prot_C-linearis_contig111.1480.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig111.1480.1
Unique Nameprot_C-linearis_contig111.1480.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length497
Homology
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A6H5KK36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK36_9PHAE)

HSP 1 Score: 570 bits (1468), Expect = 1.250e-198
Identity = 389/501 (77.64%), Postives = 411/501 (82.04%), Query Frame = 0
Query:    1 MDIYADLPSAKPASD-ATASSSAKASTPASASKGSWAHSKFQGMIANRRTVKAATSRMAPPTLKRPGPL-TPGARATKAKTKAEGSTPTNPKGAPSPPASRPQTWDMGFGDVDDDYDPANPNDYMDYCKERINKKKQEEXXXXXXXXXXXXXXXXXXXXXXRAATIRKIQEAAAKSHE-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVGDMAALEATMGRXXXRGLSNLPAWMTKGKGTGPGSKESLPEPPTPGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGT--ESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEEK 496
            MDIYADLPSAKP+++ A AS          ASKGSWAHSKFQGMIANRRT KAATSRMAPPTLKRPG     GAR  K  +KAE S     K   SP A+RPQ+WDMGFGDVDDDYDPA PNDYM+YC+ERI+KKKQEE  XXXXXXXXXXXXXXXXXXXXRAATI+KIQEAAAKSHE G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    D+AA++     XXX  LSNLPAW+TKGKG  PGS E L EPPTP R P P VPGQ D V E G+R GRFGPQ K G GAG+G G+  ESGMNFAERMMAKMGH +GQGLGAS+QGISQPLQSM+AGGGMGVIDMH +DKKRMGGPSDTPAP AARKKRGLFSNPTRVLLLKNMVGPGEVDDELE ETSGECERFGPVRRCLIYEIK               GGDTPDT+RVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQ DEEK
Sbjct:    1 MDIYADLPSAKPSANVAVASPXXXXXXXXXASKGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGXXXAAGARPNKTISKAESSXXXXXKETTSPAATRPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERDXXXXXXXXXXXXXXXXXXXXRAATIKKIQEAAAKSHEVGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXXLSNLPAWVTKGKGATPGSPEML-EPPTPARRPPP-VPGQLDAVPEAGQRGGRFGPQAKAG-GAGIGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAP-AARKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK---------------GGDTPDTERVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQADEEK 482          
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: D7FL75_ECTSI (DNA-damage repair protein drt111, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL75_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 1.170e-161
Identity = 338/479 (70.56%), Postives = 364/479 (75.99%), Query Frame = 0
Query:    1 MDIYADLPSAKPASDATASSSAKASTPAS-ASKGSWAHSKFQGMIANRRTVKAATSRMAPPTLKRPGPLTP-GARATKAKTKAEGSTPTNPKGAPSPPASRPQTWDMGFGDVDDDYDPANPNDYMDYCKERINKKKQEEXXXXXXXXXXXXXXXXXXXXXXRAATIRKIQEAAAKSHE-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVGDMAALEATMGRXXXRGLSNLPAWMTKGKGTGPGSKESLPEPPTPGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGT--ESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIA 474
            MDIYADLPSAKP++D   +S+A      S ASKGSWAHSKFQGMIANRRT KAATSRMAPPTLKRPGP +  GAR +K                PSP ASRPQ+WDMGFGDVDDDYDPA PNDYM+YC+ERI+KKKQEE        XXXXXXXXXXXX  RAATI+KIQEAAAKSHE G  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    D+AA++     XXX GLSNLPAW+TKGKG  PGS               P +P   D V E G+R GRFGPQ K G GAG+G G+  ESGMNFAERMMAKMGH +GQGLGAS+QGISQPLQSM+AGGGMGVIDMH +DKKRMGGPSDTPA PA RKKRGLFSNPTRVLLLKNMVGPGEVDDELE ETSGECERFGPVRRCLIYEIK               GGDTPDT+RVRIFVAFEKQESAVK  L+  GR  GG+  A
Sbjct:    1 MDIYADLPSAKPSADVAVASAAXXXXXXSPASKGSWAHSKFQGMIANRRTAKAATSRMAPPTLKRPGPPSAAGARPSKXXXXXXXXXXXXXXETPSPAASRPQSWDMGFGDVDDDYDPARPNDYMEYCRERIDKKKQEERDRELKIIXXXXXXXXXXXXEERAATIKKIQEAAAKSHEVGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAAMDXXXXXXXXXGLSNLPAWVTKGKGGTPGS---------------PEMP--LDAVPEAGQRGGRFGPQAKAG-GAGVGGGSAAESGMNFAERMMAKMGHKEGQGLGASRQGISQPLQSMSAGGGMGVIDMHHSDKKRMGGPSDTPAAPA-RKKRGLFSNPTRVLLLKNMVGPGEVDDELEGETSGECERFGPVRRCLIYEIK---------------GGDTPDTERVRIFVAFEKQESAVKGLLDELGR--GGKMGA 443          
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A6U3SBK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SBK6_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.790e-50
Identity = 103/197 (52.28%), Postives = 123/197 (62.44%), Query Frame = 0
Query:  301 ESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAP-PAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEEK 496
            + G N A  MM  MG T G+GLG   QGIS+PL++   GGG G +    A   +    S  P P PAA+KKR LF NPT VLLLKNMVGPGEVD ELE E   EC +FGPVR C++YE+K                G  PD Q VR FVAFEKQESA+KA+L+M GRFF GRQI  +F+ E +F   DL PQ D+E+
Sbjct:   25 KGGGNLAMNMMKGMGWTDGEGLGREGQGISRPLEARPTGGGQGAVANPGARGNQKLSTSMLPPPGPAAKKKRALFRNPTTVLLLKNMVGPGEVDSELEKEVQEECSKFGPVRTCVVYELK----------------GAPPD-QAVRTFVAFEKQESAIKAFLDMEGRFFAGRQIRCAFFNETRFRNRDLVPQGDDEE 204          
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A835ZCV1_9STRA (Putative DNA-damage repair protein drt111 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCV1_9STRA)

HSP 1 Score: 179 bits (455), Expect = 9.810e-48
Identity = 152/397 (38.29%), Postives = 182/397 (45.84%), Query Frame = 0
Query:  104 DMGFGDVD--DDYDPANPNDYMDYCKERINKKKQEEXXXXXXXXXXXXXXXXXXXXXXRAATIRKIQEAAAKSHEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVGDMAALEATMGRXXXRGLSNLPAWMTKGKGTGPGSKESLPEPPTPGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARK--------KRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEP 490
            + GF D D  D YDPA PNDYM YCK RI  K+QEE                      R   ++ I E        XXXXXXXXXXXX                       P    A      GR   RG+ NLPAW+TK +  G               G                                     +  GM  A+ +MAKMG  +G+GLG S QGISQP+ + + G GMG + MH AD+KR       PA  A           KRGLFSNPT VLLLKNMVG GEVD +LE E   EC ++GPVR+CL+ E                     P  + V  FVAFE+QESA+KAYL+MNGRFFGGRQI A+FY+E KF+  +  P
Sbjct:   82 ESGFNDRDVPDPYDPARPNDYMAYCKYRIETKRQEE----------------------RERELKAIMEEQRXXXXXXXXXXXXXXXXXLPPQLQAKLGAAPLLPPMAGLAPP----AVPGPPAGRGRGRGMVNLPAWLTKMQQEG---------------GKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGGMALAQSLMAKMGWQEGKGLGKSGQGISQPIVAQSTGVGMGTVAMHPADRKR-------PAQAAXXXXXXXXXSAKRGLFSNPTCVLLLKNMVGAGEVDSDLEGEVKEECMKYGPVRQCLVRE-----------------HAGLPADETVWTFVAFERQESAIKAYLDMNGRFFGGRQIGAAFYEEAKFERGEYGP 413          
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: W7TGN1_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGN1_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.230e-45
Identity = 89/185 (48.11%), Postives = 117/185 (63.24%), Query Frame = 0
Query:  311 MAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVID-MHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 494
            M K+G+ +G GLG  +QGI++ +++ A GGG GVI    Q  K                 KRGLFSNPT+++LLKNMVGPGEVDD+L+ ET+ EC + GPV  CL++E+   +                P+ +RVR FVAFE+QESAVKAY+ MNGRFFGGRQ+ ASF+ E+KF   DL P  +E
Sbjct:    1 MKKLGYQEGAGLGRDRQGITEAIKARALGGGKGVISGPAQGGKGAQDVDRQQXXXXXXXXKRGLFSNPTKIVLLKNMVGPGEVDDDLQGETAEECAKHGPVSECLVFEVNDNSY---------------PEEERVRTFVAFERQESAVKAYVAMNGRFFGGRQVQASFFDEEKFARKDLAPGKEE 170          
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A7S2W0J2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0J2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.290e-37
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 0
Query:  357 GPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEE 495
            GP   P     +KKR LF NP+ VLLLKNMVGPGEVD++L++E + EC +FGPVR+C++YE KA                  P+ + VR FVAFEKQESA+KA+L+M GRFF GRQI  +F+KED+F + D  P P+EE
Sbjct:   60 GPGMVPPQGPPKKKRALFRNPSSVLLLKNMVGPGEVDEDLQNEVAEECSKFGPVRQCVVYEHKAPG---------------VPEHEAVRTFVAFEKQESAIKAFLDMEGRFFAGRQIHCAFFKEDRFKSGDFAPSPEEE 183          
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: G7JHL2_MEDTR (DNA-damage-repair/toleration protein DRT111 n=6 Tax=IRL clade TaxID=2233839 RepID=G7JHL2_MEDTR)

HSP 1 Score: 151 bits (382), Expect = 1.580e-37
Identity = 99/231 (42.86%), Postives = 126/231 (54.55%), Query Frame = 0
Query:  264 SPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 494
            SP+ PG  DG +         G  E +G+G G G      M  A+RMMAKMG  QGQGLG  +QGI+ PL +       GVI ++ +D K     SD        K   +   PTRVLLL+NMVGPGEVDDELE E   EC ++G V R LI+EI    + P             P  + VRIFV FE+ E   KA ++++GR+FGGR + A+FY EDKF   +L P P E
Sbjct:  193 SPSPPGSVDGFS--------IGKSETVGLGVGAGGQ----MTAAQRMMAKMGWKQGQGLGKQEQGITTPLMAKKTDRRAGVI-VNASDSK-----SDKKV-----KSVNINGVPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEI----TEPNF-----------PTDEAVRIFVQFERSEETTKALVDLDGRYFGGRTVRATFYDEDKFSKNELAPMPGE 385          
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A7J9F154_9ROSI (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9F154_9ROSI)

HSP 1 Score: 147 bits (372), Expect = 1.980e-37
Identity = 98/234 (41.88%), Postives = 123/234 (52.56%), Query Frame = 0
Query:  261 RGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 494
            R PSP  PG+ +G           G  E  G+G G G G    M  A+RMMAKMG  +GQGLG  +QGI+ PL +       GVI             S+T  P    K       PTRVLLL+NMVGPGEVDDELE E   EC ++G V R LI+EI    + P             P  + VRIF+ FE+ E   KA ++++GRFFGGR + ASFY E++F   +L P P E
Sbjct:   59 RSPSPP-PGKAEGFT--------IGKSETSGLGVGAGGGQ---MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVIV----------NASETSKPDKKVKSVSFNGPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLIFEI----TEPNF-----------PADEAVRIFIQFERSEETTKALIDLDGRFFGGRIVKASFYDEERFSKNELAPMPGE 255          
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A1Q3BH05_CEPFO (G-patch domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BH05_CEPFO)

HSP 1 Score: 148 bits (374), Expect = 1.740e-36
Identity = 99/238 (41.60%), Postives = 131/238 (55.04%), Query Frame = 0
Query:  259 PGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSN--PTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 494
            PG  PSP   G  DG           G  E  G+G G G      M  A+RMMAKMG  +GQGLG  +QGI+ PL +       GVI ++ +D K     SD       +K +G+  N  PTR+LLL+NMVGPGEVDDELE E + EC ++G V R LI+EI    + P             P  + VRIF+ FE+ E   KAY++++GR+FGGR + A+FY E++F   +L P P E
Sbjct:  170 PGYPPSPPTQGNADGXXXXXXXXFVIGKSETSGLGVGAGGQ----MTAAQRMMAKMGWKEGQGLGKQEQGITTPLVAKKTDRRAGVI-VNASDNK-----SD-------KKVKGVSFNGPPTRILLLRNMVGPGEVDDELEDEVASECAKYGMVTRVLIFEI----TEPNF-----------PTDEAVRIFIQFERSEETTKAYIDLDGRYFGGRVVHAAFYSEERFSNNELAPLPGE 375          
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Match: A0A2I4GVE1_JUGRE (DNA-damage-repair/toleration protein DRT111, chloroplastic n=4 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GVE1_JUGRE)

HSP 1 Score: 148 bits (374), Expect = 2.000e-36
Identity = 97/231 (41.99%), Postives = 128/231 (55.41%), Query Frame = 0
Query:  264 SPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGTESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQADKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESETSGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAFEKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDE 494
            SP+ P   DG           G  E +G+G G G      M  A+RMMAKMG  +GQGLG  +QGI+ PL +       GVI ++ ++ K+     D  A     K   +   PTRVLLL+NMVGPGEVDDELE E + EC ++G V R LI+EI    + P             P  + VRIFV FE+ E   KA ++++GRFFGGR + ASFY+E++FD  +L P P E
Sbjct:  190 SPSPPSNGDGFT--------IGKSETVGLGVGAGGQ----MTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRRAGVI-VNASETKQ-----DKKA-----KSVNINGPPTRVLLLRNMVGPGEVDDELEEEVASECAKYGTVTRVLIFEI----TEPNF-----------PPNEAVRIFVQFERPEETTKALVDLDGRFFGGRVVRASFYEEERFDKNELAPMPGE 382          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK36_9PHAE1.250e-19877.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL75_ECTSI1.170e-16170.56DNA-damage repair protein drt111, putative n=1 Tax... [more]
A0A6U3SBK6_9STRA1.790e-5052.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835ZCV1_9STRA9.810e-4838.29Putative DNA-damage repair protein drt111 n=1 Tax=... [more]
W7TGN1_9STRA3.230e-4548.11RNA binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A7S2W0J2_9STRA1.290e-3752.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
G7JHL2_MEDTR1.580e-3742.86DNA-damage-repair/toleration protein DRT111 n=6 Ta... [more]
A0A7J9F154_9ROSI1.980e-3741.88Uncharacterized protein n=2 Tax=Gossypium TaxID=36... [more]
A0A1Q3BH05_CEPFO1.740e-3641.60G-patch domain-containing protein n=1 Tax=Cephalot... [more]
A0A2I4GVE1_JUGRE2.000e-3641.99DNA-damage-repair/toleration protein DRT111, chlor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..166
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 380..476
e-value: 1.5E-11
score: 54.4
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 301..345
e-value: 7.2E-4
score: 28.8
IPR000467G-patch domainPFAMPF01585G-patchcoord: 304..335
e-value: 1.6E-7
score: 31.1
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 303..360
score: 11.057
IPR040052Splicing factor 45PIRSFPIRSF031066SPF45coord: 1..182
e-value: 7.2E-5
score: 20.2
coord: 287..495
e-value: 1.3E-57
score: 193.9
IPR040052Splicing factor 45PANTHERPTHR13288SPLICING FACTOR 45 SPF45coord: 1..490
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 378..479
e-value: 4.8E-24
score: 86.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 379..480
score: 8.996
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 386..483

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:44036..51061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1480.1mRNA_C-linearis_contig111.1480.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig111 42829..51156 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig111.1480.1 ID=prot_C-linearis_contig111.1480.1|Name=mRNA_C-linearis_contig111.1480.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=497bp
MDIYADLPSAKPASDATASSSAKASTPASASKGSWAHSKFQGMIANRRTV
KAATSRMAPPTLKRPGPLTPGARATKAKTKAEGSTPTNPKGAPSPPASRP
QTWDMGFGDVDDDYDPANPNDYMDYCKERINKKKQEERDRELKIIMEEQE
RERKRQDEERAATIRKIQEAAAKSHEGAAAAAAGAVQGGAGLGLGLGAGA
AGVSSAGRGRGGPVGDMAALEATMGRGRGRGLSNLPAWMTKGKGTGPGSK
ESLPEPPTPGRGPSPAVPGQFDGVAEGGRREGRFGPQEKIGVGAGLGAGT
ESGMNFAERMMAKMGHTQGQGLGASKQGISQPLQSMAAGGGMGVIDMHQA
DKKRMGGPSDTPAPPAARKKRGLFSNPTRVLLLKNMVGPGEVDDELESET
SGECERFGPVRRCLIYEIKARASRPRLMSLLLCRGGDTPDTQRVRIFVAF
EKQESAVKAYLEMNGRFFGGRQIAASFYKEDKFDALDLEPQPDEEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003954RRM_dom_euk
IPR000467G_patch_dom
IPR040052RBM17
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR035979RBD_domain_sf