prot_C-linearis_contig104.871.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.871.1
Unique Nameprot_C-linearis_contig104.871.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length121
Homology
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: A0A6H5JEN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEN4_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 9.840e-55
Identity = 89/120 (74.17%), Postives = 101/120 (84.17%), Query Frame = 0
Query:    1 MGDQAGYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAPSAFDDAGSFRIVTGGTGCDNYATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAIIWLCVESTGFNIDSFTMTAAA 120
            M  Q  YNVGWTRPGEFLRYTV VE++A+AFDF+F VAAP A+ ++GSF +VTGGTGCD++ TDLSGLVTVPSTGGWG+FASL +S  GTGGLS G A IWLCV S GFNIDSFTMTA A
Sbjct:  331 MESQNAYNVGWTRPGEFLRYTVTVEEAASAFDFRFQVAAPPAYHNSGSFHVVTGGTGCDDFTTDLSGLVTVPSTGGWGSFASLSVSNKGTGGLSYGHAKIWLCVVSKGFNIDSFTMTATA 450          
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: D7FTA2_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA2_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 9.010e-37
Identity = 68/115 (59.13%), Postives = 85/115 (73.91%), Query Frame = 0
Query:    6 GYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAPSAFDDAGSFRIVTGGTGCDNYATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAIIWLCVESTGFNIDSFTMTAAA 120
            G+ VGWTR GEF RYTV+V  +A AFDF+F VA+P+ F   GS ++V+GGTGC +Y TDLSG++ +  TG W  FA++  SG G+GGL  GP IIWLC  S+GFNIDSFTMT  A
Sbjct:  994 GHYVGWTRAGEFTRYTVDVRTAADAFDFEFVVASPTGFS--GSLQVVSGGTGCSDYETDLSGVIDIMPTGDWTTFATITSSGGGSGGLGEGPNIIWLCTISSGFNIDSFTMTTVA 1106          
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: D8LL13_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL13_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 1.430e-30
Identity = 58/84 (69.05%), Postives = 67/84 (79.76%), Query Frame = 0
Query:    2 GDQAGYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAPSAFDDAGSFRIVTGGTGCDNYATDLSGLVTVPSTGGWGNFASLPI 85
            G    Y+V W R  EFLRYTVNVEK+A+AFDF F VA   ++ D+GSFR+VTGGTGCD+Y TDLSGLV VPSTGGWG FASLP+
Sbjct:  900 GGHDDYHVAWIRATEFLRYTVNVEKAASAFDFTFQVATIPSYHDSGSFRVVTGGTGCDDYTTDLSGLVVVPSTGGWGTFASLPV 983          
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: D7FGU3_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU3_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 5.220e-28
Identity = 60/115 (52.17%), Postives = 78/115 (67.83%), Query Frame = 0
Query:    6 GYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAP-SAFDDAGSFRIVTGGTGCDNY-ATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAIIWLCVESTGFNIDSFTMTA 118
            GYNVGW R GE+LRYT++V +  +   F F V++P +  D+ G+FR+VTGG GCD+  ATDLSGLVT P TG WG++ +  +  NG   L+ G   IWLCV S GFN+D F M A
Sbjct:  812 GYNVGWMRSGEYLRYTIDVTEDISDLGFSFSVSSPYTNIDERGTFRVVTGGGGCDDDDATDLSGLVTAPYTGAWGSYET--VEANGGQSLATGQTEIWLCVVSAGFNLDYFDMGA 924          
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: A0A6H5JFJ7_9PHAE (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ7_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.560e-26
Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 0
Query:    6 GYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAP-SAFDDAGSFRIVTGGTGCDNY-ATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAIIWLCVESTGFNIDSFTMTA 118
            GYNVGW   GE+LRYT++V +  +   F F V++P +  D+ G+FR+VTGG GCD+  ATDLSGLVT P TG WG++ +  +  NG   L+ G   IWLCV S GFN+D F + A
Sbjct:  632 GYNVGWMSSGEYLRYTIDVTEDISDLGFSFSVSSPYTNVDERGTFRVVTGGGGCDDDDATDLSGLVTAPYTGAWGSYET--VEANGGQSLATGQTEIWLCVVSAGFNLDYFDIGA 744          
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: A0A6B2TSC0_9ACTN (Carbohydrate-binding protein n=1 Tax=Streptomyces sp. SID13031 TaxID=2706046 RepID=A0A6B2TSC0_9ACTN)

HSP 1 Score: 62.0 bits (149), Expect = 9.920e-9
Identity = 39/115 (33.91%), Postives = 61/115 (53.04%), Query Frame = 0
Query:    6 GYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAPSAFDDAGSFRIVTGGTGCDNYATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAIIWLCVESTGFNIDSFTMTAAA 120
            GYNVGWT  G++  YTVNV  +A  +     VA P+A  +A      +G        T+LSG V++PSTGGW N++++        GL      + +  +S G+N++S   T+ +
Sbjct:  679 GYNVGWTSSGQWFHYTVNVA-TAGTYSVAMRVATPAAVTNAFHLASASG--------TNLSGNVSLPSTGGWQNWSTVTTQVTLPAGLQT----LTVYQDSGGWNLNSLQFTSGS 780          
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: UPI000AB52F8D (carbohydrate-binding protein n=1 Tax=Streptomyces sp. NRRL F-525 TaxID=1463861 RepID=UPI000AB52F8D)

HSP 1 Score: 61.2 bits (147), Expect = 1.860e-8
Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 0
Query:    6 GYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAPSAFDDAGSFRIVTGGTGCDNYATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAIIWLCVESTGFNIDSFTMTAAA 120
            GYN+GWT PG++ RYTV+V  +A  +     VAAPSA    G+  +       D   T+L+G V +P+TG W  + +          L  G  ++ L  +S G+NI+S   TA++
Sbjct:  690 GYNLGWTGPGQWFRYTVDVA-TAGTYTLDLRVAAPSAVP--GALHL------SDASGTNLTGAVDLPATGDWQTWGTATTHVT----LPAGRQVLTLNQDSGGWNINSLVFTASS 791          
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: UPI001EDE5917 (carbohydrate-binding protein n=2 Tax=Dactylosporangium TaxID=35753 RepID=UPI001EDE5917)

HSP 1 Score: 60.8 bits (146), Expect = 2.470e-8
Identity = 40/114 (35.09%), Postives = 59/114 (51.75%), Query Frame = 0
Query:    6 GYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAPSA--FDDAGSFRIVTGGTGCDNYATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAIIWLCVESTGFNIDSFTMT 117
            G NVGWT PG +L+Y V+V + A  +D +  VA  +     DA SFR   G          +    +VP TGGWG++ S+ +       L+ G  I+ +  E+ GFN+D F +T
Sbjct:  624 GKNVGWTAPGNWLQYRVDVAQ-AGTYDLELRVATGTGAVVPDAVSFRDAAGA---------VLATASVPDTGGWGSYGSVHVPVT----LAAGDQIVTVYCETGGFNLDYFRLT 723          
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: A0A402D0H8_9BACT (Beta-N-acetylhexosaminidase n=2 Tax=Capsulimonas corticalis TaxID=2219043 RepID=A0A402D0H8_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 3.160e-8
Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 0
Query:    1 MGDQAGYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAPSAFDDAGSFRIVTGGTGCDNYATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAIIWLCVESTGFNIDSFTMT 117
             GD   ++VG+TRPG++L+YTV V  +A A+D    V++  A    G F +       D    +L+G +T P+TGGW  +  +  S +    L  G +++    ++ G+N+DS T T
Sbjct:  341 FGDGRRFDVGYTRPGQWLKYTVTVA-AAGAYDLNVRVSSGEA---GGVFHVE------DGSGANLTGPMTAPATGGWDTWTLVHASVH----LQAGRSVLKFVEDTGGYNLDSMTFT 443          
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Match: UPI001A41BD1E (carbohydrate-binding protein n=1 Tax=Actinoplanes deccanensis TaxID=113561 RepID=UPI001A41BD1E)

HSP 1 Score: 60.1 bits (144), Expect = 4.590e-8
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    6 GYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVA----APSAFDDAGSFRIVTGGTGCDNYATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAIIWLCVESTGFNID 112
            G N+GWT PG +LRY V+V + A  +D +  VA    AP+   DA SFR        D   T+L+  V+VP+TGGWG + S+ +       L+ G  ++ +  E+ GFN+D
Sbjct:  626 GKNIGWTAPGNWLRYRVDVAR-AGTYDLELRVANGTGAPAT--DAISFR--------DAGGTELA-TVSVPATGGWGTYQSVHVPVT----LAAGDQLVTVYCETGGFNLD 720          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEN4_9PHAE9.840e-5574.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTA2_ECTSI9.010e-3759.13Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sili... [more]
D8LL13_ECTSI1.430e-3069.05Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sili... [more]
D7FGU3_ECTSI5.220e-2852.17Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sili... [more]
A0A6H5JFJ7_9PHAE1.560e-2650.43Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. ... [more]
A0A6B2TSC0_9ACTN9.920e-933.91Carbohydrate-binding protein n=1 Tax=Streptomyces ... [more]
UPI000AB52F8D1.860e-834.78carbohydrate-binding protein n=1 Tax=Streptomyces ... [more]
UPI001EDE59172.470e-835.09carbohydrate-binding protein n=2 Tax=Dactylosporan... [more]
A0A402D0H8_9BACT3.160e-832.48Beta-N-acetylhexosaminidase n=2 Tax=Capsulimonas c... [more]
UPI001A41BD1E4.590e-837.84carbohydrate-binding protein n=1 Tax=Actinoplanes ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 2..119
e-value: 1.0E-16
score: 63.4
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 4..117
IPR005084Carbohydrate binding module family 6PFAMPF03422CBM_6coord: 5..117
e-value: 5.2E-7
score: 30.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:110910..112133 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.871.1mRNA_C-linearis_contig104.871.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 110904..112170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.871.1 ID=prot_C-linearis_contig104.871.1|Name=mRNA_C-linearis_contig104.871.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=121bp
MGDQAGYNVGWTRPGEFLRYTVNVEKSAAAFDFKFHVAAPSAFDDAGSFR
IVTGGTGCDNYATDLSGLVTVPSTGGWGNFASLPISGNGTGGLSNGPAII
WLCVESTGFNIDSFTMTAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf
IPR005084CMB_fam6