prot_C-linearis_contig104.918.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.918.1
Unique Nameprot_C-linearis_contig104.918.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length246
Homology
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: D8LEA0_ECTSI (Thioredoxin-like_fold domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA0_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 5.960e-98
Identity = 150/225 (66.67%), Postives = 174/225 (77.33%), Query Frame = 0
Query:    6 RRGRNRALCAAAVLLGLLFFTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYS--DSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 228
            RR   R L   A+L GL   TILAAV VQSEP IPFD YGHV+  QG+ +A  KVEVYLDLACSDCAL WPV+ +VAEAYG + EFLYRLFPLPYH NAF AAKAAK + LYS    D  +ASFFT VF GQD ISND+TE +TQP+IE IL  WATS++G+S   F+ GM+D E +  TR QFKYGCLHGV GTPQV+IGG+LA GLDG+ATFQDWQD+L+PL+
Sbjct:   20 RRLSFRTLLGVALLFGLTL-TILAAVAVQSEPAIPFDGYGHVILRQGTLEAALKVEVYLDLACSDCALAWPVMNRVAEAYGDRTEFLYRLFPLPYHNNAFKAAKAAKTIQLYSRGSEDASVASFFTEVFIGQDEISNDSTELMTQPQIEDILESWATSSSGMSADNFHMGMADAEVEIQTRNQFKYGCLHGVDGTPQVYIGGILASGLDGDATFQDWQDILDPLL 243          
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A815YPJ9_9BILA (Hypothetical protein n=4 Tax=Rotaria TaxID=231623 RepID=A0A815YPJ9_9BILA)

HSP 1 Score: 130 bits (326), Expect = 3.840e-33
Identity = 73/210 (34.76%), Postives = 118/210 (56.19%), Query Frame = 0
Query:   22 LLFFTILAAVTVQSEPDIPF--DRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSD-NEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 228
            +L FT+L    + ++  IP   D YG      G  DA   +E++LD  C DC  +WP + QV +AYG +  F +  FPLPYH N+F A++   V+S  ++ + + I ++ T VF+ Q+   NDAT+++T P++   LA +      V++  F  GM++D+ +  TR  +KY C  GV GTP   I GV A   D   +  DW+ +++P++
Sbjct:    4 ILIFTLLVGF-ISAQAPIPTRPDGYG----VGGPADAHVVIEMFLDPLCPDCKASWPTVLQVIQAYGTKIHFRFHTFPLPYHTNSFVASQGVHVISNVTNRNLDSIFTYVTKVFENQETWYNDATKNMTMPQVVDSLAAFVAQLGLVTKAQFLAGMANDDINFETRVSWKYACSRGVVGTPTFLINGV-ATSADDSWSLADWKSVIDPIL 207          
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A194ANN1_PINFU (Thioredoxin-like_fold domain-containing protein n=1 Tax=Pinctada fucata TaxID=50426 RepID=A0A194ANN1_PINFU)

HSP 1 Score: 118 bits (295), Expect = 1.230e-28
Identity = 76/215 (35.35%), Postives = 112/215 (52.09%), Query Frame = 0
Query:   18 VLLGLLFFTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKV--EVYLDLACSDCALTWPVLTQVAEAYG-HQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLVG 229
            +LL +L  +  A V +  +P         + FT G+ DA A++  E ++   C D    +  L  VA  YG  +    Y LFPLPYHRNAF AAKA ++V  +++S NE   F   ++   D  SNDAT  +++ E+   LAD+ +    VS K F   MS D  +  TR ++KY C  G  GTP   +  VL    D + T  +W+ +L+PL+G
Sbjct:    5 LLLNVLVLSAFAQVPIPKQP---------LGFTYGNGDASAQIQLEAFMGPLCPDSKECFATLQNVASFYGPSRLRLRYHLFPLPYHRNAFIAAKATRIVDRFTNS-NETIDFMGTIYTNIDSFSNDATHGMSEAEVIQKLADYGSKMAKVSMKEFVDMMSSDTIEGDTRTEWKYTCSRGFSGTPTFTVNDVLVAA-DPKWTVSEWRQVLDPLLG 208          
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A5A7Q744_STRAF (Thioredoxin superfamily protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7Q744_STRAF)

HSP 1 Score: 112 bits (279), Expect = 1.010e-26
Identity = 57/169 (33.73%), Postives = 94/169 (55.62%), Query Frame = 0
Query:   60 VEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 228
            +E + D  C D   +WP L +V + YG + + + RLFPLPYH NAF A++A  +V+    + +       A F+ Q+  S ++T +L++  +   +  +++ A G S+ A  +G  +DE D LTR  FK G + GV+GTPQ F+ G +         +  W+ +L+PLV
Sbjct:   42 IEAFFDPVCPDSRNSWPPLKEVLKYYGDRVKLITRLFPLPYHANAFVASRAITIVNDVVSTSSAYL-LLEAFFNNQETFSGNSTFNLSRAVVTDRIVKFSSKAVGHSQSAIQSGFQNDETDYLTRVGFKQGGIRGVYGTPQFFVNGFIFAEPGSAQNYSTWRAVLDPLV 209          
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A2R6WDY7_MARPO (Thioredoxin-like_fold domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WDY7_MARPO)

HSP 1 Score: 111 bits (278), Expect = 2.190e-26
Identity = 67/209 (32.06%), Postives = 98/209 (46.89%), Query Frame = 0
Query:   22 LLFFTILAAVTVQSEPDIPFDRY--GHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 228
            L+F  +L +++V     IP   +  G  +  +  P+ V  +E ++D  C DC + WP +T+V   YG    F+   FP+P+H NAF AA+A  + S  + S          +F  QD   NDAT D T   + +   D A    G+    F  G +D   D  TR  FKYGC   V  TP   + G+     D   + +DW  LL+PL 
Sbjct:   11 LVFCLVLCSISVSLVAAIPIPAHYDGFGIPPRSIPEPVL-LEAFIDPICIDCKIAWPTVTKVLSIYGSSLSFIVHPFPVPFHHNAFFAARALHIASSLNSSST--FPLLELIFKKQDSFLNDATNDETPASVVSRFVDLAAEV-GLPADEFAAGFTDSNTDQATRISFKYGCARYVTSTPSFLLNGIYVSA-DETWSVEDWAKLLDPLT 214          
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: W4FQ48_9STRA (Thioredoxin-like_fold domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQ48_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.800e-26
Identity = 74/237 (31.22%), Postives = 118/237 (49.79%), Query Frame = 0
Query:   19 LLGLLF----FTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAY-GHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSA-----TGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLVGGPAARLKLNGTHNSVV 245
            ++GLLF    F +LA +   S  DIP    G   +  G P A  +++V++DL C      +P L Q+ +A+ G      +++ PLP+HRNAF AA++   V ++S        +   ++  QD++SN  T + T  ++   LA WA +A          K    G ++DE    TR  F+Y   HGV GTP  ++ GV     D   +F DW +++ PLV    A + L  T+N+ +
Sbjct:    1 MMGLLFRAAIFVVLAMLPSSSVGDIPTTTPGFT-YKDGLPQAPVQLQVFIDLLCPYSKAAYPALKQLGDAFEGKDFRLTFQVLPLPFHRNAFLAAQSTVSV-VHSVGVQSFVPWLETIYANQDKLSNTNTLNTTPNDLITQLASWAHAAFPSIDVASFRKTLLPGTAEDEK---TRQLFRYTLAHGVAGTPMYYLNGVHYNNADSAWSFNDWFNVINPLVQANKAAVPLPSTYNNPI 232          
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: W4FS09_9STRA (Thioredoxin-like_fold domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FS09_9STRA)

HSP 1 Score: 106 bits (264), Expect = 8.430e-24
Identity = 72/229 (31.44%), Postives = 113/229 (49.34%), Query Frame = 0
Query:   19 LLGLLF----FTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAY-GHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSA-----TGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLVGGPAARLKL 237
            ++GLLF    F +LA +   S  DIP    G   +  G P A  +++V++DL C      +P L Q+ +A+ G      +++ PLP+HRNAF AA++   V ++S        +   ++  QD++SN  T + T  ++   LA WA +A          K    G ++DE    TR  F+Y   HGV GTP  ++ GV     D   +F DW +++ PLV    A + L
Sbjct:    1 MMGLLFRAAIFVVLAMLPSSSVGDIPTTTPGFT-YKDGLPQAPVQLQVFIDLLCPYSKAAYPALKQLGDAFEGKDFRLTFQVLPLPFHRNAFLAAQSTVSV-VHSVGVQSFVPWLETIYANQDKLSNTNTLNTTPNDLITQLASWAHAAFPSIDVASFRKTLLPGTAEDEK---TRQLFRYTLAHGVAGTPMYYLNGVHYNNADSAWSFNDWFNVINPLVQANKAAVPL 224          
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A176WPY7_MARPO (Thioredoxin-like_fold domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WPY7_MARPO)

HSP 1 Score: 108 bits (269), Expect = 3.750e-23
Identity = 65/204 (31.86%), Postives = 96/204 (47.06%), Query Frame = 0
Query:   25 FTILAAVTVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 228
            F +L A+ + +     +D +G  +  +  P+ V  +E ++D  C DC + WP +T+V   YG    F+   FP+P+H NAF AA+A  + S  + S          +F  QD   NDAT D T   + +   D A    G+    F  G +D   D  TR  FKYGC   V  TP   + G+     D   + +DW  LL+PL 
Sbjct:  609 FLVLRAIPIPAH----YDGFG--IPPRSIPEPVL-LEAFIDPICIDCKIAWPTVTKVLSIYGSSLSFIVHPFPVPFHHNAFFAARALHIASSLNSSST--FPLLELIFKKQDSFLNDATNDETPASVVSRFVDLAAEV-GLPADEFAAGFTDSNTDQATRISFKYGCARYVTSTPSFLLNGIYVSA-DETWSVEDWAKLLDPLT 801          
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: A0A7S3H9Z6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9Z6_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.260e-21
Identity = 55/141 (39.01%), Postives = 81/141 (57.45%), Query Frame = 0
Query:   93 YRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEA-----DTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATFQDWQDLLEPLV 228
            YR+FPLPYH+ AF  +KAA++V    + +  + +FF   +  QD I N  T D T  ++  ++  WA   TGV+E+ +  GM+   +     +  TR+ +K  C+ GVF TP   I G+  GGLD   TF+DWQ  L+PLV
Sbjct:    2 YRVFPLPYHQQAFIVSKAAQLVQQLGNPE-AVFTFFDTAYANQDLIYNANTLDKTYNDVVKLVEPWAVQGTGVTEENYFIGMNSSTSVGNPIEMETRYMWKQVCIEGVFATPLFQIDGLKVGGLD---TFEDWQATLDPLV 138          
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Match: UPI00145888FB (uncharacterized protein LOC117332932 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145888FB)

HSP 1 Score: 99.4 bits (246), Expect = 1.810e-21
Identity = 68/209 (32.54%), Postives = 105/209 (50.24%), Query Frame = 0
Query:   25 FTILAAV-TVQSEPDIPFDRYGHVLFTQGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYG-HQAEFLYRLFPLPYHRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPEIEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQVFIGGVLAGGLDGEATF--QDWQDLLEPLVG 229
            F + A +  V  +  IP    G   +  G+  A  ++  +L   C D    +P L +VA+ YG  +   +  LFPLPYHRNAF AAK A++ ++ S S N   S+ TAV+      SND T D T+ +++ + A  A +   + +  FNT   D   +  TR  +KY    GV  TP   I  VL   +  E T+  +DW+ +++ L+G
Sbjct:    7 FVVFALIGAVYGQIPIPSKPLGFS-YGLGNKSAPIQLSTFLGPLCPDSQNAFPTLLKVADYYGPDRVRLITHLFPLPYHRNAFLAAKGAQITNVLS-SGNSTYSWMTAVYSNLAAFSNDVTHDKTEKQVQDMFASMAKTL-NLDQTKFNTMYKDSGIEEATRLDWKYTATRGVAWTPAFMINDVL---IQAEPTWTLEDWKKVIDSLLG 209          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA0_ECTSI5.960e-9866.67Thioredoxin-like_fold domain-containing protein n=... [more]
A0A815YPJ9_9BILA3.840e-3334.76Hypothetical protein n=4 Tax=Rotaria TaxID=231623 ... [more]
A0A194ANN1_PINFU1.230e-2835.35Thioredoxin-like_fold domain-containing protein n=... [more]
A0A5A7Q744_STRAF1.010e-2633.73Thioredoxin superfamily protein n=1 Tax=Striga asi... [more]
A0A2R6WDY7_MARPO2.190e-2632.06Thioredoxin-like_fold domain-containing protein n=... [more]
W4FQ48_9STRA3.800e-2631.22Thioredoxin-like_fold domain-containing protein n=... [more]
W4FS09_9STRA8.430e-2431.44Thioredoxin-like_fold domain-containing protein n=... [more]
A0A176WPY7_MARPO3.750e-2331.86Thioredoxin-like_fold domain-containing protein n=... [more]
A0A7S3H9Z6_9STRA1.260e-2139.01Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI00145888FB1.810e-2132.54uncharacterized protein LOC117332932 n=1 Tax=Pecte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 47..224
e-value: 1.8E-34
score: 121.3
NoneNo IPR availablePANTHERPTHR33875FAMILY NOT NAMEDcoord: 17..232
NoneNo IPR availablePANTHERPTHR33875:SF2coord: 17..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..35
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..29
score: 0.608
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
IPR012336Thioredoxin-like foldPFAMPF13462Thioredoxin_4coord: 50..225
e-value: 1.8E-13
score: 51.0
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 50..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:504398..508747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.918.1mRNA_C-linearis_contig104.918.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 504258..510959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.918.1 ID=prot_C-linearis_contig104.918.1|Name=mRNA_C-linearis_contig104.918.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=246bp
MPRPCRRGRNRALCAAAVLLGLLFFTILAAVTVQSEPDIPFDRYGHVLFT
QGSPDAVAKVEVYLDLACSDCALTWPVLTQVAEAYGHQAEFLYRLFPLPY
HRNAFTAAKAAKVVSLYSDSDNEIASFFTAVFDGQDRISNDATEDLTQPE
IEAILADWATSATGVSEKAFNTGMSDDEADTLTRFQFKYGCLHGVFGTPQ
VFIGGVLAGGLDGEATFQDWQDLLEPLVGGPAARLKLNGTHNSVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012336Thioredoxin-like_fold
IPR036249Thioredoxin-like_sf