prot_C-linearis_contig103.857.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig103.857.1
Unique Nameprot_C-linearis_contig103.857.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length105
Homology
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Match: D7G5K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 5.340e-20
Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = 0
Query:   32 PKPSVKLANVPDDLPARKSWHVERCHVMETVLEALTSDGRPRLVGLVGDSGSGKATAASDIVRSPNIRQVLS 103
            PKP  K A++P   P RKSWHVER HVM+TV+EALT +  P LVGLVGDSG+GK TAAS++V S  +R+  S
Sbjct:  191 PKPPTKKADIPQGTPMRKSWHVERRHVMDTVVEALTGEAGPHLVGLVGDSGAGKTTAASELVGSNVVRESFS 262          
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 8.870e-20
Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 0
Query:   33 KPSVKLANVPDDLPARKSWHVERCHVMETVLEALTSDGRPRLVGLVGDSGSGKATAASDIVRSPNIRQVLS 103
            K   KLA +P   P RKSWHVER +VME V EALT+ G P LVGLVGDSGSGK TAAS+IVRS  +RQ  S
Sbjct:  195 KTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFS 265          
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.940e-19
Identity = 46/72 (63.89%), Postives = 55/72 (76.39%), Query Frame = 0
Query:   32 PKPSVKLANVPDDLPARKSWHVERCHVMETVLEALTSDGRPRLVGLVGDSGSGKATAASDIVRSPNIRQVLS 103
            PKP +K A VP   P RKSWHVER HV ETV+EALT +  PRLVGLVGDSG+GK TAA+++VRS  +R+  S
Sbjct:   92 PKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFS 162          
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 5.680e-19
Identity = 44/66 (66.67%), Postives = 50/66 (75.76%), Query Frame = 0
Query:   38 LANVPDDLPARKSWHVERCHVMETVLEALTSDGRPRLVGLVGDSGSGKATAASDIVRSPNIRQVLS 103
            LA VP   PARKSWHVER HVM  V +AL  +G PRLVGLVGDSGSGK TAA++IVRS  +R+  S
Sbjct:  178 LATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFS 243          
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.070e-18
Identity = 45/72 (62.50%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   32 PKPSVKLANVPDDLPARKSWHVERCHVMETVLEALTSDGRPRLVGLVGDSGSGKATAASDIVRSPNIRQVLS 103
            PKP  K+ANVP   P  KSWHVER +V ETV +AL +DG P LVGLVGDSG+GK TAAS IV S  +R+  S
Sbjct:  194 PKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFS 265          
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 6.860e-18
Identity = 43/71 (60.56%), Postives = 50/71 (70.42%), Query Frame = 0
Query:   33 KPSVKLANVPDDLPARKSWHVERCHVMETVLEALTSDGRPRLVGLVGDSGSGKATAASDIVRSPNIRQVLS 103
            K   KL  VP   PARKSW+V+R HVM+TV E L SDG PRLVGLVG SGSGK T AS+ VRS  +++  S
Sbjct:   28 KTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFS 98          
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 4.720e-15
Identity = 41/63 (65.08%), Postives = 45/63 (71.43%), Query Frame = 0
Query:   33 KPSVKLANVPDDLPARKSWHVERCHVMETVLEALTSDGRPRLVGLVGDSGSGKATAASDIVRS 95
            K   K A +P   P  KSWHVER  V+E V E LT+DG P LVGLVGDSGSGK TAAS+IVRS
Sbjct:  169 KTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRS 231          
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Match: A0A6H5KRI5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI5_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 4.810e-14
Identity = 41/79 (51.90%), Postives = 49/79 (62.03%), Query Frame = 0
Query:   25 DQPLSNDPKPSVKLANVPDDLPARKSWHVERCHVMETVLEALTSDGRPRLVGLVGDSGSGKATAASDIVRSPNIRQVLS 103
            DQ L + P+   K A VP     RKSWHVER HVM TVL+AL    R  +V L G SGSGK T A++IVRS  +R+  S
Sbjct:    9 DQRLESLPRSLGKQAAVPIGAHVRKSWHVERRHVMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSAEVREAFS 87          
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 7.000e-8
Identity = 38/106 (35.85%), Postives = 50/106 (47.17%), Query Frame = 0
Query:   28 LSNDPKPSVKLANVPDDLPARKSWHVERCHVMETVLEALTS------------------------------DGRPRLVGLVGDSGSGKATAASDIVRSPNIRQVLS 103
            L+  PK S   A VP  LP R+SWHV R  V+ TVL +L S                              +  PR+VGLVG+SG+GK   A++IVR P + +  S
Sbjct:  256 LARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFS 361          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G5K4_ECTSI5.340e-2061.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZY7_ECTSI8.870e-2066.20NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5J759_9PHAE2.940e-1963.89NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KLK9_9PHAE5.680e-1966.67NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KRK8_9PHAE1.070e-1862.50NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KYW3_9PHAE6.860e-1860.56NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KJ30_9PHAE4.720e-1565.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRI5_9PHAE4.810e-1451.90NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L0N2_9PHAE7.000e-835.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 33..102
e-value: 1.5E-6
score: 29.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:529441..530308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.857.1mRNA_C-linearis_contig103.857.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig103 528551..531755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig103.857.1 ID=prot_C-linearis_contig103.857.1|Name=mRNA_C-linearis_contig103.857.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=105bp
MCRGDMEVCRGLQQTGQESTDRKQDQPLSNDPKPSVKLANVPDDLPARKS
WHVERCHVMETVLEALTSDGRPRLVGLVGDSGSGKATAASDIVRSPNIRQ
VLSI*
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