSAITGDAAARDEGPAHASTPGGAMNGS
VATREDSDEDVGDGRVDEADQARFVAFVLHSLAGESWWIPSVASGLSAET
ALMEGTPGLTPDDLSFPALPPVDVEEEAARERLEERKRRQALFLHKKRRP
RKIVSAEERAEVDSARLTKIRAVTQKLLQGTRREVYVVCMPGKPAYPVLA
VCPEVPLEKQNATACQNGPSSAAAPSPEQQQGVVTAVTAGVGTSSSFSNV
TAPSTAPTMPTRAEAAATATASTGDEKNQPLGFLLKWETPKTPKQTAAVA
SGDAEAAVGRQQQHEGLGRGGRGGGSGDEGNEEQENRVLYGSGGRRRGHG
KVRCRHTAPTRAATSAEVPACLWLSPREIELVGGTVVRALTKIDTLVYAD
VQYHWKPVSRNEHAETPDAGNEKAAGSKDAKAKAKGKAAGKGKDKGKDKD
KDNTPAKGKAVKAGSTSGGNSSPEAPSADIAVAETEQRAPPGTVMVGGVV
VPKGLEGVRARDPGSPPAIFLLVTPSPRLAREVSAKNGFREFMSSNAPSD
IPGEIPELDGALSEPPPTGIENTENDENNESKENNHNPPEVTVGGTGGNA
TLDDENPTGIEEGGDEQDNVSSGVPDAQEEEEEEEAEILMCLWVDKPGIG
GGVGGTSSQPSSSRSNTHATVVLQEVLPGVSGQYARGEFSKPVPGGRVVM
CARYDPHRSGLPFTATSAKVRLTKGGAPRVFRVLLQPGVGCCVGFCCTHA
IETGDAGQVWAEAGYNQVTETGKYEGARPGEWKVLLRRAFRMSAELSPAD
QSDGGVGSGVSEETKTSAPETALELAGAQEEKAAFHGSEGGDGTSTIAIA
GNGGEPVGNPSEESLSVSRVPSAKDFCFVKAILHLPDEDSRPSVCLAFVD
EDTGLEMVQPTLHTNAVPLKPNKRGYSLLAVACGRAKAIPKGAWRLQLLS
DRPLLPLEDSTGNKEGVSDSSPGAERSVSAGGEGVETGQEGSTTVVSCQD
RAVYGGVYVPNKYLLFFRDVLTCASPLPFAIRLRCSHPGTCLRLKFLDAA
TGETLRDLRGRHVLQAKSNPSNPSAAEAPAKGVGKGKTAPPEAAEKTVAA
PGKMIVEAALDWTKMEQVPLHPLVSKLPHYFQPTPEDLPHFCPPLSKATS
RTSPRASASEHPQEHGNGAEEGSREYEGGGGGDRLRSSNTEDSSSLTTSN
TVSAATGPASSSAAPGSASSSPEDAATDPNDSGAAPTSARSSETALEPLR
WWLEIMGAGEVGMAHDTTRVDRENAEVESWEIAEPGRAGRAALLWNQRQA
SKVARLGNGDTSVLPPSSPSAETNASAVSANANADANPSPGAEGYEDWIK
ARAAAVGVPVALEKERQARRLALSTAPATDTTMPVAPSSGSSSSTRASSS
APCPPKPAVLIGQEELKQRAKEREALRQATAEFEKKWEEDRIKTVEAGKE
HMAMQVKFIRGREEQIKEARLPFLHDRDAIVQDMIAKAEARKEALEEERA
ALEPTSKGAKGKQAKGKPGKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001300Peptidase_C2_calpain_cat
IPR038765Papain-like_cys_pep_sf