prot_C-linearis_contig104.913.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.913.1
Unique Nameprot_C-linearis_contig104.913.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length2482
Homology
BLAST of mRNA_C-linearis_contig104.913.1 vs. uniprot
Match: D8LEF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF4_ECTSI)

HSP 1 Score: 717 bits (1850), Expect = 7.460e-215
Identity = 940/2292 (41.01%), Postives = 1077/2292 (46.99%), Query Frame = 0
Query:    1 MEEGGPSMPAG-SSGRGQILPNPATDSFKDDIQAIGRAVERLRDGFVGADSSSPKPTPTHDSSQ-SGGFVSSSYASGGGCRSAGKRGGAGSGGLPATILTERSQKAYSSLSSARGGGSGSLVGGGTTPVESSMGNSNGRLSLRELRSADEARKFYADERARATVDTAGDHRDAAAVGMALASGEKAPTSI-----------GSSTGSRNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDTPRGAPEE----GQLRLQGD-QGSLLTSDGETPAAG-----SPGRRG---------GEGWKHEVRDRSQKEACSNGRNGSCGSAAAAREQGSEEEGSAGEAGGVVPAESGSLFELRDALRSREKELLRLERDVSVVASSAGGFNRLAASLGSSNTNNAGTGQRRSFAFDH---------------------RGDAEEDGDRSGSRSGAPGASYLFSSGGLGGADGASGSGSGLLLPRHSVESSLAGTSASHLTTASMAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAPVAVSGSPLVASAHEGLRQMRVMLEQRAVEAERAKDDSKNMTASLNDVSARLRRSERRRAAQATELAEARAAADAAKSELSRALARHRAKEKRXXXXXXXXXXXDKKKESEAAAREAREKKAVSDGFLADPARQRQLFERDAEISRLRDRLEAAAGELSEEQGTTASLRTRLESSEREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTAE--EEGRRHAREATRARESLRVERGGKARLALELEAAVRERTQAVEKLAAAEAEAGRLH-VKLSAASTAAEDIXXXXXXXXXXXXXXXXXXXXXANLTAALVLAREGQEAERGRFDRESKRAAALGEELVASEARRKVQEEEVALVRKQVSRLDAKIEEDMIREKAKSDATAEATAAGAERESDSLRASL--------------------------------RQTEAELLASRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMAAQASRQDKDTLKRGLVASQTACAELRAERSRLLSELEHAASSAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLKRQAE-VSEREHRTSVVVAGQVSHAARGRAXXXXXXXXGDEE------------RARLQEALRGSCRVMGRVATALSAAADDGTGSPRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAFSVDGH-SGAGDGGDGGHRRYVVGSSFGDSSDGGDEGSTGDEARRVVSRSEVREVSERLRFEASRLLGVRADEQRAAEDKKARLRQDLRDSESREAEAAARLEESRELSREQTGFVEGVWKERRRLESELDDRREEVDRLRASEDAARAAAAVLDGKVEDMSAALRQEKARAKREAEAAVAAEARDAVEALRRQLDDLRKEVDRTKSDQLDDGGGGVRGRGSNPDGAASGLPAADGAGQPRGVRRKGESSAAAAVGGVVASPTSPPSLAVLEAEFQRLRAKYEKAKGRIVALEELVAASRRVSAQARREFQGALEALKLSQELLLRIHRQRQGHHHGTDTNNV-----PATASDPSNT-TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGVEARAS-STDAHVHELAAQASKLRGMSGNVKRLLEIAAGEVQGALEDTRGSLGVAAAXXXXXXXXVAGTQTHQESGGPTKEEVDALKQQLRDATAAARALEVDKSRLDGELGTAVGELARVQGLLREKAAEALVLEAQVARLEAEGRETREALSAA-DDRLAGTEATEAQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVXXXXXXXSRSQERARLAAEASAAELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEAELDRQVKITGAARVATRAAEGAAAAAHAREGMGRERRELGEKSGRLEGPVQQQEVSRLKESLEREAERRGQLEKECKVLAARATDLEAALISASSEVRKAAKLAAERGARFERDATALSEETARLK----AXXQXXXXXXXXXXXXXXXXXXXXXXXXXAVAVAEAAERARREGTKDEQXXXXXXXXXXXRDCAALRKEMSETTGTLEAETTLRARAAQELSAHRRRVEELEAALEREKATARAASEVARKAASDSPMSQLQAEMRSVISSLE 2178
            MEE  P +P+  ++G G    +P  DSFKDDIQAIGRAVERLRDGF G DSSSP P P HDS+Q  GG  SS  ASG G  S     G G GG P   L   S+     L  AR G SG    G T+ +E +   S+GRLSLRELRSAD++R  Y+DERAR   D AGD    A    A   GE A T             G S+GS +S                                       D    GA  E    G LRL+GD + SL T+   T +A      SP  R          G+G     R        ++  +G  G+A A  E G               AESG LFELRDALRSRE++LLRL+RDVSVVA+SA GF  L+ASLGS N   +      SF+F                        G A   G   GSR+G  G   +          GA G   G+LL R   +S+L GT+ S  T A+                     XXXXXX          G A +A SGSPLVASAHEGL++MR +LEQRA+E  RA DDSK M  SLNDVSARLRRSER+R AQA ELA+                         XXXXXXXXXXX  K +   AAR          G LA+ A++           RLRDRLE A GE                +S++E                    XXXXXXXXXXXXXXXX          +AE                                               A AEAEAGRLH V+    S+ AE                       ANLTAALVLAREGQEAERGRFDRESKRAAALGEELVASEARRKVQEEE++LVRKQVSRLDAKIE DM R KA SDATA ATAAGAERE++SLRAS                                 R+ EAEL AS +   XXXX                                        AA+A++ DKDT                      LSELEHAA+SAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                     RLKR+ + VS+RE   +    G V  +AR +         G ++            R  LQEALR SC VM R+A+ALSAAA D   S R G                 XXXXXXXXXXXXXXXXXXXXXXXXXXXX         RAFSVD + SG GD         +    FGD ++ G EG    + RRVVSR+EVREV+ERLRFEA+RLLGVR +E++AA D  A LR+DLRDSESREAE  ARLEESRELSREQTGFVEGVWKER RL           +RLRASEDAAR AA VLDGKV D+SAALRQE+ARAKREAEAAVAAEARDA+EALR+QLDDLRK                                                                       E EFQRLRAKYEKAKGRIVALEELVAASRRVSAQARREF+GALEALKLSQELLLRIHRQRQ +     T+       PA A  P +                                 RP   A +S STDAHVHELAAQASKLRGMSGNVKRLL++AAGEVQGALEDTR SLGVA A          GTQT +   GPT+ EV+ L+QQ+    A  +A E +K RL GEL  AVGEL ++QGLL +K +EA+VLEA VARLE E  E REA SAA +D LA     EA L                                 EV       +RSQERARLA     AELR                                                          LEAEL RQ K   AARV  +  E               R  L  +SGR E                RE ERR ++E+ECKVL AR  DLEAAL   ++E++KAA    E GA  ER+   L EE  RL+    A  +             X           A  +A+A E+   +G  +E            RD AALRKE+SE+T                         +LEAALE  KAT           A  S MS L+AEMRSVI+SL+
Sbjct:    1 MEEDRPWVPSSDNAGSGAGRASPLNDSFKDDIQAIGRAVERLRDGFAGTDSSSPAPAPGHDSAQWDGGLSSSMLASGPGDESGRPSSGDGVGGQP--TLGNNSRPLVRELLPARAGVSGIFAEGDTSVLERTR-YSDGRLSLRELRSADKSRTHYSDERARPRPDDAGDQSTTAVAAAAEGGGEMAGTGTQVSDQEGLFNKGGSSGSTHSGSTSRRRANDVGGPSSPGGAQREQSLVTPVLTPDVGEKDDGRGPGARGETQAVGLLRLRGDREPSLPTAVSRTASAEPLLLLSPLIRSSTSASVLGSGDGAWESFRREHSASGDNSSSSGDAGTAVAGTEDGMP-----AAXXXXXXAESGPLFELRDALRSREEDLLRLKRDVSVVATSARGFRHLSASLGSGNVERSS-----SFSFQRSRGHGKDASGANTDDSDLPSGNGSAFRGGGSDGSRAGGAGVDKINEEAFRPHHGGAVG---GVLLRRQPADSALPGTALSFRTAATPG------RPSDNELASSRRLXXXXXXQQGSTATVSKGNAIIAASGSPLVASAHEGLQRMRAVLEQRALEVGRAHDDSKEMANSLNDVSARLRRSERKRNAQAAELAKX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSKDATAARXXXXXXXXXXGSLAETAQRXXXX--XXXXXRLRDRLETATGEXXXXXXXXXXXXXXXXASDKETRRARERAAAAEEEAGAATAXXXXXXXXXXXXXXXXAERAQREAEASAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXAEAEAGRLHSVRRERDSSVAE----------------------VANLTAALVLAREGQEAERGRFDRESKRAAALGEELVASEARRKVQEEEISLVRKQVSRLDAKIEGDMSRVKANSDATARATAAGAEREANSLRASXXXXXXXXXXXXXXXXXXXXNADASLKAELAAAREAEAELAASEARAKXXXXR---------------------------------------AARAAQLDKDTXXXXXXXXXXXXXXXXXXXXXXLSELEHAATSAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFVRARKDLEGRLALAVAEAAESRAEAQ------------------------RLKRKLQAVSDREDGGTPAGLG-VGFSARTKRRNGGGGTRGKDDDYLFGLDGDRPHREGLQEALRESCGVMERIASALSAAAADRRTSRRPGSDGGSELDDPRWAFGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RAFSVDSNRSGVGD-------ADLRQDGFGDCAESGGEGH---DLRRVVSRAEVREVAERLRFEAARLLGVRKEERKAAGDTVASLRRDLRDSESREAEVTARLEESRELSREQTGFVEGVWKERHRLXXXXXXXXXXXERLRASEDAARTAATVLDGKVADLSAALRQEQARAKREAEAAVAAEARDAMEALRQQLDDLRK-----------------------------------------------------------------------EGEFQRLRAKYEKAKGRIVALEELVAASRRVSAQARREFKGALEALKLSQELLLRIHRQRQNNAVADPTDTATPTTHPAAAPAPKHHHQPDAATRESHPGAPDETPSAAPADLAATAGERPTSAATSSLSTDAHVHELAAQASKLRGMSGNVKRLLQLAAGEVQGALEDTRDSLGVAGAAAA-----TVGTQTAEGLDGPTRGEVECLEQQVVRMKAEGQAREAEKLRLSGELSAAVGELTKIQGLLEDKMSEAVVLEAHVARLETERNEAREAASAAANDGLA---EAEASLSDTQARLEAALATQRELRSRCAELSLASGAFASEVAKQKEERARSQERARLAT----AELRDLSAKFSRASKTAAADAAAERDRLERELVATRAEARDIDTDVAQVLDALASSEKERRRLEAELHRQTK---AARVQRQQGE---------------REALEVESGRKE----------------RETERREKVERECKVLEARTGDLEAAL---AAELKKAA----ETGAVHEREVAGLREEATRLRESLQAEMERERGKWQAEQKAMXEEIMLAREDDKASWIAKATEQGYEKGKAEEHHRTARSREREQRDLAALRKELSESTXXXXXXXXXXXXXXXXXXXXXXXXXQLEAALE--KATG----------ADRSSMSHLKAEMRSVITSLD 2019          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEF4_ECTSI7.460e-21541.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 839..859
NoneNo IPR availableCOILSCoilCoilcoord: 1305..1332
NoneNo IPR availableCOILSCoilCoilcoord: 1075..1109
NoneNo IPR availableCOILSCoilCoilcoord: 1700..1720
NoneNo IPR availableCOILSCoilCoilcoord: 1354..1374
NoneNo IPR availableCOILSCoilCoilcoord: 1964..1998
NoneNo IPR availableCOILSCoilCoilcoord: 1499..1526
NoneNo IPR availableCOILSCoilCoilcoord: 1393..1439
NoneNo IPR availableCOILSCoilCoilcoord: 508..535
NoneNo IPR availableCOILSCoilCoilcoord: 1837..1889
NoneNo IPR availableCOILSCoilCoilcoord: 546..614
NoneNo IPR availableCOILSCoilCoilcoord: 929..956
NoneNo IPR availableCOILSCoilCoilcoord: 752..772
NoneNo IPR availableCOILSCoilCoilcoord: 2119..2153
NoneNo IPR availableCOILSCoilCoilcoord: 638..723
NoneNo IPR availableCOILSCoilCoilcoord: 893..913
NoneNo IPR availableCOILSCoilCoilcoord: 783..817
NoneNo IPR availableCOILSCoilCoilcoord: 1742..1776
NoneNo IPR availableCOILSCoilCoilcoord: 331..351
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 1301..2187
coord: 475..1106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:472069..484443 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.913.1mRNA_C-linearis_contig104.913.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 472041..485351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.913.1 ID=prot_C-linearis_contig104.913.1|Name=mRNA_C-linearis_contig104.913.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2482bp
MEEGGPSMPAGSSGRGQILPNPATDSFKDDIQAIGRAVERLRDGFVGADS
SSPKPTPTHDSSQSGGFVSSSYASGGGCRSAGKRGGAGSGGLPATILTER
SQKAYSSLSSARGGGSGSLVGGGTTPVESSMGNSNGRLSLRELRSADEAR
KFYADERARATVDTAGDHRDAAAVGMALASGEKAPTSIGSSTGSRNSSSK
RRGHRQAGNGGRAASSDERRGARAAAAVAGGGRRRHDDTPRGAPEEGQLR
LQGDQGSLLTSDGETPAAGSPGRRGGEGWKHEVRDRSQKEACSNGRNGSC
GSAAAAREQGSEEEGSAGEAGGVVPAESGSLFELRDALRSREKELLRLER
DVSVVASSAGGFNRLAASLGSSNTNNAGTGQRRSFAFDHRGDAEEDGDRS
GSRSGAPGASYLFSSGGLGGADGASGSGSGLLLPRHSVESSLAGTSASHL
TTASMAPPPATDSPRRIMHPPPPRRRQQPQQQQQLVAAASGGTAPVAVSG
SPLVASAHEGLRQMRVMLEQRAVEAERAKDDSKNMTASLNDVSARLRRSE
RRRAAQATELAEARAAADAAKSELSRALARHRAKEKRAAAEKAAAAQQDK
KKESEAAAREAREKKAVSDGFLADPARQRQLFERDAEISRLRDRLEAAAG
ELSEEQGTTASLRTRLESSEREARRERERAASAEDEAEVAAAAQATRAAE
QARKEAAAAAAAAAAELRTAEEEGRRHAREATRARESLRVERGGKARLAL
ELEAAVRERTQAVEKLAAAEAEAGRLHVKLSAASTAAEDIQTAQRERDAA
KENLRGAVAELANLTAALVLAREGQEAERGRFDRESKRAAALGEELVASE
ARRKVQEEEVALVRKQVSRLDAKIEEDMIREKAKSDATAEATAAGAERES
DSLRASLRQTEAELLASRSRERHAAGAADASLKRELAAAKDTIERTEEAL
AATLERARAAEGGAEMAAQASRQDKDTLKRGLVASQTACAELRAERSRLL
SELEHAASSAAVAAATAEAEASLGSASSFSSPTDVGRGDGGGRGGRRGRG
GDDASTAVARAVETAAAAATLHRTRTDLEGRLALALAEAAEARAETQRLK
RQAEVSEREHRTSVVVAGQVSHAARGRAGAGGGGSGGDEERARLQEALRG
SCRVMGRVATALSAAADDGTGSPRHGGGGSELDDRRWAAGGEKRWRRTTG
SAGAGRNDSLAAGALTSRSSGRRPGSRRRRRAFSVDGHSGAGDGGDGGHR
RYVVGSSFGDSSDGGDEGSTGDEARRVVSRSEVREVSERLRFEASRLLGV
RADEQRAAEDKKARLRQDLRDSESREAEAAARLEESRELSREQTGFVEGV
WKERRRLESELDDRREEVDRLRASEDAARAAAAVLDGKVEDMSAALRQEK
ARAKREAEAAVAAEARDAVEALRRQLDDLRKEVDRTKSDQLDDGGGGVRG
RGSNPDGAASGLPAADGAGQPRGVRRKGESSAAAAVGGVVASPTSPPSLA
VLEAEFQRLRAKYEKAKGRIVALEELVAASRRVSAQARREFQGALEALKL
SQELLLRIHRQRQGHHHGTDTNNVPATASDPSNTTAAATCTEAQLRQRAT
ATATAAAATAEEEEQRPGVEARASSTDAHVHELAAQASKLRGMSGNVKRL
LEIAAGEVQGALEDTRGSLGVAAAAAAAAATAVAGTQTHQESGGPTKEEV
DALKQQLRDATAAARALEVDKSRLDGELGTAVGELARVQGLLREKAAEAL
VLEAQVARLEAEGRETREALSAADDRLAGTEATEAQLSETRACLDAAHSA
QAELRGRCAELSLASGAFAAEVAKQKEERSRSQERARLAAEASAAELRER
NAELSRASEAATSEAAAERARLEKALQATQAEAREIDSDVAQVLDALAAS
EKGRRRLEAELDRQVKITGAARVATRAAEGAAAAAHAREGMGRERRELGE
KSGRLEGPVQQQEVSRLKESLEREAERRGQLEKECKVLAARATDLEAALI
SASSEVRKAAKLAAERGARFERDATALSEETARLKAALQEKTAATEAETR
SAVEAVRREHREAVAVAVAEAAERARREGTKDEQERTAEAREREKRDCAA
LRKEMSETTGTLEAETTLRARAAQELSAHRRRVEELEAALEREKATARAA
SEVARKAASDSPMSQLQAEMRSVISSLEPRVEKSEEEGLEAGTGRTHRRR
RQELDQEDSGGMRREGAREGGEEVARNADDRRAAGQEQKDRLSGARRGLA
VVRQGDRRDETAHANVVVGDKSGVVGDTPQPACPRRRSNAEVRHNEIHLM
GGVTPLAGPSSTSFSGAGPTAAASVAASPNARRGGNEVAVPIGQAAPVTA
APAPAPAPGASAPEQAAAVPALPLIDILPGGSGRVGTVNGNNEEDDDVSL
SSVLSGVSSTTRTSGMSSSFTSAALPPQPRRGSVVVRGDWKAGQREAFSE
LDRKASASASPDDVGVGGGGGGGGAFAVGRP*
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