prot_C-linearis_contig102.800.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.800.1
Unique Nameprot_C-linearis_contig102.800.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length187
Homology
BLAST of mRNA_C-linearis_contig102.800.1 vs. uniprot
Match: D7FYL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL6_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 2.950e-39
Identity = 86/164 (52.44%), Postives = 107/164 (65.24%), Query Frame = 0
Query:   13 GVSLAQAQRVQALLQLGVTEQDVQIAERLMSTTPPGDPDNSPKIEWLLGYSVEQMSRLKALEVLGISSAMLEEEKARILGSLGVKAWGHPGSSAVIENPQDNVGSCVP--RKRRNTASEAPRVPAPTCGMASPSPS---EVAELEDECLSQHLRIQQLELQVAA 171
            G +  Q  RVQALL+LGVTE+DV++A  L+    P   +   K EWLL  S+EQMSRLKALE LG+S  MLEE++ RILG LG+  WG+PG S V      +  +C P  RKR++    A R      G+A P+     EVA+LEDECLSQHLRIQQLEL+VAA
Sbjct:    6 GATPQQVLRVQALLKLGVTEEDVRLAAELLR---PRTNNEGTKAEWLLSLSMEQMSRLKALEELGVSQDMLEEDRGRILGDLGIPRWGNPGDSMVDAERDSSTSACGPVFRKRQHIEGTAKR-----WGLAQPTRQKEVEVAKLEDECLSQHLRIQQLELEVAA 161          
BLAST of mRNA_C-linearis_contig102.800.1 vs. uniprot
Match: A0A6H5K919_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K919_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.620e-31
Identity = 68/120 (56.67%), Postives = 83/120 (69.17%), Query Frame = 0
Query:   55 KIEWLLGYSVEQMSRLKALEVLGISSAMLEEEKARILGSLGVKAWGHPGSSAVIENPQDNVGSCVP--RKRRNTASEAPRVPAPTCGMASPSPS---EVAELEDECLSQHLRIQQLELQV 169
            K EWLL  SVEQMSRLKALE LG+S AMLEE++ RILG+LG+  WG+PG S V      +  +C P  RKR++  + A R      G+A P+     EVA+LEDECLSQHLRIQQLEL+V
Sbjct:    2 KAEWLLSLSVEQMSRLKALEQLGVSQAMLEEDRGRILGNLGIPRWGNPGDSMVDTEQDSSTSTCGPIFRKRQHIEATAKR-----WGLAQPTRQMEVEVAKLEDECLSQHLRIQQLELEV 116          
BLAST of mRNA_C-linearis_contig102.800.1 vs. uniprot
Match: D7FYM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM0_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 2.690e-25
Identity = 73/166 (43.98%), Postives = 97/166 (58.43%), Query Frame = 0
Query:   13 GVSLAQAQRVQALLQLGVTEQDVQIAERLMSTTPPGDPDNSPKIEWLLGYSVEQMSRLKALEVLGISSAMLEEEKARILGSLGVKAWGHPGSSAVI-ENPQDNVGSCVPRKRRNTASEAPRVPAPTCGMASPSPSEVAELEDECLSQHLRIQQLELQVAALSLSES 177
            GV+  QA R QALL+LGVT++DV+IAERLM +   G  +   K EWLLG +  QMS  KAL+VLGIS A++EEE++R LG LG    G   S     +  +D  G    +KRR++  E           A+   S V +LE+ C +Q  RIQ+LE Q+A LS   S
Sbjct:   84 GVTQKQALRTQALLRLGVTDEDVRIAERLMGSRSEGADNTPSKEEWLLGVTYAQMSFHKALQVLGISEAVVEEERSRRLGELGSGGRGGGASECGAGQEAEDTCGRFFIKKRRSSIEELGTTLPGEVAFAN---SRVLQLEEVCHTQMTRIQELESQLAVLSARSS 246          
BLAST of mRNA_C-linearis_contig102.800.1 vs. uniprot
Match: A0A836CJU9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.780e-15
Identity = 57/148 (38.51%), Postives = 79/148 (53.38%), Query Frame = 0
Query:    5 ETALHTLSGVSLAQAQRVQALLQLGVTEQDVQIAERLMSTTPPGD---------------PDNSPKIEWLLGYSVEQMSRLKALEVLGISSAMLEEEKARILGSLGVKAWGHPGSSAVIENPQDNVGSCVPRKRRNTASEAPRVPAPT 137
            ET +    GVS+ Q +R QALL+LGVTE D+++AERL +  P G+               P    K E LLG +  ++S  KALEVLG+  A++EEE+AR LG LG +         + +   D+    V R+R    S APR P P+
Sbjct:   84 ETIMQKQFGVSMEQMKRTQALLRLGVTEDDLKVAERLFAELPGGEELRKARAEGVISPAIPRKLSKEERLLGLTKSEISFCKALEVLGVDMAIVEEERARRLGQLGQQRSSDAIGDVISD---DDSSESVLRRRALLPSPAPRAPTPS 228          
BLAST of mRNA_C-linearis_contig102.800.1 vs. uniprot
Match: D8LT43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT43_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 8.000e-11
Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = 0
Query:   13 GVSLAQAQRVQALLQLGVTEQDVQIAERLMSTTPPGDPDNSP-KIEWLLGYSVEQMSRLKALEVLGISSAMLEEEKARILGSLGVKAWGH 101
            G++L Q +RV+ALL++GV E+D++IA+RL+        D  P K E LLGY+ +Q  R+KAL +LG++    +  +A +L SLG  A+G+
Sbjct:    6 GMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYNSQQRQRMKALHILGLTEESFDRCRAVMLSSLGPSAFGY 95          
BLAST of mRNA_C-linearis_contig102.800.1 vs. uniprot
Match: A0A6H5KHW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW8_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.260e-9
Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = 0
Query:   13 GVSLAQAQRVQALLQLGVTEQDVQIAERLMSTTPPGDPDNSP-KIEWLLGYSVEQMSRLKALEVLGISSAMLEEEKARILGSLGVKAWGH 101
            G++L Q +RV+ALL++GV E+D++IA+RL+        D  P K E LLGY+ +Q  R+KAL +LG++    +  +A +L SLG  A+G+
Sbjct:  227 GMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYTSQQRQRVKALHILGLTEESFDRCRAVMLSSLGPSAFGY 316          
BLAST of mRNA_C-linearis_contig102.800.1 vs. uniprot
Match: B8BQR6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQR6_THAPS)

HSP 1 Score: 57.8 bits (138), Expect = 4.880e-7
Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 0
Query:   21 RVQALLQLGVTEQDVQIAERLMSTTPPGDPDNSPKIEWLLGYSVEQMSRLKALEVLGISSAMLEEEKARILGSLGVKAWGHPGSSAVIENPQDNVGSCVPRKRRNTASEAPRVPAPTCGM-ASPSPSEVAELEDECLSQHLRIQQLELQVAAL 172
            R + L +LGV+E+DVQ+A RLM   P    D + K E +LG++  +++R KAL +LG S   +E E A+ +G+LG+       S     N Q ++      + R   S   + P+ T       S +E+  L ++  +  + I+ L  ++  L
Sbjct:   19 RSKGLEKLGVSEEDVQLAARLMQQIPTCTSDPN-KAERILGFASSRLAREKALRLLGASEEEVEVENAKTMGALGIAGRRRSYSVMHSANQQHSLLLSKKSQLRKRTSSIVKSPSRTSAKHRRRSSAEIRMLRNQARTSAIEIESLRARIEEL 170          
BLAST of mRNA_C-linearis_contig102.800.1 vs. uniprot
Match: A0A836CFQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ6_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.040e-5
Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 0
Query:    5 ETALHTLSGVSLAQAQRVQALLQLGVTEQDVQIAERLMSTTPPGDPDNSPKIEWLLGYSVEQMSRLKALEVLGI--------------SSAMLEEEKARILGSLGVKAWGHPGSSAVIENPQDNVGS 117
            ET +    GVS+ Q +R QALL+LGVTE+D+++AERL +  P G+ +   K E LLG +  ++S  KALE + +              ++  +E   A  LGSLG+   G P ++     P  +  S
Sbjct:  502 ETVMGKYFGVSVEQMKRTQALLRLGVTEEDLRVAERLFAVLP-GNEELVSKEERLLGLTRSEISFYKALEGVRVQRCGACADDAVNPGANVEVEVAIAERLGSLGI--GGRPHTTKAKSTPSIDEAS 625          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FYL6_ECTSI2.950e-3952.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K919_9PHAE1.620e-3156.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYM0_ECTSI2.690e-2543.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJU9_9STRA1.780e-1538.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LT43_ECTSI8.000e-1142.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHW8_9PHAE1.260e-942.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B8BQR6_THAPS4.880e-729.41Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A836CFQ6_9STRA2.040e-534.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:502229..505401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.800.1mRNA_C-linearis_contig102.800.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 502210..506814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.800.1 ID=prot_C-linearis_contig102.800.1|Name=mRNA_C-linearis_contig102.800.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=187bp
MNLPETALHTLSGVSLAQAQRVQALLQLGVTEQDVQIAERLMSTTPPGDP
DNSPKIEWLLGYSVEQMSRLKALEVLGISSAMLEEEKARILGSLGVKAWG
HPGSSAVIENPQDNVGSCVPRKRRNTASEAPRVPAPTCGMASPSPSEVAE
LEDECLSQHLRIQQLELQVAALSLSESCTGKDKGQG*
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