prot_C-linearis_contig104.917.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.917.1
Unique Nameprot_C-linearis_contig104.917.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length251
Homology
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: D8LE66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE66_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 3.160e-98
Identity = 170/252 (67.46%), Postives = 186/252 (73.81%), Query Frame = 0
Query:    1 MSSKWALDDDDGKDEGGNGSPLTPNSPPSEQKEVA--GGRRSRRPRPGQADAETADSSKNGVDGPPVKTVAGGWGLDASGLINSEAQSKSTTHMVETQQKQIEGGSNRATRRNHFDNEETEILVIPDLEDEGEEDIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNAEKRVTLNAEGGAGSDPSSSIALKEGGSGSQMQSGHRSSRALVV 250
            MSSKWA DDD G+D+ GNGSPLTPNSPP E K+    GGRRSRRPRPG+ D + A + K   D PPVKTVAGGW LD +G  +SEAQ            K IEGGSNRA RRNHFDNEETEILVIPDLEDEGEED+  KVAAAP+NTTRRVPSLRELDEDLK+AIPS ADGLDMSLLTKTLVP EMLEEDDSPW+FD+LLQSVTQEFNAEKR+   A+ G   D S+                 RSSRALV 
Sbjct:    1 MSSKWASDDD-GQDDAGNGSPLTPNSPPYEHKDSGSGGGRRSRRPRPGRDDIDAAAAEK---DRPPVKTVAGGWELDGAGSASSEAQKXXXXXXXXXXXKPIEGGSNRANRRNHFDNEETEILVIPDLEDEGEEDVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSGADGLDMSLLTKTLVPSEMLEEDDSPWEFDSLLQSVTQEFNAEKRLAFRAKLGTDDDGSTXXXXXXXXXXXXXXXXRRSSRALVA 248          
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: A0A7S2Y124_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y124_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.360e-33
Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 0
Query:   51 ETADSSKNGVDGPPVKTVAGGWGLDASGLINSEAQSKSTTHMVETQQKQIEGGSNRATRRNHFDNEETEILVIPDLEDEGEEDIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNAEKRVTLNAE 216
            + A   K+  D     +V  GWG   S    +EA + ST+   E  + + +   N   RR  +D+E TE+++IPD+++E EEDI  KVAAAP+NT +RV SLREL+ DLK  + SSA+G+D+SLLT  LVP + L+E+D  W FD LLQ VTQEFNAE     N E
Sbjct:   29 DDAAGGKDDGDDAAKPSVQQGWG---SPNAKTEAGADSTSANNENDEAEKK---NEGRRRARWDDEATELIIIPDMDEEAEEDITTKVAAAPRNTAKRVQSLRELEHDLKMTVTSSANGIDLSLLTAHLVPAQQLQEEDITWHFDALLQEVTQEFNAEAEKRPNQE 188          
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: A0A836CKA7_9STRA (Intraflagellar transport protein 43-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKA7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.210e-32
Identity = 66/115 (57.39%), Postives = 86/115 (74.78%), Query Frame = 0
Query:  119 EILVIPDLEDEGEEDIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNAEKRVTL-NAEGGAGSDPSSSIALKEG 232
            ++LVIPDLE+ G +D    VAAAP+NT RRVPSLRELD  ++  IPS+A+GLDMS+LTKTLVPP +L+E DS W+FDTLLQ VTQ +NA ++  L  A     + P+++ ALK G
Sbjct:   21 DVLVIPDLEEGGADDFAHTVAAAPRNTARRVPSLRELDHAIRFTIPSAAEGLDMSMLTKTLVPPHVLQEPDSLWEFDTLLQEVTQAYNATRKQKLATATAPFAAAPAAAAALKAG 135          
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: A0A7S3YC96_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC96_HETAK)

HSP 1 Score: 123 bits (308), Expect = 3.690e-31
Identity = 84/180 (46.67%), Postives = 106/180 (58.89%), Query Frame = 0
Query:   50 AETADSSKNGVDGPPVK--TVAGGWG-----LDASGLINSEAQSKSTTHMVETQQKQIEGGSNRATRRNHFDNE-ETEILVIPDLEDEGEEDIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNA--EKRVTLNAEGGA 219
            A+     K+  DG  V    V  GWG      D+      +A++K  T   E  +K          RR  +D+E  TEIL+IPDLE+E EEDI  +VAAAP+NT +RV SLREL+ DLK  + SS +G+D+S LT  LVP EMLEE+D  WDFD+LLQ VTQE+NA  EKR    A   A
Sbjct:   23 AKPRREGKDTDDGKDVNKPNVQQGWGSPVGTTDSLKKEEPKAEAKKDTEADEDDKKD--------RRRARWDDEGATEILLIPDLEEEAEEDITTQVAAAPRNTAKRVQSLRELENDLKMTVSSSENGIDLSALTAHLVPAEMLEEEDVLWDFDSLLQEVTQEYNARAEKRPEATAAAAA 194          
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: A0A7S2SRC7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRC7_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.470e-26
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 0
Query:  106 RATRRN--HFDNEETEILVIPDLEDEGE--EDIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNAE--KRVTLNAEG 217
            R  R+N    ++E TEIL+IPDL+DE    EDI  +VAAAP+N  RRV SL++LD D+K+ +PS A G+D+S+LT +LVPP M+ EDD  W+FD+LLQ VT EFNAE  KR    A G
Sbjct:  105 RGRRKNLRDMEDEATEILMIPDLDDEENDAEDITTQVAAAPRNLARRVQSLQQLDHDIKYTVPSGA-GIDLSILTSSLVPPTMVREDDVLWEFDSLLQEVTHEFNAEVEKRAEDEAAG 221          
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: A0A7S2D6Z0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6Z0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.560e-26
Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 0
Query:   71 GWGLDASGLINSEAQSKSTTHMVETQQKQIEGGSNRATRRNHF-----DNEETEILVIPDLEDEGEEDIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNAE 208
            GWG    G    EA+ K      + +++ +        RR        DN+   +++IPDL++E  ED+  +VA APKN  RRV SL++LD ++K+ +PS   GLD+S+LT +LVPPEM++E D+ W+FDTLLQ VTQEF AE
Sbjct:  115 GWGSPTKG---GEAEGKDEGKDADAEEETVTAAEEPTRRRKGLRDHEEDNDADVVMIIPDLDEEEAEDLTAQVAVAPKNLARRVQSLQQLDHEIKYTLPSGG-GLDLSILTASLVPPEMVQEADATWEFDTLLQEVTQEFTAE 253          
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: A0A1V9YYR3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYR3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.090e-23
Identity = 69/168 (41.07%), Postives = 95/168 (56.55%), Query Frame = 0
Query:   58 NGVDGPPVKTVAGGWGLDASGLINSEAQSKS--TTHMVETQQ----KQIEGGSNRATRRNHFDN--EETEILVIPDLEDEGEE-DIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNAEKRVTLNAE 216
            N  + P V     GWG++ SG   + A S S       ET++    K  + G     +  HFD+  E TEI+ IPDLE+E  E DI  ++A AP+NTTR V SL+EL+ D+K+A+PS+   +D+ LLT  L P   + EDD PWDFD+LL+ V QE   E     N +
Sbjct:   35 NADEKPMVTKRMSGWGVEGSGEATAVASSSSGGDQEPAETKRGRRRKDEKPGETAKPKNRHFDDDGEATEIVEIPDLEEEEREPDITTQIADAPRNTTRVVQSLKELERDVKYALPSTG-SIDLQLLTSFLCPQRAVIEDDDPWDFDSLLRDVFQEVQKELEEKENQD 201          
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: A0A1W0A1C3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1C3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.860e-23
Identity = 69/173 (39.88%), Postives = 104/173 (60.12%), Query Frame = 0
Query:   58 NGVDGPPVKTVAGGWGL--DASGL--INSEAQSKSTTHMVETQQKQIEGGSNRATRRNHFDNE--ETEILVIPDLEDEGE-EDIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNAE-----KRVTLNAEGG 218
            NG + P V    GGWG+  D++G    N+  Q  + T     ++++ +G + ++  R HFD++   TEI+ IPDLE+E    DI  ++A AP+NTTR V SL+EL+ D+K+A+PS+   +D+ LLT  L P   + E+D PWDFD+LL+ V QE   E      +  L+A GG
Sbjct:   30 NGDEKPVVAKRMGGWGVEGDSAGANPANNTDQEPAETKRGRRRKEESKGETTKSKNR-HFDDDGDTTEIIEIPDLEEEERVPDITTQIAEAPRNTTRVVQSLKELERDVKYALPSTG-NVDLQLLTSFLCPQRAVMEEDEPWDFDSLLRDVFQEVQKEIDEKENQDELDANGG 200          
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: A0A8K1CAM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAM6_PYTOL)

HSP 1 Score: 95.1 bits (235), Expect = 3.980e-20
Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 0
Query:  104 SNRATRRNHFDN--EETEILVIPDLEDEG-EEDIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSS-ADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNA---EKRVTLNAEG 217
            S+   +  HFD+  E T+I+ IPDLE+E  E+DI +++A APKNTTR V SL+ELD D+K ++P++ A G+D+SLLT  L P + + E D  W+FD LL  V+QE      EK   L A+G
Sbjct:   99 SDSKAKNRHFDDDQESTDIVEIPDLEEEEREQDITMQIADAPKNTTRSVQSLKELDRDIKFSLPTTVAFGVDLSLLTSCLCPEKAVIESDETWNFDGLLNEVSQEMQKDLDEKEEMLKADG 219          
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Match: A0A024TT05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TT05_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.330e-20
Identity = 51/111 (45.95%), Postives = 78/111 (70.27%), Query Frame = 0
Query:  109 RRNHFDN--EETEILVIPDLEDEGEE-DIVLKVAAAPKNTTRRVPSLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQSVTQEFNAEKRVTLNAE 216
            +  HFD+  E TE++ IPDLE+E  E DI  ++A AP+NTTR V SL+EL+ D+K+++P++A G+D+++LT  L P + ++EDD  WDFD+LL+ V Q+   E+    N E
Sbjct:   91 KNKHFDDDGEATELMEIPDLEEEEREPDITTQIADAPRNTTRVVQSLKELERDVKYSLPTTA-GVDLTILTSFLCPQKAVQEDDDAWDFDSLLRDVFQDVQKEQEEKDNQE 200          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE66_ECTSI3.160e-9867.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2Y124_9STRA2.360e-3346.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CKA7_9STRA2.210e-3257.39Intraflagellar transport protein 43-domain-contain... [more]
A0A7S3YC96_HETAK3.690e-3146.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SRC7_9STRA1.470e-2655.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2D6Z0_9STRA2.560e-2643.36Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1V9YYR3_9STRA1.090e-2341.07Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1W0A1C3_9STRA4.860e-2339.88Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A8K1CAM6_PYTOL3.980e-2047.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TT05_9STRA5.330e-2045.95Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029302Intraflagellar transport protein 43PFAMPF15305IFT43coord: 82..210
e-value: 4.8E-36
score: 123.9
IPR029302Intraflagellar transport protein 43PANTHERPTHR33724FAMILY NOT NAMEDcoord: 29..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:498435..500459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.917.1mRNA_C-linearis_contig104.917.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 498435..500459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.917.1 ID=prot_C-linearis_contig104.917.1|Name=mRNA_C-linearis_contig104.917.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=251bp
MSSKWALDDDDGKDEGGNGSPLTPNSPPSEQKEVAGGRRSRRPRPGQADA
ETADSSKNGVDGPPVKTVAGGWGLDASGLINSEAQSKSTTHMVETQQKQI
EGGSNRATRRNHFDNEETEILVIPDLEDEGEEDIVLKVAAAPKNTTRRVP
SLRELDEDLKHAIPSSADGLDMSLLTKTLVPPEMLEEDDSPWDFDTLLQS
VTQEFNAEKRVTLNAEGGAGSDPSSSIALKEGGSGSQMQSGHRSSRALVV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029302IFT43