mRNA_C-linearis_contig11.1220.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1220.1
Unique NamemRNA_C-linearis_contig11.1220.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig11.1220.1 vs. uniprot
Match: A0A6H5KW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW91_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 1.750e-122
Identity = 195/320 (60.94%), Postives = 226/320 (70.62%), Query Frame = 1 
Query:  319 TFSKAXXXXXXXXXXXXXXXSYSSYCQRPYAFTNESSMPCVEIPTGEDRLSGVGAFYDEEGCAPEQQSRSIVGCNLAGVASCRLCVFNRALFSQNILGGEEVPFVDCPCCVPDTYEMGGDISCDFLYSAAPVAVPLATPSPSETXXAGATMVPGATTAPLAAGERAVDIGTLVPSGAPETLAPTIPPIPMEPCEIGAGGDTTGNSTVCVDVASPLDIVNGIGTYYELGCAGLGCSIAGFSDCRQCIFDATAYAASGGMDALVECPCCVPVTYQLRPDDSECIWPATPAPTSLSGAARLGRSSLAISVVVAVAGVVGGMLK 1278
            TFSKA   XXXXXXXXXXX  Y S+C+RPY F NES + CVE+ T +DR +GVGAFYDE GCA  Q     VGC+L GV SCRLCVF+RAL+SQ IL GEEVPFVDCPCCVP+ Y +GGDI CDF+ SAAP+ VP ATPSP+       TMV G T++PL   E    + TL P             I MEPCE+G  GDTTG+ST+CVD+AS LD+ NGIGTYYE  C GLGC IAG  DCRQCIFD TAYAASGG DALVECPCCVPV YQLRPD SEC WPATP P ++ G+   G   +  + V +  G++GG+L 
Sbjct:  107 TFSKAPTPXXXXXXXXXXXFPYYSFCERPYPFANESDILCVEMATDQDRANGVGAFYDELGCAGAQSGTGFVGCSLGGVPSCRLCVFHRALYSQTILNGEEVPFVDCPCCVPEVYGVGGDIDCDFVTSAAPIPVPAATPSPTMAPQXXXTMVSGVTSSPLVEDEARGGVATLAPVMXXXXXXXXXXTIAMEPCEVGVAGDTTGDSTLCVDIASTLDLANGIGTYYEANCEGLGCDIAGNVDCRQCIFDETAYAASGGTDALVECPCCVPVIYQLRPDSSECTWPATPTPITVEGSG--GSRPVIPAAVASAVGIIGGLLS 424
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BLAST of mRNA_C-linearis_contig11.1220.1 vs. uniprot
Match: D8LN92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN92_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 1.060e-107
Identity = 167/279 (59.86%), Postives = 198/279 (70.97%), Query Frame = 1 
Query:  445 IPTGEDRLSGVGAFYDEEGCAPEQQSRSIVGCNLAGVASCRLCVFNRALFSQNILGGEEVPFVDCPCCVPDTYEMGGDISCDFLYSAAPVAVPLATPSPSETXXAGATMVPGATTAPLAAGERAVDIGTLVPSGAPETLAPTIPP-IPMEPCEIGAGGDTTGNSTVCVDVASPLDIVNGIGTYYELGCAGLGCSIAGFSDCRQCIFDATAYAASGGMDALVECPCCVPVTYQLRPDDSECIWPATPAPTSLSGAARLGRSSLAISVVVAVAGVVGGMLK 1278
            + T  DR +GVGAFYDE GCA  Q     VGC+L  V +CRLCVF+RAL+SQNIL GEEVPFVDCPCCVP+ YE+GGDI CDF+ SA P+ VP A       XX      PG T+AP A  E +V + TL    A  T APT  P I MEPCE+G  GDTTG+ST+CVD++SP+D+ NGIGTYYE  C GLGC IAG  DCRQCIFD TAYAASGG DALVECPCCVPV+YQLRPD SEC WPATP+P ++ G+   G   +  + V +  G++GG+L 
Sbjct:    1 MATDADRANGVGAFYDELGCAGAQSGTGFVGCSLGDVPNCRLCVFHRALYSQNILEGEEVPFVDCPCCVPEVYEVGGDIDCDFVASAPPIPVPAAXXXXXXXXXXXXXXXPGVTSAPPAEDEASVGVATLAXVMA-VTPAPTAAPVIAMEPCEVGVAGDTTGDSTLCVDISSPVDLANGIGTYYEANCEGLGCDIAGNEDCRQCIFDETAYAASGGTDALVECPCCVPVSYQLRPDSSECTWPATPSPINVEGSG--GSRPVIPAAVASAVGIIGGLLS 276
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BLAST of mRNA_C-linearis_contig11.1220.1 vs. uniprot
Match: D8LDL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL0_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 7.100e-101
Identity = 161/304 (52.96%), Postives = 199/304 (65.46%), Query Frame = 1 
Query:  394 CQRPYAFTNESSMPCVEIPTGEDRLSGVGAFYDEEGCAPEQQSRSIVGCNLAGVASCRLCVFNRALFSQNILGGEEVPFVDCPCCVPDTYEMGGDISCDFLYSAAPVAVPLATPSPSETXXAGATMVPGATTAPLAAGERAVDIGTLVPSGAPETLAPTIPPIPMEPCEIGAGGDTTGNSTVCVDVASPLDIVNGIGTYYELGCAGLGCSIAGFSDCRQCIFDATAYAASGGMDALVECPCCVPVTYQLRPDDSECIWPATPAPTSL----------SGAARLGRSSLAISVVVAVAGVVGGML 1275
            C+RPY ++NES +PCV++ T  D+ SG GAFYDEEGC P+ +S S+VGC   GV +CRLCVFNR LFS+ ILGGEEVPFVDCPCCVPDTYEMGGDI C+F YS+ PV+ P  TP   E                   G  +             TLAPTIP   MEPCE  AGG+++  + +CVD+AS +D  +GIGTYYE GC G+GC IAG  DCRQC+FD+ AYA SGG   L  CPCCVP+TY+LRP+ SEC+WP TP+PT+           +GAAR G +     VV+A   VVGG++
Sbjct:   39 CERPYTWSNESEIPCVDMVTAVDKASGAGAFYDEEGCGPDAESISVVGCAHGGVGNCRLCVFNRGLFSETILGGEEVPFVDCPCCVPDTYEMGGDIDCEFAYSSPPVSAP--TPVSVE-------------------GNASTPXXXXXEGDTNSTLAPTIP---MEPCETSAGGNSS--ALLCVDIASAVDWDDGIGTYYESGCQGVGCDIAGHVDCRQCVFDSEAYATSGGNLELAACPCCVPITYKLRPEGSECVWPPTPSPTAAPTTAEEWSERNGAARPGMAFGGPLVVIAA--VVGGLV 314
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KW91_9PHAE1.750e-12260.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN92_ECTSI1.060e-10759.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDL0_ECTSI7.100e-10152.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1167065..1173554 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-16_004120.1
Exons8
Model size1281
Cds size1281
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1220.1prot_C-linearis_contig11.1220.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 1167065..1173554 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927440.7313502-CDS-C-linearis_contig11:1167064..11672651622927440.7313502-CDS-C-linearis_contig11:1167064..1167265Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1167065..1167265 -
1690879701.8337398-CDS-C-linearis_contig11:1167064..11672651690879701.8337398-CDS-C-linearis_contig11:1167064..1167265Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1167065..1167265 -
1622927440.7438984-CDS-C-linearis_contig11:1167867..11679631622927440.7438984-CDS-C-linearis_contig11:1167867..1167963Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1167868..1167963 -
1690879701.8444824-CDS-C-linearis_contig11:1167867..11679631690879701.8444824-CDS-C-linearis_contig11:1167867..1167963Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1167868..1167963 -
1622927440.7537577-CDS-C-linearis_contig11:1168487..11685921622927440.7537577-CDS-C-linearis_contig11:1168487..1168592Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1168488..1168592 -
1690879701.8529022-CDS-C-linearis_contig11:1168487..11685921690879701.8529022-CDS-C-linearis_contig11:1168487..1168592Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1168488..1168592 -
1622927440.7669039-CDS-C-linearis_contig11:1168988..11692461622927440.7669039-CDS-C-linearis_contig11:1168988..1169246Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1168989..1169246 -
1690879701.8626325-CDS-C-linearis_contig11:1168988..11692461690879701.8626325-CDS-C-linearis_contig11:1168988..1169246Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1168989..1169246 -
1622927440.7792535-CDS-C-linearis_contig11:1169667..11697371622927440.7792535-CDS-C-linearis_contig11:1169667..1169737Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1169668..1169737 -
1690879701.8733592-CDS-C-linearis_contig11:1169667..11697371690879701.8733592-CDS-C-linearis_contig11:1169667..1169737Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1169668..1169737 -
1622927440.7916167-CDS-C-linearis_contig11:1171117..11712291622927440.7916167-CDS-C-linearis_contig11:1171117..1171229Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1171118..1171229 -
1690879701.8848088-CDS-C-linearis_contig11:1171117..11712291690879701.8848088-CDS-C-linearis_contig11:1171117..1171229Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1171118..1171229 -
1622927440.8077612-CDS-C-linearis_contig11:1172896..11731061622927440.8077612-CDS-C-linearis_contig11:1172896..1173106Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1172897..1173106 -
1690879701.8927534-CDS-C-linearis_contig11:1172896..11731061690879701.8927534-CDS-C-linearis_contig11:1172896..1173106Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1172897..1173106 -
1622927440.8195338-CDS-C-linearis_contig11:1173325..11735541622927440.8195338-CDS-C-linearis_contig11:1173325..1173554Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1173326..1173554 -
1690879701.9007566-CDS-C-linearis_contig11:1173325..11735541690879701.9007566-CDS-C-linearis_contig11:1173325..1173554Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 1173326..1173554 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1220.1

>prot_C-linearis_contig11.1220.1 ID=prot_C-linearis_contig11.1220.1|Name=mRNA_C-linearis_contig11.1220.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=427bp
MRQRHAFCGLLGLLLCVRGAVGQSNPAPVVQPQPTPGPTQAPTAEPTPAP
TPGPTEVPTPGPTNAPTIAPTPGPTQVPTLHPSPAPTLAPTPAPTQAPTL
HPTPGPTFSKAPTQAPTPAPTPPPTFSYSSYCQRPYAFTNESSMPCVEIP
TGEDRLSGVGAFYDEEGCAPEQQSRSIVGCNLAGVASCRLCVFNRALFSQ
NILGGEEVPFVDCPCCVPDTYEMGGDISCDFLYSAAPVAVPLATPSPSET
PAAGATMVPGATTAPLAAGERAVDIGTLVPSGAPETLAPTIPPIPMEPCE
IGAGGDTTGNSTVCVDVASPLDIVNGIGTYYELGCAGLGCSIAGFSDCRQ
CIFDATAYAASGGMDALVECPCCVPVTYQLRPDDSECIWPATPAPTSLSG
AARLGRSSLAISVVVAVAGVVGGMLK*
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mRNA from alignment at C-linearis_contig11:1167065..1173554-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1220.1 ID=mRNA_C-linearis_contig11.1220.1|Name=mRNA_C-linearis_contig11.1220.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6490bp|location=Sequence derived from alignment at C-linearis_contig11:1167065..1173554- (Chordaria linearis ClinC8C monoicous)
ATGCGGCAGCGACACGCATTCTGCGGCCTCCTGGGCCTCTTGCTGTGCGT
CCGCGGCGCGGTGGGGCAGAGCAATCCTGCCCCTGTTGTGCAACCGCAGC
CCACGCCTGGCCCAACCCAAGCTCCTACGGCCGAGCCTACCCCGGCCCCG
ACGCCCGGACCCACGGAAGTGCCTACCCCAGGGCCGACGAACGCGCCCAC
GATAGCCCCAACGCCGGGCCCTACACAAGGTGAAAGAAACAGCACCAGCG
CATTTAAAGTGTCTCGTCATACGTACTGTACGTAGAGAAGGATTGTTTTG
AACATGACACGATTTTTGAGCGTAGGCGTGTAGGGTTCCTCTGCATGTTC
GTTCCACCATAGGCCGCGCCGTGATGAGCTATGTTCTGGTTTTGCCTGAC
TAGTGCTCCGTGTTCGCCGCCGTTTTGTCTGCTCGCCGCCCCGTCCAGTG
CCCACGTTACATCCGTCCCCAGCGCCAACGTTGGCCCCGACACCGGCTCC
CACCCAGGCGCCAACCCTGCACCCCACCCCGGGCCCGACCTTCAGCAAGG
CTCCCACGCAGGCCCCCACACCGGCGCCAACGCCGCCGCCAACGTTCTCC
TACAGCAGCTACTGCCAGAGGCCGTACGCGTTCACGAACGAGAGCTCCAT
GCCTTGCGGTGAGGGAGAGAGGGCTGAATGAGAATATCAATCGGGTGAAC
AGCAGCAGTGTCTGAAATGTGCGTGGCTCAGGCGAAAGAATCGAATCTTT
CGTGTGTAACTCTGTTTGGCCTTGTGTGATAATAAGCTCCGGTGCCGAAC
CACCGTGAAGCCTTCGGCGAGTCTGATGGGTGTCCGTATCTGTGCTGGTT
CCTGTGTCGGAGAGGATCGAGGGGGGCTGCGCAAACATTCGTGTCGCGGA
GCTCTCTCGCGGTTTGAGTATCTAGTTTCGCCTCTTCTTGCTGCGTACGG
AACAACAACAACTTCCCCCCAAAATAAAAATGAAAAAGGCACTGCTGTAC
AACATACATTTTTTTTTCTTCCGTCCCATCACATCAATGGCCTAGCCTGC
CTTCTCCTATTCGGTGCACACTACGCGTTGCGGTGTAGGTGCACATACAT
ACACGTTTCGGTGTACTATCCGGGGTCACACAGGAGGGGGGTACCCACGC
CGGGGTTCTTCTTCTTTCATTTTTATTTTTCCCCACCCACCTCCTGCGGT
GCCTGCCTCTGAACTTTTTATCGCGAGGTGGGTACAGCAATCCCTCCCCT
CGTCATCAAACAATAAAATCGACGTTTTTGTGAGTAAATTACTAACGAGC
TTTCCAGCTTTATCGCTTTCAACGTACCAGGAACGAAAGTGAGACAAAAA
TATTGCTTCGTCGAGACTCGAACCCATGAACTGGCGCTTAGGGCCTACTA
GACCACCGGGGCGGTCGGCTGGATGTAGTGGGCCCACTAACCCAAGAAAC
ACGTGACGCCTACTAAATAGAAGTATGAGGCTGGCTCGAGCAAGCACTAC
ATGTCGTAAAGCTAGCAGTATTGGGGTGGGACAAATACGAAACCCCAGGC
AACTTGATCGTTTATGTAAAACCGTCTTCTTCTCCTCTGACACATTTTTC
TCCACGATTGTGTTAAGGCGTGCTCTGTACGAGGACAAGTACCGGCTTTG
AGGAGAGCTAAATCTAGATGCATTTTATGGTGTATCTTGCTCTTGATCAT
GTTTTGGTTCCGTGACGCACGCAGAGCCGGTACGTTGTCGCACTGCCGCG
CTTGCTGAGGGGAGAGACCTGCTCTCGAGCAGCTGCTGTGCCATTCAATA
GAAGTCCCGAAGCAGTTCGCTTCCATGCTCTGGCTGCCGTTGATGGATTT
GTAAAGCGAACGACGGTTTCTGACAGCACGCACGTTCTGACATTTACGCT
CGTTGGCCTCCTTCCTAAAAAGAATAAGGGCAGCCAATCAACGCCTGGGC
GTAGTCGGCGGCTCGGCTTGGTTGCTGCGAGATGTCGCGCTCACAAACAA
CTCGTTTTTGGTATATACTGGCTATTTTAGCTTTTGCCCGGAGAGCGGGA
GCTGGTACTCCTAGAAAAGGGAACCGGAACGGGCGGGGCCGATAACCTGT
CGGGTCAATGTAGTCATGATTAGTGCTTACTGCGCTGATTGTGTCGTGGA
AGGGAGCACCGATTCTGAGAGAAAAACACTTGGCGGATCCTTTGATCCGA
TTCTCCTTTTGTCTCCCTCTCGGTCTGTCTTCTTCCTGCCTGCTGGTCCC
TCGCATCAAGCCGATAGCCAGATACTGACCAACTGCTGTTGTTGTTTTTG
TGCCGTGGGGTGTGTGTGTGCGCAGTTGAGATACCGACTGGGGAGGACAG
GTTGAGCGGGGTGGGTGCTTTCTACGATGAGGAGGGCTGCGCGCCGGAGC
AGCAAAGCAGGAGCATTGTGGGCTGCAACCTCGCCGGGTGAGGAAAAACA
ATGGCAGTACAAAAAGAGGATACGTTCAGCCAAAGGCTTGTTCTTGTTCA
TCCTGCGTGGGAAACAGCAGTACTACTGTTTTATGTGCGACTGCGAAACG
GCGTCCGAGCTGCAGCTCTGCCTTTTACCGGGTTACCGGGTGTCGTTGCT
GAATTTTCCACACAGCATTTTTTTGTAACCTCGGGAAGATATGTTCCTCA
ATACGCATCTCCTCGATACCTCGTCCTAGTCTAGAACTTGGACAACATCT
ATTATTCGACTCGAAGCACGGTCGAATGATTAATTGGCTTTTGAGATGTT
CAGAATTTATGGAACACGCGCGCACGAAAAAAAGACAAAAAAAAAACAGC
TGACAGGGTTGAGCAAAACTTGTCCGCGTTCCGGATATCATACGTCGACT
CAATGAACAAATAGTATCCCCCGGTCAGCCGAAAGAGAAACATTGAAGAC
GGTCATGGGTTGTGGCGCTTGTCGCGAATGAGACTATTTCGTTTGACAAT
TTCTCAACAAGTCCAGAATGCTTTTCGAGGCATCGGTACACAGGCAGGCT
TCAGTTCAAACGCCGGGATGATGAGCGTTTCATGCCGACGTGCGCGGCGG
GTCAGTTCGAACCGTGTCTATTGTACGTCTTCCGGGTAATCCCTAGATCG
TACATTCCTCCGCTGCATAAAACCGCAATGTTCTGAGGGAGCTACATTTA
TGTCGAGTTTTTCCCGCGCAATATACCAGAGAGGAGTTCTGCGTTCGGGC
TGGCCGGCGAAGTTCTGAAATAAACGATAACAAATACATACCTCCGCAAG
TAAAAGCCCCCCCCTGCAGGTACTGAGACCCCTTGCAGGTACTGAGCATG
TTAGATGCACAACTTATCCACTGAACTAACAGTCAGCGCTGACTGTTAGT
TGCACATCTAACAGAGCATTCACAGCTTTGGACCAACTGGTTTTGTGCAA
CGTTCGGCGTTCCTCTATGCAGTATTCTACGGGCGGTGAAGTTGTTTTTT
CACCAAACGTGATATTTTTCACCTTTCTCAACCATACGCCAAAAAGAAAA
AAGAACGCGCGGCTCCTTCCTCTAACCGACACTTCAACGCTGACGGCAGA
ACCACTATCTCGAGTAGAAAGGGACGACGGCAGGGCTCCCCAATCCAAGC
TGTGCGACATGAGGGTGTCAACGTGTCCACTCCAAACTCGAAGAATCCGA
CGGCACCCGACGACGACGCTTGCTTGATTCTTGACCGCCCCGTTGCGATT
CTCTGTCCGCTCCAGAGATATCTCGCCAGCTCTCTCGGCCGCTAACCGCG
TGACGTCACCCCCGTCATGCCCTCCGGTTGTCTCGCTTTCTGTTGTTGCT
GATGTTGATGTTTCCAGGGTCGCCAGCTGCAGGCTGTGTGTCTTCAACCG
CGCCCTGTTCAGCCAAAACATCCTTGGCGGGGAAGAGGTGAGACACACTT
CCACCCTTCCTTTTTTTATGCGCGCAGGGAAGGTGTTCCCTGCCGAGGAA
TAAACAAAACCCTTGCTGGTTCATGGGCGGTTGGTTTCCGTGAGCCCCAT
CTGTGGCGAGCACGTCAGGCCGATTCCCACCATTGCGTTTCTCGGACACT
ATATAAGTAGTATCTGTTTCCTCCTCCTCTGTTTGTTTTTGTGTCCCTTG
GCTCTACTCAAAACGCACGAAGCGGTCGGTCATCCATCCCCTTCCGCCTC
CCGGCCCCAATCGAAGGGAAGGGTGCTTGAGGCGACGCCTATTTGGAGGT
CTTCTCCTCGAGTTTTCGCCCGAACTCGAAACCCCAAGCATGCCACAGAT
GGAAAGGTGCCGACCCCCCCCCCCCCGCTTGGCATTCCTCTTCAATTCAA
ATCCACAGGTGCCGTTTGTGGACTGCCCCTGCTGCGTGCCTGACACGTAC
GAGATGGGAGGGGACATCAGCTGCGACTTCCTCTACTCCGCAGCCCCCGT
CGCCGTCCCGCTAGCCACGCCGTCCCCGTCGGAGACCCCGGCGGCTGGGG
CGACCATGGTTCCCGGCGCCACCACGGCGCCGCTGGCGGCGGGAGAGAGG
GCGGTGGACATCGGGACGCTGGTGCCTTCTGGTGCACCCGAGACGCTAGC
GCCTACCATACCTCCGGTAAGGTGTCGGTCTGGGTGTCAGTGTTGATGTT
GTGTTCGATGATGCTGATGTTGGGATTGATTTTCATGCTGAAAATGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTCGCT
GCTTGTCGTGGCTGTTGTTGGCGCTGTGGTCGTCGCTATTGCTCCTGCCT
CTGGTTGTACCCAGTGGTTTCCACACTCGAACGAAAATCGTTCCTATCAG
CAGCCATTCCTGTAGTTTGACAGGGCCCACCGCATCTTCGGACACAGCAG
ACCTACCCCGGGAGTTAGAAGCAAAGCTGCCTTGGTTTCTTCTTTGAAGG
TATGATATCGACCTGATCCACTGCCCGGCTTCCTGTCTACCCTCGCCTCT
GGGTTGTGGCAGATTCCGATGGAGCCCTGCGAGATCGGTGCCGGGGGCGA
CACAACAGGCAACTCGACGGTATGCGTGGACGTTGCGTCTCCGTTGGACA
TTGTGAACGGCATCGGGGTAAGTGGGAAGTCCGAACAACCTAGCGATGTA
AGTCAGCTCGTAGAGCGAGCCGACCAACACCAAGAAACGTATCTCATGAC
TAGACTAGACAAAACCTGGACCAGCAGGAGGGAGCATGTGTGGATTCTAC
GCCTGTTTGTTGTTGTTGATGGGCGTTTCTTGTTACGGCTCTTGCTTCCA
ACTAGACGCAAAAGGCTCGGAGTCGTGGATGTACACCCGGTGTACCTGAA
CTCTGCTGTCCCGGTTGTCATTTATCCCGCTGCGTGCGAGGAAGTTTCTT
CCGCGCGATTCGACCTCTGCGGCCTTCCACTAGCAGTCAATTTCGGTGTA
ACCCGCTTAGGGGGTGGCTTTCTCCCTTGTTTCATGCTGGTACCTGACGT
GTGAGCTCTCGAACTTTTCCACCTGCAGTGCTTTTTCGTCTCTTCGTGCG
CACGGGGGGGGGGTTACGTGGTTTCCCTCGCTAACAAGCTGGCCGGCGCA
TGCCGTCGTTTCGTTTTCATGCCGATGCTCTCTAACTTTAGACCTACTAC
GAGCTAGGCTGCGCGGGGCTTGGGTGCAGCATCGCCGGGTTCTCGGACTG
CCGGCAGTGCATCTTCGACGCCACCGCGTATGCGGCGGTGAGTCGAGTCC
AAAAGCAAGCAAGCCACAAAAAAAATCCCCCGTATTTTTTTTGTTTTGTT
TTTACCATATGGTTGGAGTACGCCCCACTGCTGTTTGGCTTAAGTCGTTT
TTCAGATTGCTGCTGGTTTGGTGTGTACGGGTTTGTTGCTGGGGAACACG
GGTGAAACTACTGTCGGGTGACAGACCAAGCTTTTGCTAAGCCTTGTTGT
GCTCAAAGCCAAGGATCAACCTCTTTGCCGCTGGGCGGCTCAACACTGGC
TCGATCGGTAGCGATGATGGATGAGGATGCCACCCCCCGAAACGTATCAT
TTTGAAGTAATCCCGGTCACAGCAGTGGCTTTAGAAACGACTCGATTGGA
TTTTCGAGACTTTAGGTTTTTGGAGAGCGAACTTTTTGGACATTGCTGCG
GTGTCCTCCACGCCAAACAAGCACGATATGAACCCTCTCATCTTGTACTT
CACAAGCTGCATGGGTGCATACTTTATGGTGATCCCCTGTACCCTACTAG
TCCGCCACCCCCCGCCGCCCCGCAACCGTTGCGCGCATGTGCTTCGACCC
TCCTGCGAAACTCGGTACAACCTTCCAAACAAAACACAGTCTGGAGGCAT
GGACGCTCTGGTGGAGTGTCCCTGTTGCGTGCCCGTGACGTACCAGCTCC
GACCGGATGACTCGGAGTGCATCTGGCCCGCGACACCGGCGCCAACCAGC
CTAAGCGGCGCTGCTCGCCTGGGAAGATCATCCCTGGCGATTTCCGTGGT
CGTGGCCGTTGCCGGGGTTGTCGGGGGGATGTTGAAGTGA
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Coding sequence (CDS) from alignment at C-linearis_contig11:1167065..1173554-

>mRNA_C-linearis_contig11.1220.1 ID=mRNA_C-linearis_contig11.1220.1|Name=mRNA_C-linearis_contig11.1220.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2562bp|location=Sequence derived from alignment at C-linearis_contig11:1167065..1173554- (Chordaria linearis ClinC8C monoicous)
ATGCGGCAGCGACACGCATTCTGCGGCCTCCTGGGCCTCTTGCTGTGCGT
CCGCGGCGCGGTGGGGCAGAGCAATCCTGCCCCTGTTGTGCAACCGCAGC
CCACGCCTGGCCCAACCCAAGCTCCTACGGCCGAGCCTACCCCGGCCCCG
ACGCCCGGACCCACGGAAGTGCCTACCCCAGGGCCGACGAACGCGCCCAC
GATAGCCCCAACGCCGGGCCCTACACAAGATGCGGCAGCGACACGCATTC
TGCGGCCTCCTGGGCCTCTTGCTGTGCGTCCGCGGCGCGGTGGGGCAGAG
CAATCCTGCCCCTGTTGTGCAACCGCAGCCCACGCCTGGCCCAACCCAAG
CTCCTACGGCCGAGCCTACCCCGGCCCCGACGCCCGGACCCACGGAAGTG
CCTACCCCAGGGCCGACGAACGCGCCCACGATAGCCCCAACGCCGGGCCC
TACACAAGTGCCCACGTTACATCCGTCCCCAGCGCCAACGTTGGCCCCGA
CACCGGCTCCCACCCAGGCGCCAACCCTGCACCCCACCCCGGGCCCGACC
TTCAGCAAGGCTCCCACGCAGGCCCCCACACCGGCGCCAACGCCGCCGCC
AACGTTCTCCTACAGCAGCTACTGCCAGAGGCCGTACGCGTTCACGAACG
AGAGCTCCATGCCTTGCGTGCCCACGTTACATCCGTCCCCAGCGCCAACG
TTGGCCCCGACACCGGCTCCCACCCAGGCGCCAACCCTGCACCCCACCCC
GGGCCCGACCTTCAGCAAGGCTCCCACGCAGGCCCCCACACCGGCGCCAA
CGCCGCCGCCAACGTTCTCCTACAGCAGCTACTGCCAGAGGCCGTACGCG
TTCACGAACGAGAGCTCCATGCCTTGCGTTGAGATACCGACTGGGGAGGA
CAGGTTGAGCGGGGTGGGTGCTTTCTACGATGAGGAGGGCTGCGCGCCGG
AGCAGCAAAGCAGGAGCATTGTGGGCTGCAACCTCGCCGGTTGAGATACC
GACTGGGGAGGACAGGTTGAGCGGGGTGGGTGCTTTCTACGATGAGGAGG
GCTGCGCGCCGGAGCAGCAAAGCAGGAGCATTGTGGGCTGCAACCTCGCC
GGGGTCGCCAGCTGCAGGCTGTGTGTCTTCAACCGCGCCCTGTTCAGCCA
AAACATCCTTGGCGGGGAAGAGGGTCGCCAGCTGCAGGCTGTGTGTCTTC
AACCGCGCCCTGTTCAGCCAAAACATCCTTGGCGGGGAAGAGGTGCCGTT
TGTGGACTGCCCCTGCTGCGTGCCTGACACGTACGAGATGGGAGGGGACA
TCAGCTGCGACTTCCTCTACTCCGCAGCCCCCGTCGCCGTCCCGCTAGCC
ACGCCGTCCCCGTCGGAGACCCCGGCGGCTGGGGCGACCATGGTTCCCGG
CGCCACCACGGCGCCGCTGGCGGCGGGAGAGAGGGCGGTGGACATCGGGA
CGCTGGTGCCTTCTGGTGCACCCGAGACGCTAGCGCCTACCATACCTCCG
GTGCCGTTTGTGGACTGCCCCTGCTGCGTGCCTGACACGTACGAGATGGG
AGGGGACATCAGCTGCGACTTCCTCTACTCCGCAGCCCCCGTCGCCGTCC
CGCTAGCCACGCCGTCCCCGTCGGAGACCCCGGCGGCTGGGGCGACCATG
GTTCCCGGCGCCACCACGGCGCCGCTGGCGGCGGGAGAGAGGGCGGTGGA
CATCGGGACGCTGGTGCCTTCTGGTGCACCCGAGACGCTAGCGCCTACCA
TACCTCCGATTCCGATGGAGCCCTGCGAGATCGGTGCCGGGGGCGACACA
ACAGGCAACTCGACGGTATGCGTGGACGTTGCGTCTCCGTTGGACATTGT
GAACGGCATCGGGATTCCGATGGAGCCCTGCGAGATCGGTGCCGGGGGCG
ACACAACAGGCAACTCGACGGTATGCGTGGACGTTGCGTCTCCGTTGGAC
ATTGTGAACGGCATCGGGACCTACTACGAGCTAGGCTGCGCGGGGCTTGG
GTGCAGCATCGCCGGGTTCTCGGACTGCCGGCAGTGCATCTTCGACGCCA
CCGCGTATGCGGCGACCTACTACGAGCTAGGCTGCGCGGGGCTTGGGTGC
AGCATCGCCGGGTTCTCGGACTGCCGGCAGTGCATCTTCGACGCCACCGC
GTATGCGGCGTCTGGAGGCATGGACGCTCTGGTGGAGTGTCCCTGTTGCG
TGCCCGTGACGTACCAGCTCCGACCGGATGACTCGGAGTGCATCTGGCCC
GCGACACCGGCGCCAACCAGCCTAAGCGGCGCTGCTCGCCTGGGAAGATC
ATCCCTGGCGATTTCCGTGGTCGTGGCCGTTGCCGGGGTTGTCGGGGGGA
TGTTGAAGTGATCTGGAGGCATGGACGCTCTGGTGGAGTGTCCCTGTTGC
GTGCCCGTGACGTACCAGCTCCGACCGGATGACTCGGAGTGCATCTGGCC
CGCGACACCGGCGCCAACCAGCCTAAGCGGCGCTGCTCGCCTGGGAAGAT
CATCCCTGGCGATTTCCGTGGTCGTGGCCGTTGCCGGGGTTGTCGGGGGG
ATGTTGAAGTGA
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