prot_C-linearis_contig7.14617.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14617.1
Unique Nameprot_C-linearis_contig7.14617.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length202
Homology
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BLAST of mRNA_C-linearis_contig7.14617.1 vs. uniprot
Match: D7G200_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G200_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 1.420e-50
Identity = 96/133 (72.18%), Postives = 105/133 (78.95%), Query Frame = 0 
Query:    2 GGVVVATCADDKTIRFFRVDGATFLGKLDVSGVCTTGRIRDMCYVEAANDGGXXXVDXX----GSEGSLVTVTSAGGVHVWGVPALEGVGTEGAGAELKMPLLATHSLKGEPRFTCVTACLSGEISEPAPGKS 130
            G V VATCADDKTIRFFR +G T LGK+DVS VC TGRIRDMC+V A     XXX  XX       GSL TVTS GGVHVWGVP LEGVG EG+GAEL +PLL+THSLKGEPRFTCVTACL G+++EPAPGKS
Sbjct:  259 GAVAVATCADDKTIRFFRTEGGTLLGKVDVSDVCPTGRIRDMCHVGADAXXXXXXXXXXDRACSGGGSLATVTSTGGVHVWGVPTLEGVGAEGSGAELTVPLLSTHSLKGEPRFTCVTACLCGDVTEPAPGKS 391
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G200_ECTSI1.420e-5072.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3783514..3784979 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14617.1mRNA_C-linearis_contig7.14617.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3783513..3784979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14617.1 ID=prot_C-linearis_contig7.14617.1|Name=mRNA_C-linearis_contig7.14617.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=202bp
GGGVVVATCADDKTIRFFRVDGATFLGKLDVSGVCTTGRIRDMCYVEAAN
DGGGGGVDGGGSEGSLVTVTSAGGVHVWGVPALEGVGTEGAGAELKMPLL
ATHSLKGEPRFTCVTACLSGEISEPAPGKSKNSKKRKPRQQQQQQQQTAG
EGEGDRPEEGGQTDGNPGEGTSKSSKKKKKSKRKKAREVQLQSSVGDDAG
AG
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