mRNA_C-linearis_contig111.1480.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig111.1480.1
Unique NamemRNA_C-linearis_contig111.1480.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A6H5KK36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK36_9PHAE)

HSP 1 Score: 572 bits (1473), Expect = 4.880e-193
Identity = 389/501 (77.64%), Postives = 411/501 (82.04%), Query Frame = 3 
Query:   96 MDIYADLPSAKPASD-ATASSSAKASTPASASKGSWAHSKFQGMIANRRTVKAATSRMAPPTLKRPGPL-TPGARATKAKTKAEGSTPTNPKGAPSPPASRPQTWDMGFGDVDDDYDPANPNDYMDYCKERINKKKQEEXXXXXXXXXXXXXXXXXXXXXXRAATIRKIQEAAAKSHE-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVGDMAALEATMGRXXXRGLSNLPAWMTKGKGTGPGSKESLPEPPTPGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGT--ESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEEK 1583
            MDIYADLPSAKP+++ A AS          ASKGSWAHSKFQGMIANRRT KAATSRMAPPTLKRPG     GAR  K  +KAE S     K   SP A+RPQ+WDMGFGDVDDDYDPA PNDYM+YC+ERI+KKKQEE  XXXXXXXXXXXXXXXXXXXXRAATI+KIQEAAAKSHE G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    D+AA++     XXX  LSNLPAW+TKGKG  PGS E L EPPTP R P P VPGQ D V E G+R GRFGPQ K G GAG+G G+  ESGMNFAERMMAKMGH +GQGLGAS+QGISQPLQSM+AGGGMGVIDMH +DKKRMGGPSDTPAP AARKKRGLFSNPTRVLLLKNMVGPGEVDDELE ETSGECERFGPVRRCLIYEIK               GGDTPDT+RVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQ DEEK
Sbjct:    1 MDIYADLPSAKPSANVAVASPXXXXXXXXXASKGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGXXXAAGARPNKTISKAESSXXXXXKETTSPAATRPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERDXXXXXXXXXXXXXXXXXXXXRAATIKKIQEAAAKSHEVGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXXLSNLPAWVTKGKGATPGSPEML-EPPTPARRPPP-VPGQLDAVPEAGQRGGRFGPQAKAG-GAGIGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAP-AARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK---------------GGDTPDTERVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQADEEK 482
[Close]
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: D7FL75_ECTSI (DNA-damage repair protein drt111, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL75_ECTSI)

HSP 1 Score: 474 bits (1221), Expect = 2.820e-155
Identity = 338/479 (70.56%), Postives = 364/479 (75.99%), Query Frame = 3 
Query:   96 MDIYADLPSAKPASDATASSSAKASTPAS-ASKGSWAHSKFQGMIANRRTVKAATSRMAPPTLKRPGPLTP-GARATKAKTKAEGSTPTNPKGAPSPPASRPQTWDMGFGDVDDDYDPANPNDYMDYCKERINKKKQEEXXXXXXXXXXXXXXXXXXXXXXRAATIRKIQEAAAKSHE-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVGDMAALEATMGRXXXRGLSNLPAWMTKGKGTGPGSKESLPEPPTPGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGT--ESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIA 1517
            MDIYADLPSAKP++D   +S+A      S ASKGSWAHSKFQGMIANRRT KAATSRMAPPTLKRPGP +  GAR +K                PSP ASRPQ+WDMGFGDVDDDYDPA PNDYM+YC+ERI+KKKQEE        XXXXXXXXXXXX  RAATI+KIQEAAAKSHE G  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    D+AA++     XXX GLSNLPAW+TKGKG  PGS               P +P   D V E G+R GRFGPQ K G GAG+G G+  ESGMNFAERMMAKMGH +GQGLGAS+QGISQPLQSM+AGGGMGVIDMH +DKKRMGGPSDTPA PA RKKRGLFSNPTRVLLLKNMVGPGEVDDELE ETSGECERFGPVRRCLIYEIK               GGDTPDT+RVRIFVAFEKQESAVK  L+  GR  GG+  A
Sbjct:    1 MDIYADLPSAKPSADVAVASAAXXXXXXSPASKGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGPPSAAGARPSKXXXXXXXXXXXXXXETPSPAASRPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERDRELKIIXXXXXXXXXXXXEERAATIKKIQEAAAKSHEVGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXGLSNLPAWVTKGKGGTPGS---------------PEMP--LDAVPEAGQRGGRFGPQAKAG-GAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAAPA-RKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK---------------GGDTPDTERVRIFVAFEKQESAVKGLLDELGR--GGKMGA 443
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BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A6U3SBK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SBK6_9STRA)

HSP 1 Score: 183 bits (465), Expect = 2.130e-49
Identity = 103/197 (52.28%), Postives = 123/197 (62.44%), Query Frame = 3 
Query:  996 ESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAP-PAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEEK 1583
            + G N A  MM  MG T G+GLG   QGIS+PL++   GGG G +    A   +    S  P P PAA+KKR LF NPT VLLLKNMVGPGEVD ELE E   EC +FGPVR C++YE+K                G  PD Q VR FVAFEKQESA+KA+L+M GRFF GRQI  +F+ E +F   DL PQ D+E+
Sbjct:   25 KGGGNLAMNMMKGMGWTDGEGLGREGQGISRPLEARPTGGGQGAVANPGARGNQKLSTSMLPPPGPAAKKKRALFRNPTTVLLLKNMVGPGEVDSELEKEVQEECSKFGPVRTCVVYELK----------------GAPPD-QAVRTFVAFEKQESAIKAFLDMEGRFFAGRQIRCAFFNETRFRNRDLVPQGDDEE 204
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BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A835ZCV1_9STRA (Putative DNA-damage repair protein drt111 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCV1_9STRA)

HSP 1 Score: 181 bits (459), Expect = 4.200e-46
Identity = 152/397 (38.29%), Postives = 182/397 (45.84%), Query Frame = 3 
Query:  405 DMGFGDVD--DDYDPANPNDYMDYCKERINKKKQEEXXXXXXXXXXXXXXXXXXXXXXRAATIRKIQEAAAKSHEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVGDMAALEATMGRXXXRGLSNLPAWMTKGKGTGPGSKESLPEPPTPGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARK--------KRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEP 1565
            + GF D D  D YDPA PNDYM YCK RI  K+QEE                      R   ++ I E        XXXXXXXXXXXX                       P    A      GR   RG+ NLPAW+TK +  G               G                                     +  GM  A+ +MAKMG  +G+GLG S QGISQP+ + + G GMG + MH AD+KR       PA  A           KRGLFSNPT VLLLKNMVG GEVD +LE E   EC ++GPVR+CL+ E                     P  + V  FVAFE+QESA+KAYL+MNGRFFGGRQI A+FY+E KF+  +  P
Sbjct:   82 ESGFNDRDVPDPYDPARPNDYMAYCKYRIETKRQEE----------------------RERELKAIMEEQRXXXXXXXXXXXXXXXXXLPPQLQAKLGAAPLLPPMAGLAPP----AVPGPPAGRGRGRGMVNLPAWLTKMQQEG---------------GKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGGMALAQSLMAKMGWQEGKGLGKSGQGISQPIVAQSTGVGMGTVAMHPADRKR-------PAQAAXXXXXXXXXSAKRGLFSNPTCVLLLKNMVGAGEVDSDLEGEVKEECMKYGPVRQCLVRE-----------------HAGLPADETVWTFVAFERQESAIKAYLDMNGRFFGGRQIGAAFYEEAKFERGEYGP 413
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BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: W7TGN1_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGN1_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.080e-44
Identity = 89/185 (48.11%), Postives = 117/185 (63.24%), Query Frame = 3 
Query: 1026 MAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVID-MHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 1577
            M K+G+ +G GLG  +QGI++ +++ A GGG GVI    Q  K                 KRGLFSNPT+++LLKNMVGPGEVDD+L+ ET+ EC + GPV  CL++E+   +                P+ +RVR FVAFE+QESAVKAY+ MNGRFFGGRQ+ ASF+ E+KF   DL P  +E
Sbjct:    1 MKKLGYQEGAGLGRDRQGITEAIKARALGGGKGVISGPAQGGKGAQDVDRQQXXXXXXXXKRGLFSNPTKIVLLKNMVGPGEVDDDLQGETAEECAKHGPVSECLVFEVNDNSY---------------PEEERVRTFVAFERQESAVKAYVAMNGRFFGGRQVQASFFDEEKFARKDLAPGKEE 170
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BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A7S2W0J2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0J2_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.890e-37
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 3 
Query: 1164 GPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEE 1580
            GP   P     +KKR LF NP+ VLLLKNMVGPGEVD++L++E + EC +FGPVR+C++YE KA                  P+ + VR FVAFEKQESA+KA+L+M GRFF GRQI  +F+KED+F + D  P P+EE
Sbjct:   60 GPGMVPPQGPPKKKRALFRNPSSVLLLKNMVGPGEVDEDLQNEVAEECSKFGPVRQCVVYEHKAPG---------------VPEHEAVRTFVAFEKQESAIKAFLDMEGRFFAGRQIHCAFFKEDRFKSGDFAPSPEEE 183
[Close]
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A7J9F154_9ROSI (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9F154_9ROSI)

HSP 1 Score: 150 bits (379), Expect = 4.590e-37
Identity = 98/234 (41.88%), Postives = 123/234 (52.56%), Query Frame = 3 
Query:  876 RGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 1577
            R PSP  PG+ +G           G  E  G+G G G G    M  A+RMMAKMG  +GQGLG  +QGI+ PL +       GVI             S+T  P    K       PTRVLLL+NMVGPGEVDDELE E   EC ++G V R LI+EI    + P             P  + VRIF+ FE+ E   KA ++++GRFFGGR + ASFY E++F   +L P P E
Sbjct:   59 RSPSPP-PGKAEGFT--------IGKSETSGLGVGAGGGQ---MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIV----------NASETSKPDKKVKSVSFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEI----TEPNF-----------PADEAVRIFIQFERSEETTKALIDLDGRFFGGRIVKASFYDEERFSKNELAPMPGE 255
[Close]
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: G7JHL2_MEDTR (DNA-damage-repair/toleration protein DRT111 n=6 Tax=IRL clade TaxID=2233839 RepID=G7JHL2_MEDTR)

HSP 1 Score: 154 bits (389), Expect = 5.070e-37
Identity = 99/231 (42.86%), Postives = 126/231 (54.55%), Query Frame = 3 
Query:  885 SPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 1577
            SP+ PG  DG +         G  E +G+G G G      M  A+RMMAKMG  QGQGLG  +QGI+ PL +       GVI ++ +D K     SD        K   +   PTRVLLL+NMVGPGEVDDELE E   EC ++G V R LI+EI    + P             P  + VRIFV FE+ E   KA ++++GR+FGGR + A+FY EDKF   +L P P E
Sbjct:  193 SPSPPGSVDGFS--------IGKSETVGLGVGAGGQ----MTAAQRMMAKMGWKQGQGLGKQEQGITTPLMAKKTDRRAGVI-VNASDSK-----SDKKV-----KSVNINGVPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEI----TEPNF-----------PTDEAVRIFVQFERSEETTKALVDLDGRYFGGRTVRATFYDEDKFSKNELAPMPGE 385
[Close]
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A1Q3BH05_CEPFO (G-patch domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BH05_CEPFO)

HSP 1 Score: 151 bits (381), Expect = 4.640e-36
Identity = 99/238 (41.60%), Postives = 131/238 (55.04%), Query Frame = 3 
Query:  870 PGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSN--PTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 1577
            PG  PSP   G  DG           G  E  G+G G G      M  A+RMMAKMG  +GQGLG  +QGI+ PL +       GVI ++ +D K     SD       +K +G+  N  PTR+LLL+NMVGPGEVDDELE E + EC ++G V R LI+EI    + P             P  + VRIF+ FE+ E   KAY++++GR+FGGR + A+FY E++F   +L P P E
Sbjct:  170 PGYPPSPPTQGNADGXXXXXXXXFVIGKSETSGLGVGAGGQ----MTAAQRMMAKMGWKEGQGLGKQEQGITTPLVAKKTDRRAGVI-VNASDNK-----SD-------KKVKGVSFNGPPTRILLLRNMVGPGEVDDELEDEVASECAKYGMVTRVLIFEI----TEPNF-----------PTDEAVRIFIQFERSEETTKAYIDLDGRYFGGRVVHAAFYSEERFSNNELAPLPGE 375
[Close]
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A2I4GVE1_JUGRE (DNA-damage-repair/toleration protein DRT111, chloroplastic n=4 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GVE1_JUGRE)

HSP 1 Score: 151 bits (381), Expect = 5.390e-36
Identity = 97/231 (41.99%), Postives = 128/231 (55.41%), Query Frame = 3 
Query:  885 SPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 1577
            SP+ P   DG           G  E +G+G G G      M  A+RMMAKMG  +GQGLG  +QGI+ PL +       GVI ++ ++ K+     D  A     K   +   PTRVLLL+NMVGPGEVDDELE E + EC ++G V R LI+EI    + P             P  + VRIFV FE+ E   KA ++++GRFFGGR + ASFY+E++FD  +L P P E
Sbjct:  190 SPSPPSNGDGFT--------IGKSETVGLGVGAGGQ----MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVI-VNASETKQ-----DKKA-----KSVNINGPPTRVLLLRNMVGPGEVDDELEEEVASECAKYGTVTRVLIFEI----TEPNF-----------PPNEAVRIFVQFERPEETTKALVDLDGRFFGGRVVRASFYEEERFDKNELAPMPGE 382
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK36_9PHAE4.880e-19377.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL75_ECTSI2.820e-15570.56DNA-damage repair protein drt111, putative n=1 Tax... [more]
A0A6U3SBK6_9STRA2.130e-4952.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZCV1_9STRA4.200e-4638.29Putative DNA-damage repair protein drt111 n=1 Tax=... [more]
W7TGN1_9STRA2.080e-4448.11RNA binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A7S2W0J2_9STRA1.890e-3752.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7J9F154_9ROSI4.590e-3741.88Uncharacterized protein n=2 Tax=Gossypium TaxID=36... [more]
G7JHL2_MEDTR5.070e-3742.86DNA-damage-repair/toleration protein DRT111 n=6 Ta... [more]
A0A1Q3BH05_CEPFO4.640e-3641.60G-patch domain-containing protein n=1 Tax=Cephalot... [more]
A0A2I4GVE1_JUGRE5.390e-3641.99DNA-damage-repair/toleration protein DRT111, chlor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:42829..51156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue1.6e-133
Seed eggNOG ortholog2880.D7FL75
Preferred nameRBM17
KEGG koko:K12840
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000380,GO:0000381,GO:0000398,GO:0001654,GO:0001745,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0007423,GO:0008150,GO:0008152,GO:0008380,GO:0009507,GO:0009536,GO:0009653,GO:0009887,GO:0009987,GO:0010467,GO:0010468,GO:0016070,GO:0016071,GO:0019219,GO:0019222,GO:0031323,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048024,GO:0048513,GO:0048592,GO:0048731,GO:0048749,GO:0048856,GO:0050684,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0090596,GO:1901360,GO:1903311
EggNOG free text desc.regulation of RNA splicing
EggNOG OGsKOG1996@1,KOG1996@2759
Ec32 ortholog descriptionG-patch domain
Ec32 orthologEc-19_005230.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03041
Exons10
Model size2793
Cds size1491
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1480.1prot_C-linearis_contig111.1480.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig111 44036..51061 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927480.5219533-UTR-C-linearis_contig111:42828..440351622927480.5219533-UTR-C-linearis_contig111:42828..44035Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 42829..44035 -
1690879725.129552-UTR-C-linearis_contig111:42828..440351690879725.129552-UTR-C-linearis_contig111:42828..44035Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 42829..44035 -
1622927480.6799033-UTR-C-linearis_contig111:51061..511561622927480.6799033-UTR-C-linearis_contig111:51061..51156Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 51062..51156 -
1690879725.266386-UTR-C-linearis_contig111:51061..511561690879725.266386-UTR-C-linearis_contig111:51061..51156Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 51062..51156 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927480.5348547-CDS-C-linearis_contig111:44035..441511622927480.5348547-CDS-C-linearis_contig111:44035..44151Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 44036..44151 -
1690879725.144931-CDS-C-linearis_contig111:44035..441511690879725.144931-CDS-C-linearis_contig111:44035..44151Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 44036..44151 -
1622927480.552244-CDS-C-linearis_contig111:44831..449041622927480.552244-CDS-C-linearis_contig111:44831..44904Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 44832..44904 -
1690879725.15735-CDS-C-linearis_contig111:44831..449041690879725.15735-CDS-C-linearis_contig111:44831..44904Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 44832..44904 -
1622927480.5963898-CDS-C-linearis_contig111:45556..457061622927480.5963898-CDS-C-linearis_contig111:45556..45706Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 45557..45706 -
1690879725.1726322-CDS-C-linearis_contig111:45556..457061690879725.1726322-CDS-C-linearis_contig111:45556..45706Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 45557..45706 -
1622927480.6065738-CDS-C-linearis_contig111:46287..463781622927480.6065738-CDS-C-linearis_contig111:46287..46378Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 46288..46378 -
1690879725.181068-CDS-C-linearis_contig111:46287..463781690879725.181068-CDS-C-linearis_contig111:46287..46378Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 46288..46378 -
1622927480.6167316-CDS-C-linearis_contig111:47076..471761622927480.6167316-CDS-C-linearis_contig111:47076..47176Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 47077..47176 -
1690879725.1892633-CDS-C-linearis_contig111:47076..471761690879725.1892633-CDS-C-linearis_contig111:47076..47176Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 47077..47176 -
1622927480.6271915-CDS-C-linearis_contig111:47691..478901622927480.6271915-CDS-C-linearis_contig111:47691..47890Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 47692..47890 -
1690879725.19853-CDS-C-linearis_contig111:47691..478901690879725.19853-CDS-C-linearis_contig111:47691..47890Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 47692..47890 -
1622927480.6373053-CDS-C-linearis_contig111:48583..488891622927480.6373053-CDS-C-linearis_contig111:48583..48889Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 48584..48889 -
1690879725.207222-CDS-C-linearis_contig111:48583..488891690879725.207222-CDS-C-linearis_contig111:48583..48889Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 48584..48889 -
1622927480.6465394-CDS-C-linearis_contig111:49292..494781622927480.6465394-CDS-C-linearis_contig111:49292..49478Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 49293..49478 -
1690879725.2173028-CDS-C-linearis_contig111:49292..494781690879725.2173028-CDS-C-linearis_contig111:49292..49478Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 49293..49478 -
1622927480.655498-CDS-C-linearis_contig111:49998..501121622927480.655498-CDS-C-linearis_contig111:49998..50112Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 49999..50112 -
1690879725.2276366-CDS-C-linearis_contig111:49998..501121690879725.2276366-CDS-C-linearis_contig111:49998..50112Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 49999..50112 -
1622927480.6660821-CDS-C-linearis_contig111:50905..510611622927480.6660821-CDS-C-linearis_contig111:50905..51061Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 50906..51061 -
1690879725.2482176-CDS-C-linearis_contig111:50905..510611690879725.2482176-CDS-C-linearis_contig111:50905..51061Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 50906..51061 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig111.1480.1

>prot_C-linearis_contig111.1480.1 ID=prot_C-linearis_contig111.1480.1|Name=mRNA_C-linearis_contig111.1480.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=497bp
MDIYADLPSAKPASDATASSSAKASTPASASKGSWAHSKFQGMIANRRTV
KAATSRMAPPTLKRPGPLTPGARATKAKTKAEGSTPTNPKGAPSPPASRP
QTWDMGFGDVDDDYDPANPNDYMDYCKERINKKKQEERDRELKIIMEEQE
RERKRQDEERAATIRKIQEAAAKSHEGAAAAAAGAVQGGAGLGLGLGAGA
AGVSSAGRGRGGPVGDMAALEATMGRGRGRGLSNLPAWMTKGKGTGPGSK
ESLPEPPTPGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGT
ESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQA
DKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESET
SGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAF
EKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEEK*
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mRNA from alignment at C-linearis_contig111:42829..51156-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig111.1480.1 ID=mRNA_C-linearis_contig111.1480.1|Name=mRNA_C-linearis_contig111.1480.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8328bp|location=Sequence derived from alignment at C-linearis_contig111:42829..51156- (Chordaria linearis ClinC8C monoicous)
TGACCATTGACACAGGGGGCAGGGAAGCGTACCGAAGACTACGCAGTCTG
TGTCTATGGAAGTTCGTTGAAGGGTACGCTGGGATCAAGGAAACGATGGA
CATATACGCGGACCTTCCGTCCGCCAAGCCTGCCTCGGACGCGACCGCCT
CATCATCAGCCAAGGCCTCTACTCCCGCGTCCGCTTCCAAGGGATCATGG
GCCCACTCCAAGTTTCAGGGGATGATTGCCAACAGAAGGACGGTCAAGGC
GGTGAGTGTGTCTGTTTGCTTTACCGCAGATTGTTGGCGGGAGCTTTTGT
GCAAGCAGTCTTTCGCTGCGTGAACCATCTCCCCAAAAGGTCAAGGTTGT
CAAATAGCGGCGGAATCACTATCCCGTTGGCCCTTACCTTCAGTTTAGCG
TAGTAATTTCAACACACAGCTCACAGTAATGGGGGACATGGAGTGCGGAA
CAGCCGGCAGTGACTGGCAATCACGACTAATCTTGCTCAGTGCGCAGACC
GAGCTGTGACATGTGCATCCATCTGTCAACAAAATCCTTCAGTCTTGGGT
CCGATCCTGCTTACCCCGGCGAAGCGAGAGTAGGCGGTGTGTGACCCTGG
TGGATCCGTTGCCCATACCTACCCTCCCTTTGCATACGTAGGGCCTCTCT
CATGATGGTATTTTCCACTTGATTGTAGGCAATCGTAGCCCTGCAGGTCG
AATTCTGCAGGCCACGGGTTGGTATCTACGGCAGGAGCGTGAAATGCGAA
TGCCGATCCTATTTTGTGCCCCCAGTCACGAGCCTCAAAAACCTGAACCC
GCCTTCCTCTGGACGAGATTCCGTACACCCTTTACCACTATCGTCATCCC
TCCCCCCCTCCCGTTTTCCTCTGGCCGAAAACTAGTGCCTGTTATTGGCG
CGATCGCCAACATCATCACCCCCGTCTTCCTCCGCTTCCGCGGCGCCACT
CGCTGATTCATGGTTCACGATGTGTACCGTGTTCTGATGTCACGTCTCTC
TTACTCTCGTAGCACCCTACTGCTGTACCTTGCCAATGAACCAGGCGACA
TCGAGGATGGCGCCCCCGACGTTGAAGCGACCGGGCCCCCTAACCCCCGG
CGCTCGGGCTACTAAGGCCAAGACCAAGGCGGAGGGCTCTACTCCCACGA
ACCCAAAGGTATTGCATGACACATCGCCCCCGCCACCCCCAAACGGAGAG
GCTTCTGAAGAGCCTCACACTGTATGGTTTGTGGGCGACAAGAACGTTAA
CGCTGAGAGCGTTGTGGTGTACAATATGGAGCACTGTACGCCAGGTGTTA
TAGTACTTTCGGCATGTTTGTCCCAGGGAAACGCGGCATGACCGCGCCCT
GCAAGACAAAAGCAGAGGGAGAGACCGAGAGGGAGAGACCGCACCAGTGC
TAATTTAACAATAAAAGTCAACAAACCGGCAGTCTGCGATGTGCGTCCAT
GCTACTTAAGACTACCGCCGAAAACGTTTGGCACCGAGGGGATGCACCAT
TGATATGCATGAATAGACGAGACGGGAAATTATCCTCGAACAGCGTGGAA
ACCGGTTAGCCGCCGCCACCGCCTTCGAACCAGCTTGGCTGCCCTGCAGC
CACCCAAAAAAAGAGTGAACAACGCGTGAAACCTCCGCCTGCCAACCCCA
ACGTCCTCGCTGCCCGTGTTTCCTACAGGGAGCGCCGTCGCCGCCTGCCA
GTCGGCCGCAGACATGGGACATGGGCTTTGGGGACGTGGACGATGATTAT
GATCCCGCCAACCCCAACGACTACATGGACTACTGCAAAGAGAGGATCAA
CAAGAAGAAGCAGGAGGAGCGGGATAGGGAGCTCAAGATCATCATGGAGG
AGCAGGAGCGGGAGGTGGGTGGGTGATAGTTTTCTCGATGAACGGGAGAG
CTCAGTGTGCAACACCCCGTCACCCGCGCTGCAGCAGCAGCAGCAGCAGC
AGCAGCGACCTCACCCTTACATCTGAACTTTTATCTTCGTTCCTCATCTT
GCTAGATACCTTCGATCCTGCTGCCTGTACAACACGAGTAGTGACCAAAG
ACAACCAATTCTCACACACACACATGCTCTCTCTCTCTCTCTCCCCCCCA
TCCCTGTATCCCTCGTCCTTTCTTCCGCCCTTGCCACCCTGCGGCACCCT
CACCGCCTCTACCACACCACCCTTCGCTCATTCCTACCACATCACTCCTG
CCACCAACTATGTATTTTTGACACATGCCATCGTATGCCATCGTATGCCA
AACAACACCGAACACAGCGAAAACGGCAAGATGAAGAGCGAGCAGCAACG
ATCCGCAAGATCCAAGAGGCGGCGGCAAAGTCCCACGAGGGTGCTGCAGC
GGCAGCAGCGGGGGCGGTGCAGGGCGGCGCCGGACTCGGGCTCGGACTTG
GAGCCGGCGCAGCAGGCGTCAGCAGCGCGGGACGCGGGCGAGGGGGGCCC
GTGGGGGACATGGCGGCCCTGGAGGCGACGATGGGGCGCGGGCGAGGTCG
CGGGCTGTCGAACCTCCCGGCGTGGATGACGAAGGGCAAGGGGACGGGGC
CGGGATCTAAGGAGAGCTTACCGGTGAGATTTTTTCTTGTTGTGTGTGCT
GGAAGGCGTTTTTGGGGCCCCGGGCGGGGTCGGGAGGACGTTTGTTGTTG
TCTTTGTACTCACGGTTCGTCCGTTGATCAGCGTCACTGAACGAGGTCAT
CCATTCCCTTGCACCTTTTTGGAGGCCATCAATGAACATGTCGCAATCGA
TGACGAACCGTCTATTTTTTCCCCAAAGGTTTTGTTGTACGTCCGTGTGA
CCGTGTGAGTTGTTCACCCGGGGAGGAAATAACGTGAGATACGGTGTTTG
TTTCTGTTGCCGCTGCTACTGCTGTGACTGACTGGCCGATTTCATTCATA
CGTTTTCTATCGAGGCCCGAAACGAGGGCGTTTGGGTTCGTGGGCGGAGT
CCCCGCGGAAGTTCTGTGCGTGTACAGTAGGGCACAAGGGGCGTCGGCTA
GATGAGTTGTTTCTACCGAAAGAGGAGAAAATAAACGAGAAGAGAGAGCA
CCCCGCGGAATTTTGTCGGACACCCATCTCTTTACCCATGCCGTAGTTGT
CGGCCTGTGCACACCACATAATTTTTCACACCGTATAGAAGGACGGATCA
GCTTGTCTGCGCTCTTCTGAGCCATGTACTACTGTAGCTCGTCGGAAAAC
CGGACAATTAAAACAGAGAAGATGAACCACCACCCCCTTCCCGCGCGCAA
ATGCTCACTTCACTAGGAGCCCCCCACTCCCGGGAGAGGCCCGTCGCCTG
CCGTTCCAGGACAGTTCGACGGCGTTGCCGAGGGTGGCCGTCGTGAGGGG
AGATTTGGCCCACAGGAGAAGATCGGTGTTGGTGCTGGTCTTGGTGCGGG
GACGGAGAGCGGGATGAACTTTGCGGAGCGGATGATGGCTAAGATGGGAC
ACACGCAGGGGCAAGGTGGGCAAGAAGGGGGGGGGGGGCGAGGGAAAAAG
GGAATGGGAATGGACGGGAGTGAAGGGACGTGAGTAACGAGGAGGTCGGT
AGCCTCGACTGCTACTACTGCTGCTATTGGCGTTGTTACCAACCCCTCAC
AAGAGTTGGGGGCTGGCGGAGACATGGCATTCACGGAGAGGGAAACCAAT
GGCTGCGTCGATGGCGTGTTGCTCTTCTGAGCGCATGCTGCTTTATTTTT
TGCATGACATGGCATGGCCCCTAGTTCGCCGTCTGTTGTTGTTGTTGTCG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGACGGCGCCTCC
TTGAAGGCCCGTACTCGCAGCAGTGTAGGCTGGGGAGGATGGACCAACCA
GTACCTTGGTTGGCACGTGTCGCACCTAATCACCCGTACATTTAAAATGC
TGAACGTCGTGGCGTTGTTTGTACACCGACCGAACGCATGACCTGCTGAC
GACTGCATGACCTTGCCTTCGTTAACGCAGGCTTGGGAGCCTCGAAGCAG
GGAATCAGCCAACCGCTGCAGTCTATGGCGGCAGGCGGCGGGATGGGGGT
GATCGACATGCATCAGGCCGACAAAAAGAGGTGGGTTGCCTGCACCACAC
CACGCCACACCGCACCGTAGCCACAAGATGAGGGAGAGGGAGGGGGCGTG
CGAACGGCAGGCTAGACTACCACAGAACTCCGTCGAGCGTTGGAGCTGTA
ACGCGTGCTTGACCAGCTCCACCACTTGACTTGTACTCCGCATGTATTTT
TCCCTGAAGTTGTCCGAAGCGGAAGAGTGTGGCTGTTTTTGGTGTTCCCC
CCACCTTTCCTTTCTTTGTTTGAAAATCCACCTTGCTTTTTTGCGGCTGT
TGCTGTTGATCAAGGCTGATTTTCTAGTTGGAATGTAACCGCTTGCGTTG
GGCCTTACAGCAGCCAGTGCCTTCGGGGCCAACACCAACTTCTTTCGTTT
GTCTGCGCCGTTTTCAGGATTTTTGTCGTAGTGAGTGGTCCCGCTTATCA
GACCAAGCGCGCAGGCGATACTGTATGGTAGTGCTCTTTTGCTTTTGGCC
CAGGAATCTCCGAAGATGAGCGCCTTTTTGATGTTTGATGTCTACACTGG
TGTGGACTTGTCCCCATTGACCATAGGCTATGCGGCGTTTCAGTGGTTTT
GCGAGCATTAACGTTGCTTCGGATGCCGTTGCCCCGTACCCTTCTCAATT
CTGTCCCTATTTTCTATTTTCCTTGCTGCACACCCCATCACACCGCACTG
CACCGCACGACATGTGGTACTGCTGCAGGATGGGAGGCCCGTCGGACACA
CCAGCGCCGCCGGCGGCACGAAAAAAGCGGGGTCTGTTCTCCAACCCCAC
ACGAGTGTTGCTCCTCAAGGTGACGCCTGGTGAAGTACAAGTATTGAAGC
AAGTGGGGATGACTCCTTAGATTGGCCAGCTGTCTCGAAACCGACGGAGC
AGACGAGGTGGTTGTGTCGTCCTGTTTTGCTCGTGTTTTTTTTTTGTGTG
TGTGTATCCGAGTTCTTGCAGGTGTGTTGCGTTCCTACGTGGCCTTTTTG
CTGATTCTTAACTCATTCTTCCGTGTTCTTCTTGTGTTCTCGTGCAGTAG
ACTTGGGGCTTGGCTCCGAAAAGCACCAGCCAGTTTTTCATGTGCGACAG
CAGACTGCCACTTTTTATGGAGATTCCGCGATACGCGTGCGCGCTAAGGT
TATTTCTCTTTCTCCTGCTCCTTTCCCTTCCTCCTCCCCACCTCCTAGTA
ACCCTTCCCCCCGTCCTCTTCCATTTGCCCTCCTCTGACTTCTCTCCCTG
TCTCTCTCTCTCTCTCTCTCTCTGCTTCCGCTTTCTCCCTCTGTCTCTCC
CTTGCCCGCGTATCGTGTCTCCCTTACTCTCACTGGGGACGGATGGGCGT
GCGATCGATCGGTTGTGTGTGACGCATCCATTCTATATGGTGGGTGGCAG
AATATGGTGGGGCCGGGGGAGGTGGATGACGAGCTGGAAAGCGAGACGTC
CGGGGAGTGCGAGCGGTTTGGTCCCGTGAGGCGGTGTCTCATCTACGAGA
TCAAGGCAAGGGCATCCCGACCCCGCCTCATGAGCTTGCTGTTATGTCGT
GTTCATGGCGTGCCGAGAAAGCAGGCCCTGGAGATCCTGTCGGTTTCTCG
CCCTGTTTGTTTTTTGCAAGCAGGGAACCCCTCCGCATAAGCGATGCGGT
TAGATGTAAAACAGGTTGTGAGCGCGCCGTACCCATGGAATGATGTTTTT
TTCTAGCAGCAACAAAAAAAACAAACACAACAAGCATGGCCTCTAGGCTA
CGCGAAGACTTTTTTAGGCTTGCCAAGGGTGTGTGGATAGTGACAACTCC
TCGGGCCGAGGGCGCTGTCTCTGGTAGGCGTAGGCCTGGATCACGGAATT
CACGTGAGCCGCGGTCGGTGAAGGTCAAACCAGATATAACCTATGTGCGA
AAGACGGCGATGCTATTTCTCCAGAGTCGGACTGCTACCTTGTTGAAGTA
TTCAGTTCCCTAGACGATTTATTGCCTACCGTTGTTGTAACCCATTAGTG
CATGTTGTGGGTCCCGTTGCCCGAGACCTAACCCCCAGAGTGCAGCACGA
GGTTATCAGCTGCGTCGTTGGTACATGTAAAGCTGTGATCTCGATCTACC
CCCATGTTTTGCCGCACCGCACCCACTCCTGTTTGATTTGGCTACGACGC
CTTGTTGTTTCTCCCCGCTGCCATGATTTCCCGATGGGATGGGCTTTCTT
AGGGAGGGGACACGCCGGACACACAGAGGGTTAGGATCTTCGTGGCGTTC
GAAAAGCAAGAGAGCGCCGTAAAAGGTTAGTATCGTTGGGGAAAGATAAT
TTCCTGCCTATACCCCGTGCCTGCTTCAGCACGCCGCACGCGTTCCTCTA
TGTTTCTGCGATGCTTTCCCAACCCACATCCCTGCTGGCACGCGTCCACA
ACGCTCTGTATTTGTTGAACGTGCCCGTCAATGCTTTTGCAACGACAGCA
GCAGGAGCCGATGTTGGCCTTCTGCGTTTTTGCTGTGTCATAGTAAAGTA
TATACTTCGAAGTACTTCGTTTATGTTGTATTGTTATACCGCTGTTTTCA
TGTTTTCTCGCGCTCAGCAGTATTGAACACCCTCTTCGTCGCGTAGCAGG
CGAGCCGGCGAAGTGTGTCCTTGGCTCAACTCATTCTGCCGATAGCGCCG
CTTAGCCTCGTTGCGTGCGAATAACTTGTTGCGGTATCTTCGGCCGCACG
ATGCCAACAGGGTTTGCCTGCGTTTGACTTGTCTTGTTTCTCCGCAGCGA
ACGAATCATGTGAAAAAAGTAGCTCTCTGCATGAGGTTTACCCCCCTACG
TTGTCGTTGTTTTTTGTCTGTTTCGCAGAGAATTTGTGTATTTTTATCTC
AATCGATCTCTCTTTCCCGATATGTTTTGATCTGTTGCTATCCTGTCGGT
GGTCTCTTCCGGCTGGTGGCCCAACACGACGAACTGGACGATTGACGATG
CACAGCCTACCTCGAGATGAACGGCCGTTTTTTCGGAGGGCGACAGATCG
CGGCCTCGTTCTACAAGGAGGACAAGTTCGACGCGTTAGATCTAGAGCCA
CAGCCTGATGAGGAGAAGTAGCACCTTTGCTGTCATCGATCGGTATTGCT
TGTAGAGTTCGTAGATGTTAACAAATGGCACTGCTGGATGGAGATGAAGG
TAGAAAATCGACGACTTGTTTTATCGGAGATATAGCCGACGCTGCCGCAG
GTGATAATATTTCTAGTGCTGTCTCGCACGTAAGGTAATCTTTTGGGCGC
AGAATATGAAAGTAGTGGCTTGTGTGTCTCCTATCCCATCGAAGGATGAA
ACCGAGGGAGCAATGCGGGATAGGGGGTCCTGGGGGAAGGTTTCCATCAA
ATCTCCGGAGATTTTGATGTGCTCGTGTCTGTGTGAAGAAACCGGAAGTC
GAGAAGCGGTTTCACGTTGACATGCTGGCCTTGGTGTGATTGCCGCTGCG
AAAGAGGTGCGCCGCAGAATTTAAACCTAGCGAAACGGCGAACGCTCTGA
AGAGTTCCTCAGCACCCCCTCGCTTGTTGCGGCCTGCGGAGAAGAAGCAC
GAGGTGTTCTTTGCTACATAGTCTAGCGGCGGAGTTTGTCTCGTGTAGTA
TATGGAGCGGAGTTCCGGGGGGAATGCACCGTAAGCATCGGGGTCTGAGC
ACACCCCCTGGACCGACTTTCAAAGCACTTCGATTACTTCGCAACAAGAA
GAGTGTAGGTGCCGAAAAGGGTGGGTGGCGTTGGAAAGATCTCGTCGAGA
CCTGTCCGAAAACTTGTCGTTTGGTATTGGCACCCTCTTCGATAAGGGCT
AGTCGAGCTTTGAAGTCGGTCCAGGAGGTGTGCTCAGACCCCGATTCTTA
CGGTACCAGCTGGACAGCGGGGAATTGATTTCGGTGAGATGGTCTATGCA
GCAACATGCGATTTTCCCGGCATTGCGACTGCTTTCCGATGTTGTCGGCG
TCAAAAGAGTTCGCTCAATAGCGGAGTACGAACGTGACTTCGAGCACCGA
CCCCAACTTACATTCCCAATCCCACCCGAAAGGCAATGCTTACGTGGCGA
GCAACACCTATGAATGGATGTTGTATGTACTTCGAAGTATGTCTGTTTTA
TGGAGTCAACCGCCAACCGTAGTTTACTCCATCAAGAACAGCGATGGCGT
CCACACCGTTTGGTTGCTCGTCACGTAAGCACGGGTTCGTTCTCGCGTAC
TGTATGCGGTTGGAGTGTTGAAACTTTTTTTTTTGTCGCTATTGCAACCG
GAAGCACCACGGGGAGAGGGAGAGGGGA
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Coding sequence (CDS) from alignment at C-linearis_contig111:42829..51156-

>mRNA_C-linearis_contig111.1480.1 ID=mRNA_C-linearis_contig111.1480.1|Name=mRNA_C-linearis_contig111.1480.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2982bp|location=Sequence derived from alignment at C-linearis_contig111:42829..51156- (Chordaria linearis ClinC8C monoicous)
ATGGACATATACGCGGACCTTCCGTCCGCCAAGCCTGCCTCGGACGCGAC
CGCCTCATCATCAGCCAAGGCCTCTACTCCCGCGTCCGCTTCCAAGGGAT
CATGGGCCCACTCCAAGTTTCAGGGGATGATTGCCAACAGAAGGACGGTC
AAGGCGATGGACATATACGCGGACCTTCCGTCCGCCAAGCCTGCCTCGGA
CGCGACCGCCTCATCATCAGCCAAGGCCTCTACTCCCGCGTCCGCTTCCA
AGGGATCATGGGCCCACTCCAAGTTTCAGGGGATGATTGCCAACAGAAGG
ACGGTCAAGGCGGCGACATCGAGGATGGCGCCCCCGACGTTGAAGCGACC
GGGCCCCCTAACCCCCGGCGCTCGGGCTACTAAGGCCAAGACCAAGGCGG
AGGGCTCTACTCCCACGAACCCAAAGGCGACATCGAGGATGGCGCCCCCG
ACGTTGAAGCGACCGGGCCCCCTAACCCCCGGCGCTCGGGCTACTAAGGC
CAAGACCAAGGCGGAGGGCTCTACTCCCACGAACCCAAAGGGAGCGCCGT
CGCCGCCTGCCAGTCGGCCGCAGACATGGGACATGGGCTTTGGGGACGTG
GACGATGATTATGATCCCGCCAACCCCAACGACTACATGGACTACTGCAA
AGAGAGGATCAACAAGAAGAAGCAGGAGGAGCGGGATAGGGAGCTCAAGA
TCATCATGGAGGAGCAGGAGCGGGAGGGAGCGCCGTCGCCGCCTGCCAGT
CGGCCGCAGACATGGGACATGGGCTTTGGGGACGTGGACGATGATTATGA
TCCCGCCAACCCCAACGACTACATGGACTACTGCAAAGAGAGGATCAACA
AGAAGAAGCAGGAGGAGCGGGATAGGGAGCTCAAGATCATCATGGAGGAG
CAGGAGCGGGAGCGAAAACGGCAAGATGAAGAGCGAGCAGCAACGATCCG
CAAGATCCAAGAGGCGGCGGCAAAGTCCCACGAGGGTGCTGCAGCGGCAG
CAGCGGGGGCGGTGCAGGGCGGCGCCGGACTCGGGCTCGGACTTGGAGCC
GGCGCAGCAGGCGTCAGCAGCGCGGGACGCGGGCGAGGGGGGCCCGTGGG
GGACATGGCGGCCCTGGAGGCGACGATGGGGCGCGGGCGAGGTCGCGGGC
TGTCGAACCTCCCGGCGTGGATGACGAAGGGCAAGGGGACGGGGCCGGGA
TCTAAGGAGAGCTTACCGCGAAAACGGCAAGATGAAGAGCGAGCAGCAAC
GATCCGCAAGATCCAAGAGGCGGCGGCAAAGTCCCACGAGGGTGCTGCAG
CGGCAGCAGCGGGGGCGGTGCAGGGCGGCGCCGGACTCGGGCTCGGACTT
GGAGCCGGCGCAGCAGGCGTCAGCAGCGCGGGACGCGGGCGAGGGGGGCC
CGTGGGGGACATGGCGGCCCTGGAGGCGACGATGGGGCGCGGGCGAGGTC
GCGGGCTGTCGAACCTCCCGGCGTGGATGACGAAGGGCAAGGGGACGGGG
CCGGGATCTAAGGAGAGCTTACCGGAGCCCCCCACTCCCGGGAGAGGCCC
GTCGCCTGCCGTTCCAGGACAGTTCGACGGCGTTGCCGAGGGTGGCCGTC
GTGAGGGGAGATTTGGCCCACAGGAGAAGATCGGTGTTGGTGCTGGTCTT
GGTGCGGGGACGGAGAGCGGGATGAACTTTGCGGAGCGGATGATGGCTAA
GATGGGACACACGCAGGGGCAAGGAGCCCCCCACTCCCGGGAGAGGCCCG
TCGCCTGCCGTTCCAGGACAGTTCGACGGCGTTGCCGAGGGTGGCCGTCG
TGAGGGGAGATTTGGCCCACAGGAGAAGATCGGTGTTGGTGCTGGTCTTG
GTGCGGGGACGGAGAGCGGGATGAACTTTGCGGAGCGGATGATGGCTAAG
ATGGGACACACGCAGGGGCAAGGCTTGGGAGCCTCGAAGCAGGGAATCAG
CCAACCGCTGCAGTCTATGGCGGCAGGCGGCGGGATGGGGGTGATCGACA
TGCATCAGGCCGACAAAAAGAGGCTTGGGAGCCTCGAAGCAGGGAATCAG
CCAACCGCTGCAGTCTATGGCGGCAGGCGGCGGGATGGGGGTGATCGACA
TGCATCAGGCCGACAAAAAGAGGATGGGAGGCCCGTCGGACACACCAGCG
CCGCCGGCGGCACGAAAAAAGCGGGGTCTGTTCTCCAACCCCACACGAGT
GTTGCTCCTCAAGGATGGGAGGCCCGTCGGACACACCAGCGCCGCCGGCG
GCACGAAAAAAGCGGGGTCTGTTCTCCAACCCCACACGAGTGTTGCTCCT
CAAGAATATGGTGGGGCCGGGGGAGGTGGATGACGAGCTGGAAAGCGAGA
CGTCCGGGGAGTGCGAGCGGTTTGGTCCCGTGAGGCGGTGTCTCATCTAC
GAGATCAAGGCAAGGGCATCCCGACCCCGCCTCATGAGCTTGCTGTTATG
TCGTAATATGGTGGGGCCGGGGGAGGTGGATGACGAGCTGGAAAGCGAGA
CGTCCGGGGAGTGCGAGCGGTTTGGTCCCGTGAGGCGGTGTCTCATCTAC
GAGATCAAGGCAAGGGCATCCCGACCCCGCCTCATGAGCTTGCTGTTATG
TCGTGGAGGGGACACGCCGGACACACAGAGGGTTAGGATCTTCGTGGCGT
TCGAAAAGCAAGAGAGCGCCGTAAAAGGGAGGGGACACGCCGGACACACA
GAGGGTTAGGATCTTCGTGGCGTTCGAAAAGCAAGAGAGCGCCGTAAAAG
CCTACCTCGAGATGAACGGCCGTTTTTTCGGAGGGCGACAGATCGCGGCC
TCGTTCTACAAGGAGGACAAGTTCGACGCGTTAGATCTAGAGCCACAGCC
TGATGAGGAGAAGTAGCCTACCTCGAGATGAACGGCCGTTTTTTCGGAGG
GCGACAGATCGCGGCCTCGTTCTACAAGGAGGACAAGTTCGACGCGTTAG
ATCTAGAGCCACAGCCTGATGAGGAGAAGTAG
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