prot_C-linearis_contig104.911.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.911.1
Unique Nameprot_C-linearis_contig104.911.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length83
Homology
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: D8LEF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF6_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 9.040e-51
Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    1 MGYNELGNDWQHSLVLATGSADGSIHVFDLSKGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIWEPNRKRNTRK 82
            MGY +LGNDWQHSLVLATGSADGSIHVFDLSKGQGDE+QTL GHRDRVYSADFHPTEPKLVS SADKTV IWEPNRKRN+RK
Sbjct:    1 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLLGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 82          
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 5.850e-46
Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    1 MGYNELGNDWQHSLVLATGSADGSIHVFDLSKGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIWEPNRKRNTRK 82
            MGY +LGNDWQHSLVLATGSADGSIHVFDLSKGQGDE+QTLRGHRDRVYS DFHPTEPKLVS SADKTV IWEPNRKRN+RK
Sbjct:  520 MGYKDLGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSTDFHPTEPKLVSSSADKTVLIWEPNRKRNSRK 601          
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: A0A835Z281_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z281_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.860e-35
Identity = 56/84 (66.67%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    1 MGYNELGNDWQHSLVLATGSADGSIHVFDLSKGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIWEPNR--KRNTRK 82
            +GY + G DW HSLVLATGSADG+I+ FD+SKG+G ++QTLRGH DRVY+  FHPTEP+LVS SAD+TVRIW P++  +RN RK
Sbjct:   41 IGYEDSGKDWAHSLVLATGSADGNIYTFDMSKGEGGDLQTLRGHNDRVYAVHFHPTEPRLVSGSADQTVRIWGPSKGGRRNGRK 124          
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: A0A8J4PPE8_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PPE8_9MYCE)

HSP 1 Score: 89.0 bits (219), Expect = 7.660e-19
Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    8 NDWQHSLVLATGSADGSIHVFD--LSKGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIWEPNRK 77
            ND   S++LATGS+D + ++FD  LSK  G  +Q L GH DRVYS  FHP+EP L SCSAD T+R+W P +K
Sbjct:  446 NDINQSVLLATGSSDYNAYIFDIGLSKQSGRLLQKLEGHTDRVYSVKFHPSEPILASCSADSTIRLWTPKKK 517          
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: R7QRT1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRT1_CHOCR)

HSP 1 Score: 87.8 bits (216), Expect = 2.020e-18
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    6 LGNDWQHSLVLATGSADGSIHVFDLS--KGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIWE 73
            +G   Q+SL+LA+GSADG+I +FD+    G G  +QTL GH+DRVY  DFHP EP L SCSAD  ++IW+
Sbjct:  482 IGGPIQNSLILASGSADGNICLFDVGGRPGTGALLQTLEGHKDRVYGVDFHPNEPILASCSADCGIKIWQ 551          
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: A0A2V3IL28_9FLOR (WD repeat-containing protein 5B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL28_9FLOR)

HSP 1 Score: 85.9 bits (211), Expect = 9.650e-18
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    6 LGNDWQHSLVLATGSADGSIHVFDL--SKGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIW 72
            +G+  + SLVLA+GSADG+++VFD+  S G G  +QTL GH+D  YS DFHP EP L SCSAD  + IW
Sbjct:  484 IGDAIESSLVLASGSADGNVYVFDVGGSAGTGTLVQTLIGHKDIAYSVDFHPCEPILASCSADSKINIW 552          
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: A0A8H7Q4N1_MORIS (GED domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q4N1_MORIS)

HSP 1 Score: 85.1 bits (209), Expect = 1.720e-17
Identity = 34/72 (47.22%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   11 QHSLVLATGSADGSIHVFDLSKGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIWEPNRKRNTRK 82
            + S++LATGS+D  ++++++ +   + MQ L GH DRVY+A+FHPTEP L SCSAD T+++W P   R  +K
Sbjct:  422 EKSVLLATGSSDPYVYLYNIGENTAELMQRLEGHTDRVYAANFHPTEPILASCSADYTIKVWGPGAPRGKKK 493          
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: A0A168T094_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168T094_ABSGL)

HSP 1 Score: 79.7 bits (195), Expect = 1.400e-15
Identity = 33/65 (50.77%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   11 QHSLVLATGSADGSIHVFDLSKGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIWEPN 75
            + S++LATGSAD  ++++++ + + + MQ + GH DRVYS +FHPTEP L S SAD TV+IW P+
Sbjct:  439 EKSVLLATGSADPYVYLYNVGEDRSELMQRMEGHTDRVYSVNFHPTEPILASGSADFTVKIWGPS 503          
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 75.9 bits (185), Expect = 3.170e-14
Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    1 MGYN--ELGNDWQHSLVLATGSADGSIHVFDLS-------KGQGDEMQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIWEPNRKR 78
            +GY   EL       ++LATGSAD +I++ D++        G    +Q L GH DRVYS DFHP+EP L S SAD TV+IW P   R
Sbjct:  407 LGYQDRELQEKPDEVMLLATGSADNTIYLHDVTCRRGYGLNGSTSLLQRLEGHTDRVYSVDFHPSEPILASASADFTVKIWLPRTSR 493          
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Match: A0A2P6MV32_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MV32_9EUKA)

HSP 1 Score: 74.3 bits (181), Expect = 1.120e-13
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0
Query:   13 SLVLATGSADGSIHVFDLSKGQGDE--MQTLRGHRDRVYSADFHPTEPKLVSCSADKTVRIW 72
            S +LATGSAD  +++F++S  +G    +Q L GH D+VYS +FHP +P L S SAD TVR+W
Sbjct:  488 SFLLATGSADSQVYIFNVSGVEGSHILLQRLEGHTDKVYSVNFHPFDPILASASADGTVRLW 549          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEF6_ECTSI9.040e-5191.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNQ7_9PHAE5.850e-4691.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z281_9STRA1.860e-3566.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J4PPE8_9MYCE7.660e-1955.56Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
R7QRT1_CHOCR2.020e-1855.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IL28_9FLOR9.650e-1856.52WD repeat-containing protein 5B n=1 Tax=Gracilario... [more]
A0A8H7Q4N1_MORIS1.720e-1747.22GED domain-containing protein n=1 Tax=Mortierella ... [more]
A0A168T094_ABSGL1.400e-1550.77Uncharacterized protein n=1 Tax=Absidia glauca Tax... [more]
T0QW05_SAPDV3.170e-1445.98Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A2P6MV32_9EUKA1.120e-1351.61Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 34..73
e-value: 3.4E-10
score: 49.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 36..72
e-value: 8.6E-9
score: 35.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 41..82
score: 14.719
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 8..82
e-value: 1.2E-20
score: 75.7
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 15..78
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 16..82
score: 15.716
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 13..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:455454..456242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.911.1mRNA_C-linearis_contig104.911.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 455451..457389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.911.1 ID=prot_C-linearis_contig104.911.1|Name=mRNA_C-linearis_contig104.911.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=83bp
MGYNELGNDWQHSLVLATGSADGSIHVFDLSKGQGDEMQTLRGHRDRVYS
ADFHPTEPKLVSCSADKTVRIWEPNRKRNTRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf