prot_C-linearis_contig78.15368.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig78.15368.1
Unique Nameprot_C-linearis_contig78.15368.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length255
Homology
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: D7G8U3_ECTSI (Ribosomal_L2_C domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=D7G8U3_ECTSI)

HSP 1 Score: 502 bits (1293), Expect = 1.110e-179
Identity = 244/254 (96.06%), Postives = 251/254 (98.82%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQEKE 254
            MGKVIRGQRKGKGGIFTSHTRLRKGPVK RKLDYAERHGYIKGV+KD+IHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMP+ SMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDE+KGTSK+RLPSGSKKT+SSDCRAMVGIVAGGGRTDKPMLKAGRAYHK+RVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR EKE
Sbjct:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKLRKLDYAERHGYIKGVVKDLIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPVRSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEEKGTSKLRLPSGSKKTISSDCRAMVGIVAGGGRTDKPMLKAGRAYHKFRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRTEKE 254
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: A0A7S2V227_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S2V227_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 1.400e-158
Identity = 214/251 (85.26%), Postives = 234/251 (93.23%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 251
            MGKVIRGQRKGKG +F SHT+ RKG VKFRKLDYAERHGY+KGV+K I+HEPGRGAPLA V F+NPY+FK+D EL+VAVEGMYSG FIYCGKKA LT+GNIMP+G+MPEGTVC +IEA  GDRGTFARCSGDYAV+ISHDEDKGTS+IRLPSGSKKT+ S CRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST+NRLASAG+KVGLIAARRTGRLRGI++
Sbjct:    1 MGKVIRGQRKGKGSVFVSHTKNRKGAVKFRKLDYAERHGYVKGVVKQILHEPGRGAPLAVVAFKNPYRFKKDTELMVAVEGMYSGMFIYCGKKAILTIGNIMPVGAMPEGTVCCNIEAAPGDRGTFARCSGDYAVVISHDEDKGTSRIRLPSGSKKTIKSLCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTSNRLASAGKKVGLIAARRTGRLRGIKK 251
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: A0A835ZD66_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD66_9STRA)

HSP 1 Score: 445 bits (1144), Expect = 6.620e-157
Identity = 208/254 (81.89%), Postives = 236/254 (92.91%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQEKE 254
            MGKVIRG RKG+G +FTSHTRLRKGPVK RKLDYAERHGYIKGV+K+IIHEP RGAP+AK+QFQNPY++K+DNELIVA EGMY+G FIYCGKKA LTVGNI+P+GSMPEG+V  ++E++ GDRG+ ARCSGDYAV+++HDEDKGT+KIRLPSGSKKT+ S+CRAMVGI+AGGGRTDKP+LKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  RLASAGQKVGLIAARRTGRLRGI++  E
Sbjct:    1 MGKVIRGCRKGRGTVFTSHTRLRKGPVKLRKLDYAERHGYIKGVVKEIIHEPARGAPIAKIQFQNPYEYKKDNELIVAAEGMYTGMFIYCGKKAQLTVGNILPVGSMPEGSVICNVESRPGDRGSLARCSGDYAVVVTHDEDKGTTKIRLPSGSKKTIFSNCRAMVGIIAGGGRTDKPLLKAGRAYHKYRVKRNEWPRVRGVAMNPVEHPHGGGNHQHIGHPSTTKRLASAGQKVGLIAARRTGRLRGIKKTSE 254
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: A0A7R9UAP5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAP5_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 6.160e-146
Identity = 191/251 (76.10%), Postives = 227/251 (90.44%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 251
            MGKV+RG RKGKG +F SHTRLRKGP K R+LD++ER GY+KG++K+I+HEPGRGAPLA++QFQNPYK+++DNEL+V  EGMYSGQFI+CGKKA L+VGNI+PLG +PEGTV  ++E+ +GDRG   + SG Y V+I+ DEDKGTS+IRLPSG+KKT+S+ CRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWP VRGVAMNPVEHPFGGGNHQHIGHPST NR+ SAG+KVGLIAARRTGRLRG+++
Sbjct:    1 MGKVVRGCRKGKGSVFKSHTRLRKGPAKLRRLDFSERTGYVKGLVKEILHEPGRGAPLARIQFQNPYKYQKDNELMVCAEGMYSGQFIFCGKKADLSVGNILPLGQLPEGTVVCNVESYIGDRGNLIKTSGGYGVVITQDEDKGTSRIRLPSGAKKTLSNKCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPFGGGNHQHIGHPSTTNRMCSAGKKVGLIAARRTGRLRGVKK 251
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: F0YEL9_AURAN (Ribosomal_L2_C domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEL9_AURAN)

HSP 1 Score: 414 bits (1064), Expect = 9.840e-145
Identity = 194/251 (77.29%), Postives = 221/251 (88.05%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 251
            MGKVIRG RKGKG IFT+HTRLRKGPVK RK DYAE+ GY+KGV+K I+HE GRGAP+AKVQFQN Y+F+RDNEL VA EG+Y G FIYCG KA L VGN++P+ ++PEGTV  + EA+ GDRG FARCSGDYAV+++HDED GT+K+RLPSG KKTV S CRAM+GIVAGGGRTDKPMLKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R+ SAG+KVGLIAARRTGRLRG+++
Sbjct:    1 MGKVIRGCRKGKGTIFTAHTRLRKGPVKLRKADYAEKTGYVKGVVKAIVHESGRGAPIAKVQFQNSYRFQRDNELFVAAEGLYEGAFIYCGAKAQLAVGNVLPISAIPEGTVICNAEARPGDRGAFARCSGDYAVVVTHDEDHGTTKLRLPSGGKKTVKSVCRAMIGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTTKRICSAGKKVGLIAARRTGRLRGLKK 251
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: A0A7S2WUG0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUG0_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 3.350e-142
Identity = 194/248 (78.23%), Postives = 217/248 (87.50%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRG 248
            MGKV RGQRKGKG IF SHTRLR G VK R LDYAER G+ KGVIKD +HEPGRGAP+AKVQF N Y++KRDN L VAVEGMY+GQF+YCGKKA LTVGNI+PLG+MPEGT+  +IEAK GDRG  A+CSGDYAV+++HDEDKGT+++RLPSGSKKT+S+ CRA VGIVAGGGRTDKP+LKAGRA+HKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R   AG+K GLIAARRTGRL G
Sbjct:   20 MGKVTRGQRKGKGSIFKSHTRLRVGEVKQRALDYAEREGFTKGVIKDFVHEPGRGAPVAKVQFHNAYRYKRDNNLFVAVEGMYTGQFLYCGKKAKLTVGNILPLGAMPEGTIVCNIEAKPGDRGKMAKCSGDYAVVVTHDEDKGTTRVRLPSGSKKTLSNKCRAAVGIVAGGGRTDKPLLKAGRAFHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTTRREDPAGKKAGLIAARRTGRLAG 267
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: A0A418F530_9STRA (Ribosomal_L2_C domain-containing protein n=14 Tax=Saprolegniaceae TaxID=4764 RepID=A0A418F530_9STRA)

HSP 1 Score: 402 bits (1034), Expect = 3.520e-140
Identity = 186/251 (74.10%), Postives = 220/251 (87.65%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 251
            MG+VIRGQRKG GGIF SH + RKG   FR  DY ER GYIKGVIK+IIH+PGRGAPLA+V F++PYK++ ++EL++A EGMY+G FIY GKKA++ VGNI+PL  +PEGT+  ++EA++GD+G FARCSGDYAV+++HDEDKG +KIRLPSGSKKT+ S CRAMVG+VAGGGRTDKP+LKAGRAYHKYRVKRNEWPHVRGVAMNPVEHP GGGNHQHIGHPST  R   AG+KVGLIAARRTGRLRGI++
Sbjct:    1 MGRVIRGQRKGAGGIFKSHVKTRKGKAAFRTNDYVEREGYIKGVIKEIIHDPGRGAPLARVSFRDPYKYRINHELLIAAEGMYTGMFIYAGKKATMAVGNILPLSQLPEGTIVCNVEARIGDKGKFARCSGDYAVIVTHDEDKGKTKIRLPSGSKKTIPSACRAMVGVVAGGGRTDKPILKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPHGGGNHQHIGHPSTVKRDPPAGKKVGLIAARRTGRLRGIKK 251
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: I2CPH3_NANGC (Large subunit ribosomal protein L8e n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH3_NANGC)

HSP 1 Score: 400 bits (1029), Expect = 2.110e-139
Identity = 189/254 (74.41%), Postives = 222/254 (87.40%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQEKE 254
            MGKVIR  RKG GGIF SHT+L K PVK RKLDYAE+HGYIKGV+K+I+HE GRGAP+A+VQF+N Y+FKRD E  VAVEG+YSGQFI+ GKKA+L +GN++PL  +PEGTV S++EA+ GDRG+FAR SG YAV+++ DED+GT+KIRLPSG+KKTVSS  R ++GI+AGGGRTDKPMLKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R A AG+KVGL+AARRTGRLRGI++  E
Sbjct:    1 MGKVIRTCRKGVGGIFKSHTKLNKNPVKLRKLDYAEKHGYIKGVVKEIVHESGRGAPIARVQFKNAYRFKRDTESFVAVEGIYSGQFIFAGKKAALVIGNVLPLSQIPEGTVVSNVEARPGDRGSFARTSGGYAVIVAQDEDRGTTKIRLPSGAKKTVSSSSRGVIGIIAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTVKRDAPAGKKVGLVAARRTGRLRGIKKNAE 254
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: K3X5U7_GLOUD (Ribosomal_L2_C domain-containing protein n=5 Tax=Eukaryota TaxID=2759 RepID=K3X5U7_GLOUD)

HSP 1 Score: 400 bits (1028), Expect = 2.890e-139
Identity = 185/251 (73.71%), Postives = 223/251 (88.84%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 251
            MG+VIRGQRKG GGIF SHT  R+G   FR LDY ERHGYIKGV+K+IIH+ GRGAPLA+V +++PY++K ++EL++A EGMY+GQFIY G KA++TVGNI+PL ++PEGT+  ++EA+VGDRG+FAR SGDYAV+++HDEDKG +K+RLPSGSKKTV S CRAM+G+VAGGGRTDKP+LKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R A +G+KVGLIAARRTGRLRGI++
Sbjct:    1 MGRVIRGQRKGAGGIFKSHTAKRQGAAAFRSLDYVERHGYIKGVVKEIIHDSGRGAPLARVTYRDPYRYKLNHELLIAAEGMYTGQFIYSGAKAAMTVGNILPLSALPEGTIVCNVEARVGDRGSFARASGDYAVIVTHDEDKGRTKLRLPSGSKKTVPSACRAMIGVVAGGGRTDKPILKAGRAYHKYRVKRNEWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDAPSGKKVGLIAARRTGRLRGIKK 251
[Close]
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Match: A0A7S1U069_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U069_9STRA)

HSP 1 Score: 400 bits (1028), Expect = 3.100e-139
Identity = 186/251 (74.10%), Postives = 218/251 (86.85%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 251
            MGKV++  RKGKG +F SHTRLRKG V+ R LD+ ER GYIKG++KDIIHEPGRGAPLAKVQF N Y++K+DN L+VA EGMY+GQFI+CGKKA L VGNI+PLG +PEGTV  ++E   GDRG   + SG Y V+I+ DEDKGT++IRLPSG+KKT+S+ CRAMVGIVAGGGRTDKP+LKAGRAYHKYRVKRNEWP +RGVA NPVEHPFGGGNHQHIGHPST NR+ SAG+KVGLIAARRTGRLRG+++
Sbjct:    1 MGKVVQACRKGKGSVFKSHTRLRKGKVQMRALDFGERTGYIKGIVKDIIHEPGRGAPLAKVQFNNAYEYKKDNTLLVAAEGMYTGQFIFCGKKAQLAVGNILPLGQLPEGTVVCNVETYAGDRGNLIKTSGGYGVVITQDEDKGTTRIRLPSGAKKTLSNKCRAMVGIVAGGGRTDKPLLKAGRAYHKYRVKRNEWPKIRGVAKNPVEHPFGGGNHQHIGHPSTTNRMCSAGKKVGLIAARRTGRLRGVKK 251
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8U3_ECTSI1.110e-17996.06Ribosomal_L2_C domain-containing protein n=3 Tax=E... [more]
A0A7S2V227_9STRA1.400e-15885.26Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A835ZD66_9STRA6.620e-15781.89Translation protein SH3-like domain-containing pro... [more]
A0A7R9UAP5_9STRA6.160e-14676.10Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
F0YEL9_AURAN9.840e-14577.29Ribosomal_L2_C domain-containing protein n=1 Tax=A... [more]
A0A7S2WUG0_9STRA3.350e-14278.23Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A418F530_9STRA3.520e-14074.10Ribosomal_L2_C domain-containing protein n=14 Tax=... [more]
I2CPH3_NANGC2.110e-13974.41Large subunit ribosomal protein L8e n=1 Tax=Nannoc... [more]
K3X5U7_GLOUD2.890e-13973.71Ribosomal_L2_C domain-containing protein n=5 Tax=E... [more]
A0A7S1U069_9STRA3.100e-13974.10Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002171Ribosomal protein L2SMARTSM01383Ribosomal_L2_2coord: 11..90
e-value: 1.4E-31
score: 120.9
IPR002171Ribosomal protein L2PIRSFPIRSF002158RPL2p_RPL2a_RPL8e_RPL2ocoord: 1..254
e-value: 6.4E-68
score: 226.9
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 1..252
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 96..231
e-value: 6.2E-66
score: 235.0
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 98..221
e-value: 1.6E-44
score: 151.2
IPR022666Ribosomal Proteins L2, RNA binding domainPFAMPF00181Ribosomal_L2coord: 11..90
e-value: 8.9E-16
score: 57.6
IPR014726Ribosomal protein L2, domain 3GENE3D4.10.950.10coord: 170..247
e-value: 1.5E-40
score: 139.3
NoneNo IPR availableGENE3D2.40.50.140coord: 1..86
e-value: 1.9E-40
score: 138.9
NoneNo IPR availablePANTHERPTHR13691:SF1660S RIBOSOMAL PROTEIN L8coord: 1..252
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 90..169
e-value: 1.2E-31
score: 110.2
IPR022671Ribosomal protein L2, conserved sitePROSITEPS00467RIBOSOMAL_L2coord: 197..208
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..97
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 99..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:643121..645876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15368.1mRNA_C-linearis_contig78.15368.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig78 642100..645876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig78.15368.1 ID=prot_C-linearis_contig78.15368.1|Name=mRNA_C-linearis_contig78.15368.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=255bp
MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIH
EPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGN
IMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRL
PSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVR
GVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR
QEKE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002171Ribosomal_L2
IPR022669Ribosomal_L2_C
IPR022666Rbsml_prot_L2_RNA-bd_dom
IPR014726Ribosomal_L2_dom3
IPR014722Rib_L2_dom2
IPR022671Ribosomal_L2_CS
IPR012340NA-bd_OB-fold
IPR008991Translation_prot_SH3-like_sf