prot_C-linearis_contig103.839.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig103.839.1
Unique Nameprot_C-linearis_contig103.839.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length208
Homology
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: A0A6H5KUS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS8_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 1.070e-115
Identity = 169/207 (81.64%), Postives = 186/207 (89.86%), Query Frame = 0
Query:    1 MYSTTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 207
            M+STT YDHLVKLL+IGDSGVGKSCLLLRYSD QFSGSYISTIGIDFKIKT  LMG+K KLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV+D KSF+NV NWMRQIELNA+PDVN+TLVGNK DV ++ER VS EQGQ LAAE G+ VRFFETSARSNVNVTEAFEGLATDVI RLQ+QD+A++A V  LKLG+EEP  K +DCC
Sbjct:    2 MHSTTGYDHLVKLLIIGDSGVGKSCLLLRYSDDQFSGSYISTIGIDFKIKTVFLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDLKSFKNVGNWMRQIELNAAPDVNVTLVGNKSDVAEEERVVSLEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQAQDEASLARVAPLKLGQEEPTKK-SDCC 207          
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: A0A485LS68_9STRA (Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LS68_9STRA)

HSP 1 Score: 249 bits (636), Expect = 3.910e-81
Identity = 128/206 (62.14%), Postives = 162/206 (78.64%), Query Frame = 0
Query:    4 TTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQS--QDQAAIAGVPTLKLGKEEPKSKLADCC 207
            +++YD LVKLL+IGDSGVGKSCLL+RYSD  F+ S+I+TIGIDFK+KT  + G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+DD SF+NV NWMRQI+ +ASP+VN  L+GNKCDV   ERAV+ EQG+ALA E G  V+FFETSA+SN+NV EAF  +A DV  RL     D++ +A    +KL ++  ++    CC
Sbjct:    5 SSKYDLLVKLLLIGDSGVGKSCLLMRYSDDSFTTSFITTIGIDFKVKTIEVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALANEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRSDVANQTRIKLDEQNSRAASEGCC 208          
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: D7FME1_ECTSI (Rab8B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME1_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.330e-78
Identity = 122/153 (79.74%), Postives = 135/153 (88.24%), Query Frame = 0
Query:   55 MGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 207
            MG+K KLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV+D KSFRNV NWMRQIELNA+PDVN+TLVGNK DV + ER VSFEQGQ LAAE G+ VRFFETSARSNVNVTEAFEGLATDVI RLQ+QD+A++A V  LKLG+EE   K +DCC
Sbjct:    1 MGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDVKSFRNVGNWMRQIELNAAPDVNVTLVGNKSDVAEAERVVSFEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQTQDEASLARVAPLKLGQEESTEK-SDCC 152          
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC)

HSP 1 Score: 241 bits (616), Expect = 4.010e-78
Identity = 127/209 (60.77%), Postives = 161/209 (77.03%), Query Frame = 0
Query:    1 MYSTTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQS--QDQAAIAGVPTLKLGKEEPKSKLADCC 207
            M  +++YD LVKLL+IGDSGVGKSCLL+RYSD  F+ S+I+TIGIDFK+KT  + G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+DD SF+NV NWMRQI+ +ASP+VN  L+GNKCDV   ER V+ +QG+ LAAE G  V+FFETSA+SN+NV EAF  +A DV  RL     D+  +A    +KL  ++   + +D C
Sbjct:    1 MVHSSKYDLLVKLLLIGDSGVGKSCLLMRYSDDTFTSSFITTIGIDFKVKTIDVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERVVTTQQGEELAAEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRLDVANERKIKL--DDHADRTSDGC 205          
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: W7U3B0_9STRA (Rab8-family small gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3B0_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.510e-76
Identity = 122/203 (60.10%), Postives = 155/203 (76.35%), Query Frame = 0
Query:    5 TQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 207
            ++YDHL+KLL+IGDSGVGKSCLLLRYS+  F+ S+I+TIGIDFKIK+  L  +K+KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D++SF NV NWMRQIE +AS  VN  L+GNKCDV   +R VS EQG+ LA E   R++FFETSA+ NVNV EAF  +A D+ LR+ ++     +G   +K+G     +   +CC
Sbjct:   11 SKYDHLIKLLLIGDSGVGKSCLLLRYSEDSFTPSFITTIGIDFKIKSLPLEDKKLKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANVKNWMRQIEQHASESVNKILIGNKCDVDPADRRVSLEQGRKLAEEY--RIKFFETSAKENVNVDEAFYTVARDIALRIDNEVDLTASG-KNVKIGPGVGPAGGKECC 210          
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: A0A6A2YIZ8_HIBSY (Ras-related protein RABE1e n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YIZ8_HIBSY)

HSP 1 Score: 235 bits (599), Expect = 1.870e-75
Identity = 122/204 (59.80%), Postives = 155/204 (75.98%), Query Frame = 0
Query:    7 YDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLA---DCC 207
            YD L+KLL+IGDSGVGKSCLLLR+SDG F+ S+I+TIGIDFKI+T  L G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF N+ NW+R IE +AS +VN  LVGNK D+ + +RAV   QGQALA E G  ++FFETSA++N+NV E F  +A+D+  RL   D  A      +K+ KE+P +  A   +CC
Sbjct:   12 YDFLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKADMDESKRAVPTSQGQALADEYG--IKFFETSAKTNLNVEEVFFSIASDIKQRLTESDNKAEPAA--IKINKEDPGASSAQKSNCC 211          
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: H3G925_PHYRM (Uncharacterized protein n=19 Tax=Oomycota TaxID=4762 RepID=H3G925_PHYRM)

HSP 1 Score: 234 bits (598), Expect = 2.250e-75
Identity = 119/207 (57.49%), Postives = 153/207 (73.91%), Query Frame = 0
Query:    1 MYSTTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 207
            M  +++YD L+KLL+IGDSGVGKSC+LLRYSD  F+ S+I+TIGIDFK+KT  + G+++KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+DD SF+N+ NWM QI  NAS +VN  L+GNKCDV   ERAV+ +QGQ LA E G  ++FFETSA+SN N+ EAF  +A D+  RL   +   +      K   +E + +  D C
Sbjct:    1 MVHSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFG--IKFFETSAKSNKNIDEAFRSIAVDIQKRLAESEHDRLDVANGSKFRVDESQEQAKDSC 205          
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: Q019D2_OSTTA (Small GTPase superfamily, Rab type n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q019D2_OSTTA)

HSP 1 Score: 234 bits (598), Expect = 2.740e-75
Identity = 124/201 (61.69%), Postives = 153/201 (76.12%), Query Frame = 0
Query:    7 YDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 207
            YDHL+KLL+IGDSGVGKSCLLLR+SD QF+ S+I+TIGIDFKIKT  L G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDVSD++SF NV  WMR IE +AS +VN  L+GNKCDV +D+R +S  +GQALA E G  + FFETSA+S+VNV +AF  +A D+  RL       +     + LG +   +K A CC
Sbjct:   18 YDHLLKLLLIGDSGVGKSCLLLRFSDDQFTTSFITTIGIDFKIKTVELGGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVSDERSFENVRGWMRNIEQHASSNVNKILIGNKCDVKEDKRVISKARGQALADEFG--IPFFETSAKSSVNVNDAFMTIAGDIKNRLTGSK--GLGAPNAINLG-DRAATKRASCC 213          
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: A0A5J4Y2D1_9CHLO (Rab8-family small GTPase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y2D1_9CHLO)

HSP 1 Score: 234 bits (597), Expect = 4.150e-75
Identity = 122/207 (58.94%), Postives = 156/207 (75.36%), Query Frame = 0
Query:    7 YDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQA-----AIAGVPTLKLGKE-EPKSKLADCC 207
            YD+L+KLL+IGDSGVGKSCLLLR+S+  F+ S+I+TIGIDFKIK  LL  + +KLQIWDTAGQERFR ITSAYYRG+MGILLVYDV+DD SF N+ NWMR IE +AS +VN  LVGNKCD+ + +R V + +GQALA E G  ++FFETSA+SN+ V E F+ +A DV+LRL+   QA     A +G   +K+ ++   K   + CC
Sbjct:   10 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILLDNKWIKLQIWDTAGQERFRTITSAYYRGAMGILLVYDVTDDASFNNIRNWMRNIEQHASDNVNKVLVGNKCDMDESKRVVPYSKGQALADEFG--IQFFETSAKSNLKVDEVFQSVAKDVMLRLRETQQAGGGAPASSGGTRVKVDQQGSAKPSSSGCC 214          
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match: I1HT75_BRADI (Uncharacterized protein n=16 Tax=Poaceae TaxID=4479 RepID=I1HT75_BRADI)

HSP 1 Score: 234 bits (596), Expect = 6.090e-75
Identity = 120/206 (58.25%), Postives = 157/206 (76.21%), Query Frame = 0
Query:    7 YDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKL-----GKEEPKSKLADCC 207
            YD+L+KLL+IGDSGVGKSCLLLR+SDG F+ S+I+TIGIDFKI+T  L G+++KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF N+ NW+R IE +AS +VN  L+GNK D+ + +RAVS  QGQALA E G  ++FFETSA++N+NV + F  +A D+  RL   D        T+K+     G E+P+S+ + CC
Sbjct:   13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLIGNKADMDESKRAVSTAQGQALADEYG--IKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPED--QTIKINKTGQGSEDPESQKSACC 214          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUS8_9PHAE1.070e-11581.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485LS68_9STRA3.910e-8162.14Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=... [more]
D7FME1_ECTSI1.330e-7879.74Rab8B, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A067CHF2_SAPPC4.010e-7860.77Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
W7U3B0_9STRA1.510e-7660.10Rab8-family small gtpase n=2 Tax=Monodopsidaceae T... [more]
A0A6A2YIZ8_HIBSY1.870e-7559.80Ras-related protein RABE1e n=2 Tax=Hibiscus syriac... [more]
H3G925_PHYRM2.250e-7557.49Uncharacterized protein n=19 Tax=Oomycota TaxID=47... [more]
Q019D2_OSTTA2.740e-7561.69Small GTPase superfamily, Rab type n=2 Tax=Ostreoc... [more]
A0A5J4Y2D1_9CHLO4.150e-7558.94Rab8-family small GTPase n=1 Tax=Trebouxia sp. A1-... [more]
I1HT75_BRADI6.090e-7558.25Uncharacterized protein n=16 Tax=Poaceae TaxID=447... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 152..174
score: 39.64
coord: 34..50
score: 37.37
coord: 11..32
score: 52.88
coord: 52..74
score: 50.64
coord: 114..127
score: 50.09
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 12..177
e-value: 3.2E-26
score: 103.1
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 13..178
e-value: 1.3E-12
score: 41.4
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 16..205
e-value: 1.2E-5
score: 30.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 11..177
e-value: 3.6E-92
score: 322.2
NoneNo IPR availableGENE3D3.40.50.300coord: 4..207
e-value: 3.3E-64
score: 217.9
NoneNo IPR availablePANTHERPTHR24073:SF1022coord: 4..188
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 4..188
NoneNo IPR availablePROSITEPS51419RABcoord: 6..207
score: 34.915
IPR001806Small GTPasePFAMPF00071Rascoord: 12..174
e-value: 1.7E-59
score: 200.0
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..168
e-value: 4.3E-26
score: 89.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:327322..335601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.839.1mRNA_C-linearis_contig103.839.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig103 326997..336823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig103.839.1 ID=prot_C-linearis_contig103.839.1|Name=mRNA_C-linearis_contig103.839.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=208bp
MYSTTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIK
TALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRN
VSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERV
RFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPK
SKLADCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase