prot_C-linearis_contig104.920.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.920.1
Unique Nameprot_C-linearis_contig104.920.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length935
Homology
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: D8LE98_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE98_ECTSI)

HSP 1 Score: 1263 bits (3268), Expect = 0.000e+0
Identity = 703/841 (83.59%), Postives = 748/841 (88.94%), Query Frame = 0
Query:    1 MTSQRSTTLAVLGLLAGFVNVDAFRLIPASPGAVSSSLARAQQQSAVASRGASTRRTWRSAHGLTMSSP--AVGNDLPATEELED-KPSRDSVMDELDAILGDVKMDSTAKPASSA-KNTAAVLGQDLDSLLGAPGAPPSAAATPATKQNSDVGDLNLDDLLGPGANSAPPQRYSGGGTAXXXXXXXAPPASRAQPA--------QGWGSPTDGQAPPPQQRMSYSGEFGAASGRYGDMATAAASKVLKGDQLVSLVEVGDEGACPVEEKDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDIITYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVPGGGRFGGGXXXXXXXXXXXXXXXXXXXXXXRSSYG 829
            MTS+ ST LAVLGLLAGFVNVDAF LIPA+PGAVSSS+ RA+  +AVAS     R TWR+ HGL+MSS   AV N   AT E++D KP R SVMDELDAILGDV+ DS  KPAS      AA L QDLDSLLG+  + P A AT A  +NS + DL+LDDLLGPGANSAPPQRYSGGGTA        P A R  P         Q WG+P  GQ    QQRMSYSGEFGAASG+YGD A   ASK LKGDQ+VSLVEVG+EGACPVEEKDVDPKTVAALKARGIE FTPVQAITYDH+L+GRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDH++RTYQRGRSPRFLVVCPTRELARQVY EL+TLG  FGLKADVFHGG+AYGPQM+SLSDGLDILVATPGR+MDHLQ+GAL L+DVRHAVLDEADEMLNMGFADDIETIFSYV+V+ECQVLLFSATVPSWVRNIANKYTANPLTVDAVGK+VNKLATTVKHLSIEVS+RHRSSMLEDIITYYGKGSHAIVFTNSKAECD+L+DGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSD+M++FFRESA+ELL EEES DKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVG+IA+AKDPTTAVFDM+T+AADQL+KFSKEQNLESIEF MCPVLP+LQE PGG RFGGG XXXXXXXXXXXXXXXXX    RSSYG
Sbjct:    1 MTSRSSTALAVLGLLAGFVNVDAFSLIPAAPGAVSSSVTRAK--TAVASLEPPARNTWRARHGLSMSSTSSAVENAGAATGEVDDSKPPRASVMDELDAILGDVQQDSGTKPASGGGMGAAAPLDQDLDSLLGSATSAPPATATVAAPKNSGLDDLDLDDLLGPGANSAPPQRYSGGGTAEGGGSF--PAAGRGPPVGGASSDGQQAWGAP--GQQ---QQRMSYSGEFGAASGKYGDTAARTASKELKGDQMVSLVEVGEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGG-RFGGGRXXXXXXXXXXXXXXXXXYRGNRSSYG 831          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A836CKS6_9STRA (RNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS6_9STRA)

HSP 1 Score: 618 bits (1593), Expect = 6.010e-209
Identity = 325/549 (59.20%), Postives = 409/549 (74.50%), Query Frame = 0
Query:  259 DVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYT----ELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDIITYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESG----DKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGF-EPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVPGGGR 798
            +V   T+  L  +GI +FTPVQA+TY+H+L GRD+I KSRTGTGKTIAFGLPVIQHL RFA+D   R+ +R  +P    +  T  LA   Y+    EL  L +  G+  + F+GG++YGPQ  +L  G+D++V TPGR++DH+QKG L L++++HAVLDEADEMLNMGFAD IE +F+ VN+ ECQVLLFSATVP WVR I+  Y  NPL VDAVG   N+LATTVKHL+IE  +R+R+ MLED+I  YGKGS AIVFT +K ECD+L+ G  FKTL+SQVLHGDI Q+QR+ TI  FR   FQVLVATDVAARGID+S+IDLVVQYRPP DPD+YVHRSGRTGRAGR G  VTL+A+NE RD++KIE+ +G+GF+FER AVPSA QVM +AG VA + +  VS +++ FF  +A+ELL E ++     D E LLA+CLAAIARKT + +RS+LTGEPD  TVQMVA + +T+GDV FAV KL RA G   P +GKIA+ KD  TAVFDM   AA  LI  + +Q L++I+F++C  LP L     GGR
Sbjct:   57 EVIQSTIDVLLGKGITHFTPVQAVTYEHILAGRDMIAKSRTGTGKTIAFGLPVIQHLARFADDADSRSSKRYAAP----LMRTYHLATNTYSKVADELAQLAQPHGMSVECFYGGASYGPQESALRRGVDVVVGTPGRLIDHVQKGNLDLSELKHAVLDEADEMLNMGFADAIEELFARVNIPECQVLLFSATVPDWVRRISAAYLKNPLQVDAVGTTDNRLATTVKHLAIETPSRNRAHMLEDVIAVYGKGSRAIVFTQTKRECDELAAGNAFKTLSSQVLHGDIGQNQREVTIGQFRKGQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRLGTCVTLFADNERRDVQKIEKAIGKGFKFERAAVPSATQVMEVAGKVALKALDTVSADVVPFFTPAARELLAESQADGAELDTEQLLARCLAAIARKTEIQQRSILTGEPDMATVQMVAHQPMTTGDVTFAVNKLARAGGGPSPNIGKIAIGKDAHTAVFDMTQAAAAALIDVANDQELKAIKFTLCTELPELSTQEYGGR 601          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A835ZP19_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP19_9STRA)

HSP 1 Score: 531 bits (1367), Expect = 4.380e-173
Identity = 286/486 (58.85%), Postives = 344/486 (70.78%), Query Frame = 0
Query:  254 PVEEKDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDIITYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEE---ESG-DKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGR 735
            PV+ KDVD KTV  L+++GIE FTPVQ++TY+H+L GRDI+ +SRTGTGKTIAFGLPVIQHLGRFA+D   RT  RGR PRFLVVCPTRELA+QV  EL  L R   L+ + F+GGS+YGPQ  +L  GLDI+V TPGR++DH+ KG L L++++HAVLDEADEMLNMGFADDIE IFS V++  CQVLLFSATVP WV+ I+  Y  NPL+  A+ K                                         T+++  C          T   QVLHGDI Q+QR+ TI  FR   FQVLVATDVAARGID+S+IDLVVQYRPP DPD+YVHRSGRTGRAGR GV VTLYA+NE RD++KIE+ VG+GF+FER  VPS  QVM +AGTVA + +  VS+E++ FF  +AKEL+ E    E G D E LLA+CLAAIARKT + +RSMLTGEPD  TVQ+ A R LT+GDVMFAV KL R
Sbjct:  148 PVDSKDVDDKTVEILRSKGIEFFTPVQSVTYEHILGGRDIVARSRTGTGKTIAFGLPVIQHLGRFADDADTRTNTRGRRPRFLVVCPTRELAKQVADELSQLARPHNLQVECFYGGSSYGPQESALRRGLDIVVGTPGRLIDHINKGNLDLSELKHAVLDEADEMLNMGFADDIEEIFSKVDIPACQVLLFSATVPDWVKRISAAYLKNPLSFIALLK-----------------------------------------THNRPSC----------TYAVQVLHGDIGQNQREVTIGQFRKSQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRSGVCVTLYADNERRDMQKIERAVGKGFKFERAPVPSPAQVMEVAGTVALKSLTAVSEEVVPFFSSAAKELIAESTASEGGLDTEKLLARCLAAIARKTELQQRSMLTGEPDMATVQLTAHRPLTAGDVMFAVDKLAR 582          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S2V2B9_9STRA (RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B9_9STRA)

HSP 1 Score: 494 bits (1271), Expect = 8.740e-159
Identity = 263/540 (48.70%), Postives = 366/540 (67.78%), Query Frame = 0
Query:  259 DVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDIITYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKEL------LLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQ-LTSGDVMFAVGKLG-RAAGFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLL 790
            +VD +    L A+GI +FT +Q  +   +L G+DIIG+SRTGTGKT+AF LP++Q L    ++    T QRGR PR L++CPTRELA+QV  E++ +   F L+   F+GGSAYGPQ  +L  GLDI+V TPGRVMD + +G L L +++HAVLDEADEMLNMGFA+D+ETIF   +    QVL+FSAT P WV+ I+++YT  P+++DAVG +  +LATTV H+SIEV    ++ +LED+I  +GKGS AIVF  +KAECD L+    FK++++Q LHGD+SQ  RD  IK F+   FQVLVATDVAARG+D+S +DLVVQ  PP D D++VHRSGRTGRAG+ G AV LY+  E   I+++E+ +G  FRFE+ + P+ +QVM  A  VA   +  V+ +++ +F + A+++ EE     +E+      LL+KCLAAI+ K  +  RS+LTG+PD +TV M   RQ L + D  F V KL  R + F  ++GKI  ++D  + VFDM  +AAD L++ +        +FS+C  LP L
Sbjct:  199 EVDDRIKKTLAAKGITHFTLIQEQSLKPILEGKDIIGRSRTGTGKTVAFTLPLLQKL----DEDPSATRQRGRDPRVLILCPTRELAKQVEAEINDMSTPFRLQTHCFYGGSAYGPQANALRGGLDIVVGTPGRVMDLINRGDLRLQNIQHAVLDEADEMLNMGFAEDVETIFGNFDTDSAQVLMFSATTPDWVKEISSRYTDKPVSIDAVGNSQTRLATTVNHVSIEVDRDLKAGILEDLIAVHGKGSRAIVFAQTKAECDHLTTS-AFKSVSAQPLHGDMSQKLRDTCIKQFKNHKFQVLVATDVAARGLDISGVDLVVQLNPPFDTDTFVHRSGRTGRAGQKGTAVMLYSAQEFGGIKRLERELG--FRFEKSSPPTTQQVMQAASNVAEHSLSEVNPKVVAYFEDKAQQMAEEVMPEGQEVPAELTNLLSKCLAAISGKKDIQERSILTGKPDMMTVMMKTERQQLEARDAFFVVNKLSNRGSDFSNLLGKIETSQDGMSLVFDMDIEAADSLVETATISPFRDFQFSICEKLPPL 731          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S2DBW6_9STRA (RNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBW6_9STRA)

HSP 1 Score: 484 bits (1246), Expect = 1.490e-155
Identity = 269/578 (46.54%), Postives = 372/578 (64.36%), Query Frame = 0
Query:  249 DEGACPVEE-KDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARH--RSSMLEDIITYY-GKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESA----KELLEEEESGDKEL-----------LLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVP-----GGGRFGGG 802
            ++G  P++    V P+TVA L  +G  +FT +Q+  +  V  GRD+I +SRTGTGKTIAFGLP+++ +         R   RGR+PR LV+ PTRELARQV  EL TLGR +     VFHGG+ YGPQ  SL +G+DILVATPGR++DHL +G L L DVRH VLDEADEML+MGF+ DIE + S+V++   Q LLFSAT PSW++ I+ +Y  +PL +DAVG N  + ATTV H ++ V      R S+LED+IT   G  S  IVFT +K E D+LS G  F+ L++ VLHGD+SQ QRD T+  F++  F+VLVATDVAARGID+S++D+VVQ   P++ DSYVHR+GRTGRAG+ GV++ LY + + R + ++E  +G GF+F++   P+   V+S A   A   +  V + +L + ++ A    +E++E+ +S   E            L+A+ LA    KT V   S++TGE    T+ + APR L   DV+FAV KL R   FE  +GKI + KDP+ AVFD+ +  A + ++F +EQ+L+   F +C  LP LQ V      GGG  GGG
Sbjct:  137 NKGLTPIDGFSQVHPRTVADLSKKGFTHFTDIQSQAFLPVFEGRDVIARSRTGTGKTIAFGLPIVEAIAASG-----RELDRGRAPRLLVMAPTRELARQVAAELGTLGRAYRFSVAVFHGGAPYGPQEGSLRNGIDILVATPGRILDHLNRGGLKLDDVRHVVLDEADEMLDMGFSKDIEEVLSFVDMDAAQTLLFSATTPSWIQRISAQYMTDPLRLDAVGANEQRTATTVAHKAMLVPDNDEVRMSLLEDVITVEAGVESKTIVFTQTKREADELSSGSAFRVLSAGVLHGDLSQKQRDVTLAQFKSGKFKVLVATDVAARGIDISNVDVVVQTSMPQNSDSYVHRAGRTGRAGKKGVSIVLYTQRQRRGVSRLEHEIGHGFKFQKHTAPTPSTVISAAADNAVAALPVVDETVLSYLKDPASKLYEEIIEKAQSNTPEDEAVDVADATSDLIARLLALATGKTEVKSWSLMTGELGITTLMVKAPRALKQSDVVFAVSKLARHGEFEINIGKIQLGKDPSEAVFDLPSSQALKFMQFVEEQDLQKFAFEVCSELPELQFVADRYGGGGGYRGGG 709          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A1Z5KKE6_FISSO (RNA helicase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKE6_FISSO)

HSP 1 Score: 454 bits (1167), Expect = 4.060e-143
Identity = 271/594 (45.62%), Postives = 359/594 (60.44%), Query Frame = 0
Query:  260 VDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQ--RGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYV---NVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEV--SARHRSSMLEDIITYY------------------------------GKGSH--------AIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARK-THVTRRSMLTGEPDKVTVQMVAPRQ-LTSGDVMFAVGKLGRAAG------FEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVPGGGRFG 800
            +D + +  L +RGI +FT VQ   +D VL GRD+IG+SRTGTGKT+AFGLP I  L +   + +E   +  RGR P  LV+CPTRELARQV  EL  +    GL  DVFHGG +Y PQ ++LS GLDI+V TPGRVMDHL +G LSL +++  VLDEADEMLNMGFA+D+E I       N  + Q LLFSAT P WV  I  +Y  N L +DA G    ++A+TV+HL+++V      + ++LEDII                                  K  H         IVF  +K   D+L  G  FK+LT+Q LHGD+SQ QRD T+ AFRA  F VLVATDVAARGID+ D+DLVVQ  PPRD D+YVHRSGRTGRAG  GV+V ++   + RDI +IE+ +G  FRF+    PS E  ++ A   +    +G+ +E+   F ESA  LL +E+  D   ++A+CLAAI+R+ T V  RS+LTGE   VTVQM+  R+ +   DV+F V KL R +       FE  +GKI +A+D  TA+FDM+ + A +L++FSK+ +     FS+   +    EV  G  FG
Sbjct:   98 LDSRVLDVLNSRGITHFTKVQGEAFDPVLAGRDVIGRSRTGTGKTLAFGLPSIARLNKLLANRREANGRLPRGRLPGMLVLCPTRELARQVKDELAAVAEPLGLYVDVFHGGVSYDPQSRALSQGLDIVVGTPGRVMDHLDRGTLSLNELQIVVLDEADEMLNMGFAEDVEVILEGAGKSNKDKTQCLLFSATTPKWVNEIGRRYQRNVLEIDATGNQDARVASTVRHLAVQVPPGVSAKKAILEDIIAVEISKDAGGDSESATDESENEFHNPVAAAAKKAKKQHLQQKIFGKTIVFCETKKMADELVSGGVFKSLTAQALHGDVSQKQRDATLNAFRAGAFNVLVATDVAARGIDIQDVDLVVQMDPPRDVDTYVHRSGRTGRAGNKGVSVLMFNPQQSRDIVRIERDLGHNFRFQLTGPPSIEAALNAAAKTSALACQGIPEEVSTHFEESAAALLADEDE-DPVKVVARCLAAISRRATQVESRSLLTGEVGMVTVQMMNERRSVAPNDVLFTVSKLARLSRESADLTFENDIGKI-LARDDKTAIFDMSLEDAKKLVEFSKDVDAGGNTFSILKEM----EVERGNNFG 685          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: B7G0R3_PHATC (RNA helicase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0R3_PHATC)

HSP 1 Score: 452 bits (1164), Expect = 3.330e-142
Identity = 261/603 (43.28%), Postives = 369/603 (61.19%), Query Frame = 0
Query:  257 EKDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKER----TYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYV---NVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVG-KNVNKLATTVKHLSIEVS--ARHRSSMLEDIITYY--------------------------GKGSHA---------IVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARK-THVTRRSMLTGEPDKVTVQMVAPR--QLTSGDVMFAVGKLGRAAG------FEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVP----GGGRFGG 801
            E  +D + +  L  +GI +FTPVQA  +  V+  RD+IG+SRTGTGKT+AFGLP +  L  F  ++ +R      + GR    +++CPTRELARQV  EL  + R  GL  +VFHGG +Y PQ ++L  G+D++V TPGRV+DH+++G L L++   AVLDEADEMLNMGFADD+E +   V   N Q+ Q LLFSAT PSWV+ I  +Y  + L +D+   K   ++A TV+HL+++++  A  + S+LEDII                              KG+ A         IVFT +K E D+L  G  FK+LT+Q LHGD+ Q QRD T+ AFR+  F VLVATDVAARGID+ D+DLV+Q+ PPRD D+YVHRSGRTGRAG+ GV+V L+ + + RDI +IE+ +G GF+F+    PSAE  ++ A   +    + + +E  EFF+ESA +LLE ++  D   ++A+CLAA++R+ + V  RS+LTG+    TV+MV  R   + + DVMF +GKL R +       F+  VG+I    +  + VFDM  + A  L+KFSK  +     F +   L + ++      GGGR GG
Sbjct:  141 EAGLDQRVIDVLSEKGITSFTPVQAEAFGPVMARRDVIGRSRTGTGKTLAFGLPALTRLVTFTTENGKRDARGVMKSGRKVSMIILCPTRELARQVQEELSQVARPLGLFVEVFHGGVSYDPQSRALRQGVDVIVGTPGRVIDHIERGTLDLSECDIAVLDEADEMLNMGFADDVEVVLKNVGSNNPQKTQCLLFSATTPSWVKEIGRQYQKDVLAIDSTADKGGARVAETVRHLAVQLAPGADAKRSVLEDIIAVEISKDADIGKIELEIANPIAAAAHKRKNKGNQAMQQKIFGKTIVFTETKREADELVSGGVFKSLTAQALHGDVGQKQRDSTLAAFRSGAFNVLVATDVAARGIDIQDVDLVIQFDPPRDVDTYVHRSGRTGRAGKKGVSVLLFNQRQSRDIVRIERDLGHGFKFDLVGPPSAEATLNAAAKTSAIATQSIPEETAEFFKESAAKLLESQDPVD---VVARCLAAVSRRASEVQSRSLLTGQVGFATVEMVNERGRPVAANDVMFTIGKLSRMSNQEGDLAFDSQVGRIQTNSESGSVVFDMNVEDAKNLVKFSKTVDAGGAAFQLLKALAVERDRNFGRMGGGRDGG 740          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S3ZWQ0_9STRA (RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWQ0_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 3.660e-141
Identity = 268/622 (43.09%), Postives = 356/622 (57.23%), Query Frame = 0
Query:  242 VSLVEVGDEGACPVEEKDVDPKTVAA---------LKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFS-------------------------------------YVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARH--RSSMLEDIITY-------------YGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEE--ESGDKEL-LLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKL--------GRAAGFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQ 791
            V  V VG+E   P  E + DP  +           L  RGI  FT +Q  +Y+ V  GRD++GKSRTGTGKT+AFGLP+I+ L     + +    +RGR P  LV+ PTRELA+QV+ EL  L    G     FHGG +YGPQ  +L  G+DILVAT GRV+DH+ +G L L D  H VLDEADEML+MGFADD+E IF                                          +  Q LLFSAT P W++ +  ++  + + VD VG    + ATTV H ++ V   +  R+S+LEDII+                 G   IVFT +K ECD+L+ G  F+ L++QVLHGDI Q QR+ T+  FR   F VLVATDVAARGIDV  +DLVVQ+R PRD + YVHRSGRTGRAGR G AV LY + E RD+R +E+  G   +F+R   PSA +V+  A   A   +  V D+++  F E+AK+L  +E  E+ D+   L+A+CLAA+AR+  +  RS+LTGE D+ T+ M APR L + DV++AV KL        G        VG + V K+P+ AVFD+ +  A +L+ F +EQN     F +C VLP LQ
Sbjct:   65 VEDVVVGEE-VVPDAEPEKDPMAIEGRISDRQAERLAERGITTFTEIQHRSYEPVFEGRDLLGKSRTGTGKTVAFGLPIIEKLAEMRSNGEYDHKRRGRGPAMLVLTPTRELAKQVHDELKYLADTHGFSTTCFHGGVSYGPQEGALRRGVDILVATVGRVIDHIDRGNLQLNDAYHVVLDEADEMLSMGFADDVERIFGECPAGKAKGMGSGGGAPAPDDAFDLDELLGEEAPPAPVAESRRPQTLLFSATSPGWIKKMTRRFMTDHVFVDVVGDATQQAATTVTHKAVLVPRSNDARASLLEDIISVELSQRQGQVTDEQQNGGGRVIVFTATKRECDELAGGPAFQRLSAQVLHGDIGQSQREATLAQFRRGQFSVLVATDVAARGIDVKGVDLVVQFRTPRDAEGYVHRSGRTGRAGRDGTAVVLYDDREERDVRSLERETG--VKFQRLGPPSAGRVLEAASLDAARALTRVQDDVVPHFLETAKQLCADELAETSDEAASLVARCLAAVARQNELRARSVLTGEADRTTLLMSAPRPLKTSDVVYAVSKLLERVPKQEGATPNDNDRVGAVRVCKEPSQAVFDVRSTTAQRLLAFCEEQNFNKFTFEVCEVLPQLQ 683          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S3V908_9STRA (RNA helicase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V908_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 1.110e-139
Identity = 262/592 (44.26%), Postives = 350/592 (59.12%), Query Frame = 0
Query:  258 KDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERT----YQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYV---NVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEV--SARHRSSMLEDIITY---------------------------------YGKGSHA---------IVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARKTH-VTRRSMLTGEPDKVTVQM--VAPRQLTSGDVMFAVGKLGRAA------GFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPL 789
            K +D + +  L A+GI  FT VQ   ++ VL GRD+IG+SRTGTGKTIAFG P I  +   A+ +         +RGR   FLV+CPTRELARQV  EL  +G+   L   +FHGG +Y PQ ++L +G+DILV TPGRV+DH+Q+G L+L++    VLDEADEMLNMGFADD+E I   V   N Q+ Q LLFSAT P W++ I   Y +NP+++DA   N  + ATTV+H++I+V      + S+LEDII                                      G++A         IVFT +K + D+L  G  FK+L++Q +HGDI Q QRD T+ AFRA  F VLVATDVAARGID+ D+DLVVQ+ PPR+ D+YVHRSGRTGRAG+ G +V L+   + RDI KIE+ VG  F+FE    PS+E  M  A   +    + V D    +F+E+A  LL   E  +   ++AKCLAAI+R+   V  RS+LTGE    T++M     R +T GDVM+ + KL R +      GF+  VGKI        AVFD+  D A +LI FSK+ +    +F +   L L
Sbjct:  187 KGMDQRLIDTLSAKGITTFTEVQGKAFEPVLAGRDVIGRSRTGTGKTIAFGFPTIHRIAEMAKTNGNMDSYGKMRRGRGVSFLVLCPTRELARQVGDELSLVGKPLNLYTTIFHGGVSYDPQARALRNGIDILVGTPGRVIDHIQRGNLNLSECDTVVLDEADEMLNMGFADDVELILDGVGSSNEQKTQCLLFSATTPRWIKEIGRNYQSNPISIDASADNSARTATTVRHIAIQVPPGPDSKKSILEDIIAVEISKDIDKAKIAGEDKEEEDLSHNPIAMAAXXXXXXGNNAMQQKIFGKTIVFTETKRDADELVSGGVFKSLSAQAIHGDIGQKQRDATLNAFRAGAFNVLVATDVAARGIDIKDVDLVVQFSPPREVDTYVHRSGRTGRAGQKGTSVLLFDPRQARDIVKIERSVGHNFKFELAGPPSSEMAMIAASKTSAIACQSVPDSTSAYFKEAATNLLAGGEPAED--IIAKCLAAISRRAGGVESRSLLTGEGGLATIEMSNTTGRPVTPGDVMYTISKLSRMSKQGDDLGFDSDVGKIKSNAQTGVAVFDVGVDDAKKLIDFSKDIDAGGAQFRILKELEL 776          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S4R924_9STRA (RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R924_9STRA)

HSP 1 Score: 445 bits (1145), Expect = 1.470e-139
Identity = 262/579 (45.25%), Postives = 352/579 (60.79%), Query Frame = 0
Query:  265 VAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYV---NVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVN-KLATTVKHLSIEVSARHRS--SMLEDIITY----------YGKGSH----------------------------------AIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARKT-HVTRRSMLTGEPDKVTVQMV--APRQLTSGDVMFAVGKLGRAAG-------FEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSM 783
            +  L A+GI  FTPVQ   +  V+ GRD+IG+SRTGTGKT+AFGLP I  L    E  +     RGR P  +++CPTRELARQV+ E+  + R  GL + VFHGG +YGPQ  +L  GLDILV TPGRV+DHL +G + L++V   VLDEADEMLNMGFA+D+E I   V   N ++ Q LLFSAT P WV+ I N+Y  + +++D+       + ATTV+H++I+V   H S  S+LEDII            +GK                                      IVFT +K + D+L  G  FK+LT+Q LHGD+ Q QRD T+ AFRA  F VLVATDVAARGID++D+DLV+Q+ PPRD D+YVHRSGRTGRAGR G +V L+  N+ RDI KIE+ +G GF+FE    PS E  ++ A   +    + V +E  +FF ++A  LLE  E  D + ++A+CLAAI+R++  V  RS+LTGE   VTV+M     R ++ GDVMF V KL R +        F+  VGKI    +  +A+FDM  + A +L++FSK+ +     FS+
Sbjct:  112 IDVLSAKGITQFTPVQGEAFAPVVAGRDVIGRSRTGTGKTLAFGLPSITRLTAPDETGQVPPRLRGRKPSMVILCPTRELARQVHEEVAHVARPLGLFSAVFHGGVSYGPQASALRQGLDILVGTPGRVIDHLDRGNIDLSEVDIVVLDEADEMLNMGFAEDVEHILGGVGSANEKKTQFLLFSATTPPWVKEIGNQYQKDVISIDSTSDETGARTATTVRHMAIQVPPGHDSAKSILEDIIAVEISKDIDPHAFGKTKEQEELAAINPIAAXXXXXXXXKNANSAMQQKIFGKTIVFTETKRDADELVSGSIFKSLTAQALHGDVGQKQRDATLAAFRAGAFNVLVATDVAARGIDITDVDLVIQFEPPRDVDTYVHRSGRTGRAGRKGTSVLLFRPNQSRDIVKIERSLGHGFKFELAGPPSIEAALTAAAKTSAIACRSVPEETAKFFTDAAGSLLENGE--DPQEVVARCLAAISRRSSEVQSRSLLTGELGLVTVEMTNNRDRPVSPGDVMFTVSKLSRMSQRGDGNLTFDSDVGKIHSDFETGSAIFDMGVEDAKKLVEFSKDIDAGGAVFSI 688          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE98_ECTSI0.000e+083.59RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A836CKS6_9STRA6.010e-20959.20RNA helicase (Fragment) n=1 Tax=Tribonema minus Ta... [more]
A0A835ZP19_9STRA4.380e-17358.85RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2V2B9_9STRA8.740e-15948.70RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonic... [more]
A0A7S2DBW6_9STRA1.490e-15546.54RNA helicase (Fragment) n=1 Tax=Dictyocha speculum... [more]
A0A1Z5KKE6_FISSO4.060e-14345.62RNA helicase n=1 Tax=Fistulifera solaris TaxID=151... [more]
B7G0R3_PHATC3.330e-14243.28RNA helicase n=1 Tax=Phaeodactylum tricornutum (st... [more]
A0A7S3ZWQ0_9STRA3.660e-14143.09RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=... [more]
A0A7S3V908_9STRA1.110e-13944.26RNA helicase n=1 Tax=Chaetoceros debilis TaxID=122... [more]
A0A7S4R924_9STRA1.470e-13945.25RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 882..892
score: 43.18
coord: 795..806
score: 41.67
coord: 854..869
score: 42.97
coord: 916..934
score: 36.18
NoneNo IPR availableGENE3D3.40.50.300coord: 246..469
e-value: 3.7E-68
score: 231.5
NoneNo IPR availableGENE3D3.40.50.300coord: 474..704
e-value: 1.9E-45
score: 157.3
NoneNo IPR availablePANTHERPTHR24031:SF346DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21coord: 255..810
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 255..810
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..934
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.729
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 520..601
e-value: 5.8E-28
score: 108.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 498..601
e-value: 1.7E-27
score: 96.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 495..644
score: 22.574
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 272..483
e-value: 2.2E-51
score: 186.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 284..466
score: 28.673
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 277..453
e-value: 1.9E-43
score: 148.3
IPR012562GUCTPFAMPF08152GUCTcoord: 696..791
e-value: 4.1E-12
score: 46.2
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 411..419
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 332..623

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:515932..524436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.920.1mRNA_C-linearis_contig104.920.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 515617..526370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.920.1 ID=prot_C-linearis_contig104.920.1|Name=mRNA_C-linearis_contig104.920.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=935bp
MTSQRSTTLAVLGLLAGFVNVDAFRLIPASPGAVSSSLARAQQQSAVASR
GASTRRTWRSAHGLTMSSPAVGNDLPATEELEDKPSRDSVMDELDAILGD
VKMDSTAKPASSAKNTAAVLGQDLDSLLGAPGAPPSAAATPATKQNSDVG
DLNLDDLLGPGANSAPPQRYSGGGTAGGGGAARAPPASRAQPAQGWGSPT
DGQAPPPQQRMSYSGEFGAASGRYGDMATAAASKVLKGDQLVSLVEVGDE
GACPVEEKDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTG
TGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYT
ELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKG
ALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPS
WVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDII
TYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIK
AFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRA
GRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVA
REQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARKTHVTR
RSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGKIAVAK
DPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVPGGGRFG
GGGRGGGRGGRGGRGRGGGGYRGGRSSYGGGGGGSYGGGGGYRGGGGGGG
GYRGGGGGGYRGGGGSSYGGGGSSYGGGGSSYGGGGSSYGGGGGRSSYGG
GGGGSYGGGGGSYRGGGSRGGGGSSYGGGGNSDW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR012562GUCT
IPR000629RNA-helicase_DEAD-box_CS
IPR027417P-loop_NTPase