prot_C-linearis_contig102.809.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.809.1
Unique Nameprot_C-linearis_contig102.809.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length253
Homology
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: D7FYM7_ECTSI (Proteasome subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM7_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 2.830e-174
Identity = 240/252 (95.24%), Postives = 247/252 (98.02%), Query Frame = 0
Query:    1 MSQGPAPHSAAPIWHSEGTKNVEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            MSQ P+PHSA PIWHSEGTK+++VLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTR+DEKP RSA +TVELVKEL VTAGERDIYTGDAVEIT+ISKDGTSTQMFPLKKD
Sbjct:    1 MSQRPSPHSA-PIWHSEGTKDLQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELLVTAGERDIYTGDAVEITIISKDGTSTQMFPLKKD 251          
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: A0A835ZC48_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC48_9STRA)

HSP 1 Score: 384 bits (986), Expect = 6.390e-133
Identity = 185/243 (76.13%), Postives = 210/243 (86.42%), Query Frame = 0
Query:   10 AAPIWHSEGTKNVEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            A  +W +EG  +V    S IDHGVTQNPFERRWSPYDFNGGTTLA+AG DYVV+ ADTRMSTGY IMSRDQTKLHQLTSKCVIASAGC++DVTTLWK LD  M MY HN+ K+M+TPA AQMLANTLYYRRFFPYYSFNVL GLD +GKG+VFSYDAIGS+ERV YSASGSGQ+YIIP++DNLV FKTR D KP R+A +TV+LVK++F+TAGERDIYTGDAVEI +I+  GT TQ+F LKKD
Sbjct:   15 ALAMWSTEGQSDVRP--SDIDHGVTQNPFERRWSPYDFNGGTTLAVAGEDYVVIGADTRMSTGYQIMSRDQTKLHQLTSKCVIASAGCRSDVTTLWKMLDHRMVMYKHNIGKDMSTPAAAQMLANTLYYRRFFPYYSFNVLAGLDAEGKGAVFSYDAIGSYERVEYSASGSGQSYIIPVMDNLVGFKTRLDPKPVRTAEETVDLVKDVFITAGERDIYTGDAVEICIITATGTQTQIFNLKKD 255          
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: A0A7S2DDA1_9STRA (Proteasome subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDA1_9STRA)

HSP 1 Score: 352 bits (904), Expect = 8.020e-120
Identity = 168/243 (69.14%), Postives = 201/243 (82.72%), Query Frame = 0
Query:   12 PIWHSEGTKNVEV--LSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            PIWHSEG  +V +   +  IDHGVTQNP+ERR+SPYDFNGGTTLA+AG D+VVVA DTRMS+GY I+SR  +KLH LTSKC++A+AGCKTDV TL   L++ M MYDH+  KEM+T A AQML+NTLYYRRFFPYYSFNVL GLDE+G+G+VFSYDAIGS+ER P+SASGSGQ+Y+IPL+DNLV FKTR D  P  ++ + V +VK+ FVTAGERDIYTGD +EI+VI KDG  T  FPLKKD
Sbjct:   54 PIWHSEGQASVPLGPTADTIDHGVTQNPYERRFSPYDFNGGTTLAVAGKDFVVVAGDTRMSSGYEILSRKVSKLHPLTSKCILAAAGCKTDVDTLTNMLNIKMQMYDHDCGKEMSTTAAAQMLSNTLYYRRFFPYYSFNVLAGLDEEGRGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRTDVMPDFTSEEAVNIVKDAFVTAGERDIYTGDTLEISVIKKDGIETITFPLKKD 296          
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: A0A7S2SKB7_9STRA (Proteasome subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKB7_9STRA)

HSP 1 Score: 341 bits (874), Expect = 7.340e-116
Identity = 163/247 (65.99%), Postives = 196/247 (79.35%), Query Frame = 0
Query:    6 APHSAAPIWHSEGTKNVEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            AP     +W SEG   +    S  DHGVTQNP+ERR+SPYDFNGGTTLAIAG D+VVVAADTR+S+GY I+SR+ +KLH LT +CV+A+AGCKTDV TL   L   M MY+H+M K M TPAVAQML+NTLYYRRFFPYYSFNVL G+D  GKG+VFSYDAIGS+ERVPYS+SGSGQ Y++PL+DNLV FK RQD  P  +  + V +VK+ F+TAGERDIYTGDAVEI VI+  G ++++ PLKKD
Sbjct:   10 APPPTPIMWSSEGAVALPAEPSAFDHGVTQNPYERRFSPYDFNGGTTLAIAGKDFVVVAADTRLSSGYEILSRNVSKLHPLTGRCVLAAAGCKTDVDTLRNTLHARMQMYEHDMGKAMDTPAVAQMLSNTLYYRRFFPYYSFNVLAGIDSDGKGAVFSYDAIGSYERVPYSSSGSGQNYMVPLMDNLVCFKNRQDTPPELTMEEVVRIVKDAFITAGERDIYTGDAVEIKVITASGVASEIMPLKKD 256          
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: A0A7S2FLM8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLM8_9STRA)

HSP 1 Score: 338 bits (868), Expect = 7.920e-115
Identity = 167/242 (69.01%), Postives = 195/242 (80.58%), Query Frame = 0
Query:   12 PIWHSEGTKNVEV-LSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            PIW SEG    E      IDHGVT+NP+ERR+SPYDFNGGTTLA++G D+VVVA DTRMS+GY I SR+  KLHQLTSK V+A+AGCKTDV TL   L   M MY+H+  KEM+T AVAQML+NTLY RRFFPYYSFNVL GLDE+GKG+VFSYDAIGS+ER P+SASGSGQ+Y+IPL+DNLV FKTR D  P  +  + V +VK+ FVTAGERDIYTGDAVEI VIS  G +T++FPLKKD
Sbjct:   23 PIWSSEGPSAGEFGKRDHIDHGVTENPYERRFSPYDFNGGTTLAVSGKDFVVVAGDTRMSSGYEIKSRNVPKLHQLTSKTVLAAAGCKTDVDTLTNLLRTRMQMYEHDCNKEMSTTAVAQMLSNTLYGRRFFPYYSFNVLAGLDEEGKGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRLDPVPDMTVEEIVSIVKDAFVTAGERDIYTGDAVEIKVISATGVTTELFPLKKD 264          
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: A0A7S2XWL8_9STRA (Proteasome subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWL8_9STRA)

HSP 1 Score: 333 bits (853), Expect = 1.110e-112
Identity = 159/254 (62.60%), Postives = 198/254 (77.95%), Query Frame = 0
Query:    5 PAPHSAAPIWHSEGTKN------VEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            P   +  PIWHSE + +      + V  S   H V+  P + RW PY+FNGGTTLAIAG+++VVVAADTRMS GY+I+SR+++KLH+LT KC++A+AGC+TDVTTL   LD+ M MY HN+  EM T AVAQMLANTLYYRRFFPYYSFNVLCG+D++GKG V+SYDAIGSFE VPYSASGSGQ+YIIPL+D+ V FK R   KP  +  +TV++VK  FVTAGERDIYTGD VEI V++ +G  +++FPLKKD
Sbjct:    2 PTVQNGVPIWHSESSNSTVKPYQLPVNGSSQKHEVSGGPVQHRWGPYEFNGGTTLAIAGSNFVVVAADTRMSQGYNILSRNESKLHKLTEKCILAAAGCQTDVTTLRNVLDIRMQMYQHNVGHEMPTTAVAQMLANTLYYRRFFPYYSFNVLCGIDKEGKGVVYSYDAIGSFESVPYSASGSGQSYIIPLMDSTVAFKNRTQPKPNYTIEETVDIVKSAFVTAGERDIYTGDEVEIKVLTAEGCRSEIFPLKKD 255          
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: K0S6G4_THAOC (Proteasome subunit beta n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6G4_THAOC)

HSP 1 Score: 322 bits (825), Expect = 5.220e-108
Identity = 152/229 (66.38%), Postives = 186/229 (81.22%), Query Frame = 0
Query:   24 VLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            +  SGIDHGVTQ P+ERR+SPY+FNGGTTLAI+G DY VVAADTR+S+GY I+SR+ +KLH LT +CV+ SAGCKTDV  L   LD+ M +Y HN  K MATP+VAQML NTLYY+RFFPYYSFNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ+++IPL+DN++  K R DE+    A + VE+VK+ F+TAGERDIYTGDAV+I VI+KDG   Q F LK D
Sbjct:   55 IDGSGIDHGVTQAPYERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTGRCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVISHKNRLDERRDLPAEEVVEIVKDAFLTAGERDIYTGDAVDIMVITKDGIDKQTFQLKAD 283          
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: A0A7S3PW57_9STRA (Proteasome subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW57_9STRA)

HSP 1 Score: 317 bits (812), Expect = 3.510e-106
Identity = 154/255 (60.39%), Postives = 191/255 (74.90%), Query Frame = 0
Query:   10 AAPIWHSEGTKNVEVLSSG------------IDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            A P+  SEG   + V  +             IDHGVTQ P+ER +SPYDFNGGTTLAI+G DY +VAADTR+STGY I+SR+ TKLH+LTSKCV+ SAGCKTD+  L   LD++  +Y HN  KEM+TP+VAQML NTLYY+RFFPYYSFNVL G+D++GKG+V+SYDAIGSFER P +A+GSGQ+++IPLLDN+++   R DEK    A + VE+VK+ FVTAGERDIYTGD +EI VI   G +   FPLK D
Sbjct:   19 ALPVHSSEGGATIPVSFTQNNPNADGEDYNHIDHGVTQAPYERSFSPYDFNGGTTLAISGPDYAIVAADTRLSTGYQILSRNVTKLHELTSKCVLGSAGCKTDIDQLRSVLDINQKVYHHNHRKEMSTPSVAQMLGNTLYYKRFFPYYSFNVLAGVDKEGKGAVYSYDAIGSFERTPVTATGSGQSFLIPLLDNVIKHNNRNDEKRDLPAEEVVEIVKDAFVTAGERDIYTGDMLEIKVIRASGITNISFPLKAD 273          
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: A0A7S2N0R8_9STRA (Proteasome subunit beta n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2N0R8_9STRA)

HSP 1 Score: 317 bits (811), Expect = 4.650e-106
Identity = 156/253 (61.66%), Postives = 192/253 (75.89%), Query Frame = 0
Query:   10 AAPIWHSEGTKNVEVLSS----------GIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            A PI  SEG   + V  S           IDHGVT+  +ER +SPY+FNGGTTLAI+G DY VVAADTR+S+GY I+SRD TKLH LT KCV+ SAGCKTDV  L   LD+ M +Y HN  K M+TP+VAQML+NTLYY+RFFPYY+FNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ+++IPL+DN++  K R DEK    + + VE+VK+ FVTAGERDIYTGDAVEI VI+K+G   ++F LK D
Sbjct:   19 ALPIHSSEGDVTIPVSFSHGNNPNPHADDIDHGVTRATYERGFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRDVTKLHALTEKCVLGSAGCKTDVDQLRSVLDIKMKIYAHNHRKPMSTPSVAQMLSNTLYYKRFFPYYAFNVLAGVDAEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVIAHKNRCDEKRDLPSEEVVEIVKDAFVTAGERDIYTGDAVEIMVITKEGIKKEIFKLKAD 271          
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match: B8BSP9_THAPS (Proteasome subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSP9_THAPS)

HSP 1 Score: 314 bits (804), Expect = 7.310e-105
Identity = 147/231 (63.64%), Postives = 185/231 (80.09%), Query Frame = 0
Query:   22 VEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 252
            +++  S IDHG+TQ+P+ERR+SPY+FNGGTTLAI+G DY VVAADTR+S+GY I+SR+ +KLH LT KCV+ SAGCKTDV  L   LD+ M +Y HN  K MATP+VAQML NTLY +RFFPYYSFNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ ++IPL+DN++  K R D+K    + + VE+VK+ F+TAGERDIYTGDAVEI VI+  G  ++ F LK D
Sbjct:   50 LDIDGSNIDHGITQSPWERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRLDQKRELGSEEVVEIVKDAFLTAGERDIYTGDAVEIMVITAKGIESETFKLKAD 280          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYM7_ECTSI2.830e-17495.24Proteasome subunit beta n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC48_9STRA6.390e-13376.13Proteasome subunit beta n=1 Tax=Tribonema minus Ta... [more]
A0A7S2DDA1_9STRA8.020e-12069.14Proteasome subunit beta n=1 Tax=Dictyocha speculum... [more]
A0A7S2SKB7_9STRA7.340e-11665.99Proteasome subunit beta n=1 Tax=Rhizochromulina ma... [more]
A0A7S2FLM8_9STRA7.920e-11569.01Proteasome subunit beta n=1 Tax=Florenciella parvu... [more]
A0A7S2XWL8_9STRA1.110e-11262.60Proteasome subunit beta n=1 Tax=Fibrocapsa japonic... [more]
K0S6G4_THAOC5.220e-10866.38Proteasome subunit beta n=1 Tax=Thalassiosira ocea... [more]
A0A7S3PW57_9STRA3.510e-10660.39Proteasome subunit beta n=1 Tax=Chaetoceros debili... [more]
A0A7S2N0R8_9STRA4.650e-10661.66Proteasome subunit beta n=2 Tax=Lithodesmiaceae Ta... [more]
B8BSP9_THAPS7.310e-10563.64Proteasome subunit beta n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 48..237
e-value: 5.5E-34
score: 117.3
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 47..251
e-value: 7.7E-60
score: 203.8
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 44..247
IPR035202Proteasome subunit beta 1PANTHERPTHR11599:SF59PROTEASOME SUBUNIT BETA TYPE-1coord: 43..248
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 43..248
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 53..100
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 49..237
score: 42.367

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:560699..563826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.809.1mRNA_C-linearis_contig102.809.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 560604..565650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.809.1 ID=prot_C-linearis_contig102.809.1|Name=mRNA_C-linearis_contig102.809.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=253bp
MSQGPAPHSAAPIWHSEGTKNVEVLSSGIDHGVTQNPFERRWSPYDFNGG
TTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTD
VTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVL
CGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQD
EKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLK
KD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR035202Proteasome_beta1
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type