prot_C-linearis_contig102.799.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.799.1
Unique Nameprot_C-linearis_contig102.799.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length375
Homology
BLAST of mRNA_C-linearis_contig102.799.1 vs. uniprot
Match: D7FYL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL7_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 1.350e-70
Identity = 161/321 (50.16%), Postives = 196/321 (61.06%), Query Frame = 0
Query:    7 KSGPRPTTLDAALLHNEALQEKVQSLE--------------GRLKTAIRDLNGAKKNAKFDKIALEGRTKTALVLEHTVATLRHDLQTNVERRQKVQEKMATIERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAEATEGKWLAAEKTVLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSEVFELKRILLTRDGEISEERASTSNLRRELSRVRRDFILSTSNRSEQQSALIGSRRRGKRAANAWTPRSRRNSG-----------LSRLEQS-ALQGARDMVSWDDVFMAKIK-----AENGRHSTGLIQSS 296
            + G   T L  AL  NEAL+++VQ+ +              G L  A R+L  AKK+AKFD +A EGRTK   +LEHTVATLRHDL TNVERRQKV+EK+AT+ERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAE  EG+WL +EK    L                                   R E+F+LK++LL R+GEIS   ++ ++LRRELSRVRR+FI+STSNRSEQQSAL+GSRRRG  +     P   R+S            L R E S ALQ AR  VSWD+VFM K         + R+S+GL +S+
Sbjct:   18 EDGDVATDLHVAL-QNEALEDQVQAFQEALEVKEERLRTIAGELTAARRELERAKKSAKFDLVAAEGRTKKLGILEHTVATLRHDLHTNVERRQKVEEKVATLERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAEDVEGRWLESEKRAQVLEVKVEQKIHELESQSRVNAAQAGEIEAQAAEIELHRKEIFDLKQVLLAREGEISTGCSTATDLRRELSRVRREFIMSTSNRSEQQSALLGSRRRGISSQRRRHPD--RDSSTKELIAGGGHDLCRKENSRALQKAR--VSWDNVFMTKADQSAETVSDHRNSSGLNKSN 333          
BLAST of mRNA_C-linearis_contig102.799.1 vs. uniprot
Match: A0A6H5JZF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF3_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 4.380e-46
Identity = 150/385 (38.96%), Postives = 199/385 (51.69%), Query Frame = 0
Query:   23 EALQEKVQSLEGRLKTAIRDLNGAKKNAKFDKIALEGRTKTALVLEHTVATLRHDLQTNVERRQKVQEKMATIERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAEATEGKWLAAEKTVLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSEVFELKRILLTRDGEISEERASTSNLRRELSRVRRDFILSTSNRSEQQSALIGSRRRGKRAANAWTPRSRRNSG-----------LSRLEQS-ALQGARDMVSWDDVFMAKIK-----AENGRHSTGLIQSSG------------------GKQARRQAQDGGV-GTGWKEESFALMSRRGEMPTLDPGSTLLVEGSLFVGNGLGVKKTPTVVAGGSAKNMCRKIV 371
            E  +E+++++ G L    ++L  AKK+AKFD +A EGRTK   +LEHTVATL HDLQTNVERR    EK A +      ++   L+   R +A           A+A E +  AAE                                         R E+ +LK+     +GEIS  R++ ++LRRELSRVRR+FI+STSNRSEQQSAL+GSRR+G  +     P   R+S            L R E S ALQ AR  VSWD+VFM K         + R ++GL +S+                   G+     + D  + GTG KE++    SRRG  P + PGSTLLV GSLF+GNGLGVKK PT  +GGSAK+M + I+
Sbjct:   47 EVKEERLRTITGMLTATRKELERAKKSAKFDLVAAEGRTKKLGILEHTVATLHHDLQTNVERRWLESEKRAQVLEEKVEQKIHELESQSRVNA-----------AQAGEIEAQAAE-------------------------------------IEFHRKEILDLKQ-----EGEISTGRSTATDLRRELSRVRREFIMSTSNRSEQQSALLGSRRKGISSQRRRHPD--RDSSTKELVAGGGHDLCRKENSRALQKAR--VSWDNVFMTKEDQSAETVSDHRSNSGLNKSNAREIEKPIFRHVSHSSPPVGRDNTTSSADANLDGTGRKEQALQ-QSRRGHKP-IPPGSTLLVAGSLFIGNGLGVKKAPTAFSGGSAKDMLKNIM 372          
BLAST of mRNA_C-linearis_contig102.799.1 vs. uniprot
Match: A0A835YZX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.820e-6
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 0
Query:   10 PRPTTLDAALLHNEA----LQEKVQSLEGRLKTAIRDLNGAKKNAKFDKIALEGRTKTALVLEHTVATLRHDLQTNVERRQKVQEKMATIERSWQNERSLRLQDLHRHDAMSSDTKHAEKVAEATEGKWLAA 137
            P    L A L+ + A    L+ ++Q  EG +K        A  NAK+D++A E   +  ++ EH V   + +++    R   +Q +   ++R+WQ+ER+ RLQDLHRH A+S++ +     A   E +  AA
Sbjct:   26 PDVGALQAELVDSRARQAELEYRLQLSEGLVKEWQARAERALNNAKYDQMAREAHARKLILAEHEVGGAKAEIEELRTRITALQSEARALQRAWQDERAQRLQDLHRHAALSAEAERLRGAARDAEARAAAA 157          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYL7_ECTSI1.350e-7050.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZF3_9PHAE4.380e-4638.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YZX7_9STRA5.820e-631.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 15..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:498887..502051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.799.1mRNA_C-linearis_contig102.799.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 498762..502092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.799.1 ID=prot_C-linearis_contig102.799.1|Name=mRNA_C-linearis_contig102.799.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=375bp
MADKRGKSGPRPTTLDAALLHNEALQEKVQSLEGRLKTAIRDLNGAKKNA
KFDKIALEGRTKTALVLEHTVATLRHDLQTNVERRQKVQEKMATIERSWQ
NERSLRLQDLHRHDAMSSDTKHAEKVAEATEGKWLAAEKTVLQLEKTLEK
RARELESQSRINAAQAGEIVALATEVELLRSEVFELKRILLTRDGEISEE
RASTSNLRRELSRVRRDFILSTSNRSEQQSALIGSRRRGKRAANAWTPRS
RRNSGLSRLEQSALQGARDMVSWDDVFMAKIKAENGRHSTGLIQSSGGKQ
ARRQAQDGGVGTGWKEESFALMSRRGEMPTLDPGSTLLVEGSLFVGNGLG
VKKTPTVVAGGSAKNMCRKIVGEQ*
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