prot_C-linearis_contig11.1220.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1220.1
Unique Nameprot_C-linearis_contig11.1220.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length427
Homology
BLAST of mRNA_C-linearis_contig11.1220.1 vs. uniprot
Match: A0A6H5KW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW91_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 1.750e-122
Identity = 195/320 (60.94%), Postives = 226/320 (70.62%), Query Frame = 0
Query:  107 TFSKAXXXXXXXXXXXXXXXSYSSYCQRPYAFTNESSMPCVEIPTGEDRLSGVGAFYDEEGCAPEQQSRSIVGCNLAGVASCRLCVFNRALFSQNILGGEEVPFVDCPCCVPDTYEMGGDISCDFLYSAAPVAVPLATPSPSETXXAGATMVPGATTAPLAAGERAVDIGTLVPSGAPETLAPTIPPIPMEPCEIGAGGDTTGNSTVCVDVASPLDIVNGIGTYYELGCAGLGCSIAGFSDCRQCIFDATAYAASGGMDALVECPCCVPVTYQLRPDDSECIWPATPAPTSLSGAARLGRSSLAISVVVAVAGVVGGMLK 426
            TFSKA   XXXXXXXXXXX  Y S+C+RPY F NES + CVE+ T +DR +GVGAFYDE GCA  Q     VGC+L GV SCRLCVF+RAL+SQ IL GEEVPFVDCPCCVP+ Y +GGDI CDF+ SAAP+ VP ATPSP+       TMV G T++PL   E    + TL P             I MEPCE+G  GDTTG+ST+CVD+AS LD+ NGIGTYYE  C GLGC IAG  DCRQCIFD TAYAASGG DALVECPCCVPV YQLRPD SEC WPATP P ++ G+   G   +  + V +  G++GG+L 
Sbjct:  107 TFSKAPTPXXXXXXXXXXXFPYYSFCERPYPFANESDILCVEMATDQDRANGVGAFYDELGCAGAQSGTGFVGCSLGGVPSCRLCVFHRALYSQTILNGEEVPFVDCPCCVPEVYGVGGDIDCDFVTSAAPIPVPAATPSPTMAPQXXXTMVSGVTSSPLVEDEARGGVATLAPVMXXXXXXXXXXTIAMEPCEVGVAGDTTGDSTLCVDIASTLDLANGIGTYYEANCEGLGCDIAGNVDCRQCIFDETAYAASGGTDALVECPCCVPVIYQLRPDSSECTWPATPTPITVEGSG--GSRPVIPAAVASAVGIIGGLLS 424          
BLAST of mRNA_C-linearis_contig11.1220.1 vs. uniprot
Match: D8LN92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN92_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 1.060e-107
Identity = 167/279 (59.86%), Postives = 198/279 (70.97%), Query Frame = 0
Query:  149 IPTGEDRLSGVGAFYDEEGCAPEQQSRSIVGCNLAGVASCRLCVFNRALFSQNILGGEEVPFVDCPCCVPDTYEMGGDISCDFLYSAAPVAVPLATPSPSETXXAGATMVPGATTAPLAAGERAVDIGTLVPSGAPETLAPTIPP-IPMEPCEIGAGGDTTGNSTVCVDVASPLDIVNGIGTYYELGCAGLGCSIAGFSDCRQCIFDATAYAASGGMDALVECPCCVPVTYQLRPDDSECIWPATPAPTSLSGAARLGRSSLAISVVVAVAGVVGGMLK 426
            + T  DR +GVGAFYDE GCA  Q     VGC+L  V +CRLCVF+RAL+SQNIL GEEVPFVDCPCCVP+ YE+GGDI CDF+ SA P+ VP A       XX      PG T+AP A  E +V + TL    A  T APT  P I MEPCE+G  GDTTG+ST+CVD++SP+D+ NGIGTYYE  C GLGC IAG  DCRQCIFD TAYAASGG DALVECPCCVPV+YQLRPD SEC WPATP+P ++ G+   G   +  + V +  G++GG+L 
Sbjct:    1 MATDADRANGVGAFYDELGCAGAQSGTGFVGCSLGDVPNCRLCVFHRALYSQNILEGEEVPFVDCPCCVPEVYEVGGDIDCDFVASAPPIPVPAAXXXXXXXXXXXXXXXPGVTSAPPAEDEASVGVATLAXVMA-VTPAPTAAPVIAMEPCEVGVAGDTTGDSTLCVDISSPVDLANGIGTYYEANCEGLGCDIAGNEDCRQCIFDETAYAASGGTDALVECPCCVPVSYQLRPDSSECTWPATPSPINVEGSG--GSRPVIPAAVASAVGIIGGLLS 276          
BLAST of mRNA_C-linearis_contig11.1220.1 vs. uniprot
Match: D8LDL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL0_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 7.100e-101
Identity = 161/304 (52.96%), Postives = 199/304 (65.46%), Query Frame = 0
Query:  132 CQRPYAFTNESSMPCVEIPTGEDRLSGVGAFYDEEGCAPEQQSRSIVGCNLAGVASCRLCVFNRALFSQNILGGEEVPFVDCPCCVPDTYEMGGDISCDFLYSAAPVAVPLATPSPSETXXAGATMVPGATTAPLAAGERAVDIGTLVPSGAPETLAPTIPPIPMEPCEIGAGGDTTGNSTVCVDVASPLDIVNGIGTYYELGCAGLGCSIAGFSDCRQCIFDATAYAASGGMDALVECPCCVPVTYQLRPDDSECIWPATPAPTSL----------SGAARLGRSSLAISVVVAVAGVVGGML 425
            C+RPY ++NES +PCV++ T  D+ SG GAFYDEEGC P+ +S S+VGC   GV +CRLCVFNR LFS+ ILGGEEVPFVDCPCCVPDTYEMGGDI C+F YS+ PV+ P  TP   E                   G  +             TLAPTIP   MEPCE  AGG+++  + +CVD+AS +D  +GIGTYYE GC G+GC IAG  DCRQC+FD+ AYA SGG   L  CPCCVP+TY+LRP+ SEC+WP TP+PT+           +GAAR G +     VV+A   VVGG++
Sbjct:   39 CERPYTWSNESEIPCVDMVTAVDKASGAGAFYDEEGCGPDAESISVVGCAHGGVGNCRLCVFNRGLFSETILGGEEVPFVDCPCCVPDTYEMGGDIDCEFAYSSPPVSAP--TPVSVE-------------------GNASTPXXXXXEGDTNSTLAPTIP---MEPCETSAGGNSS--ALLCVDIASAVDWDDGIGTYYESGCQGVGCDIAGHVDCRQCVFDSEAYATSGGNLELAACPCCVPITYKLRPEGSECVWPPTPSPTAAPTTAEEWSERNGAARPGMAFGGPLVVIAA--VVGGLV 314          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KW91_9PHAE1.750e-12260.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN92_ECTSI1.060e-10759.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDL0_ECTSI7.100e-10152.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15071MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBERcoord: 26..133
NoneNo IPR availablePANTHERPTHR15071:SF20coord: 26..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 426..426
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..406
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 407..425
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.908

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1167065..1173554 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1220.1mRNA_C-linearis_contig11.1220.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 1167065..1173554 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1220.1 ID=prot_C-linearis_contig11.1220.1|Name=mRNA_C-linearis_contig11.1220.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=427bp
MRQRHAFCGLLGLLLCVRGAVGQSNPAPVVQPQPTPGPTQAPTAEPTPAP
TPGPTEVPTPGPTNAPTIAPTPGPTQVPTLHPSPAPTLAPTPAPTQAPTL
HPTPGPTFSKAPTQAPTPAPTPPPTFSYSSYCQRPYAFTNESSMPCVEIP
TGEDRLSGVGAFYDEEGCAPEQQSRSIVGCNLAGVASCRLCVFNRALFSQ
NILGGEEVPFVDCPCCVPDTYEMGGDISCDFLYSAAPVAVPLATPSPSET
PAAGATMVPGATTAPLAAGERAVDIGTLVPSGAPETLAPTIPPIPMEPCE
IGAGGDTTGNSTVCVDVASPLDIVNGIGTYYELGCAGLGCSIAGFSDCRQ
CIFDATAYAASGGMDALVECPCCVPVTYQLRPDDSECIWPATPAPTSLSG
AARLGRSSLAISVVVAVAGVVGGMLK*
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