prot_C-linearis_contig104.865.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig104.865.1
Unique Nameprot_C-linearis_contig104.865.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length188
Homology
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BLAST of mRNA_C-linearis_contig104.865.1 vs. uniprot
Match: D7FIQ5_ECTSI (POT1 protection of telomeres 1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ5_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 3.850e-88
Identity = 146/205 (71.22%), Postives = 164/205 (80.00%), Query Frame = 0 
Query:    4 PRIASSIAQVSMESMRVENLRGSVQTVFPIHACMPPTANNSETQDYGTVGSDGPIEGA---------------AKVFQVILRDLSVPGSTSTSNTLHHRINAYFYDKWADKHHAGIGPGDEIEVSGPAARLVHPDPSAADNGDHPFCLVFHTANDDALLALGAVAANHPSGGAQG-GVRAEE--DTVSCRVVRKAEQPGP--RGG 188
            P +A SIA+V+ ES+RVE LRG VQTVFPIHACM PTANNSETQDYGTVGSDGPIEGA               AKVFQV LRDLS+PG++  +  LHHRI+AYFYDKWAD HH+GIGPGD+IEVSGPAARLVHPDPSA+DNGDHPFCLVFHT  DD+LLALGAVAA+H +G A G G R++E  D VSC+VVRKA QPG   RGG
Sbjct:    6 PTVARSIAEVTRESIRVEKLRGRVQTVFPIHACMTPTANNSETQDYGTVGSDGPIEGATKRSASILARDSVASAKVFQVTLRDLSLPGNSGANGNLHHRIDAYFYDKWADDHHSGIGPGDDIEVSGPAARLVHPDPSASDNGDHPFCLVFHTGRDDSLLALGAVAADHLAGVAGGSGGRSDEADDVVSCKVVRKAAQPGAGSRGG 210
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BLAST of mRNA_C-linearis_contig104.865.1 vs. uniprot
Match: A0A6H5JCK4_9PHAE (Telo_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK4_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 5.800e-87
Identity = 140/186 (75.27%), Postives = 161/186 (86.56%), Query Frame = 0 
Query:    4 PRIASSIAQVSMESMRVENLRGSVQTVFPIHACMPPTANNSETQDYGTVGSDGPIEGAAKVFQVILRDLSVPGSTSTSNTLHHRINAYFYDKWADKHHAGIGPGDEIEVSGPAARLVHPDPSAADNGDHPFCLVFHTANDDALLALGAVAANHPSGGAQGGV-RAEE--DTVSCRVVRKAEQPGPR 186
            P +A SIA+V+ E++RVE LRG VQTVFPIHACM PTA+NSETQDYGTVGSDGPIEGA KVFQV LRDLS+PG++  +  LHHRI+AYFYDKWAD HH+GIGPGD+IEVSGPAARLVHPDPSA+DNGDHPFCLVFHT +DD+LLALGA+AA+H +G A GG  R +E  D VSC+VVRKA QPG R
Sbjct:    6 PTVARSIAEVTREAIRVEKLRGRVQTVFPIHACMTPTASNSETQDYGTVGSDGPIEGATKVFQVTLRDLSLPGNSGANGNLHHRIDAYFYDKWADDHHSGIGPGDDIEVSGPAARLVHPDPSASDNGDHPFCLVFHTGSDDSLLALGAMAADHLAGVAGGGGGRNDEADDVVSCKVVRKAVQPGAR 191
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIQ5_ECTSI3.850e-8871.22POT1 protection of telomeres 1 homolog n=1 Tax=Ect... [more]
A0A6H5JCK4_9PHAE5.800e-8775.27Telo_bind domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:61503..63242 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.865.1mRNA_C-linearis_contig104.865.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig104 61503..63511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig104.865.1 ID=prot_C-linearis_contig104.865.1|Name=mRNA_C-linearis_contig104.865.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=188bp
MASPRIASSIAQVSMESMRVENLRGSVQTVFPIHACMPPTANNSETQDYG
TVGSDGPIEGAAKVFQVILRDLSVPGSTSTSNTLHHRINAYFYDKWADKH
HAGIGPGDEIEVSGPAARLVHPDPSAADNGDHPFCLVFHTANDDALLALG
AVAANHPSGGAQGGVRAEEDTVSCRVVRKAEQPGPRGG
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