prot_C-linearis_contig102.786.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig102.786.1
Unique Name	prot_C-linearis_contig102.786.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	121

Homology

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BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 1.830e-29
Identity = 53/113 (46.90%), Postives = 71/113 (62.83%), Query Frame = 0

Query:    1 MPANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHW 112
            +P NR++  YP GG+  GVQ+ SWCD  +   W+   +  RP   S   Q   IL LDDFKCHKD+ F  +L  +A T  + IPGGLTP++QPLDR +NK  KR +R  YT++
Sbjct:  141 LPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253

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BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: A0A6H5JB72_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB72_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 3.810e-28
Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 0

Query:    1 MPANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPGASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWV 113
            +PANRT+F YP  G+  GVQ+ +WCD  +   WL+E +             SIL LDDF+CH+ E+F + L  +  T  ++IPGGLTP+ QPLDR +NKE KR MR +YT ++
Sbjct:  360 LPANRTKFGYPVSGMSFGVQEKNWCDARECILWLSESW-------------SILVLDDFRCHRSESFIEDLRRRTNTIVILIPGGLTPLFQPLDRMLNKEMKRLMRGRYTQYM 459

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BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 5.720e-28
Identity = 54/110 (49.09%), Postives = 71/110 (64.55%), Query Frame = 0

Query:    2 PANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 110
            PANR + D+PA G+  GVQ+ SW D  + + W++  +  RP   S   Q   IL LDDFKCHKDE +   L   A T  ++IPGGLTP++QPLDR +NK+ KR +R KYT
Sbjct:  204 PANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYT 313

[Close]

BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.470e-27
Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 0

Query:    1 MPANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 110
            +PANR++   P GG+  GVQ+ SWCD  +   W+ + +  RP   S   Q   IL LDDFKCHKD+ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R  YT
Sbjct:  316 LPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT 426

[Close]

BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.540e-27
Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 0

Query:    1 MPANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 110
            +PANR++   P GG+  GVQ+ SWCD  +   W+ + +  RP   S   Q   IL LDDFKCHKD+ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R  YT
Sbjct:  323 LPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT 433

[Close]

BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 8.530e-27
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0

Query:    3 ANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRA 107
            ANRT+F YP  G+   VQ+ SWCD  +   WL+E +  RP   S   Q  SIL LDDF+CH+ E+F + L  +  T  ++IPGGLTP++QPLDR +NKE KR MR 
Sbjct:  274 ANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRG 379

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BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 4.900e-26
Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 0

Query:    2 PANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 110
            P NR +  +PA G+  GVQ+ SW D  + + W +  +  RP   S   Q   IL LDDFKCHKDE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R+KYT
Sbjct:  138 PTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYT 247

[Close]

BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 5.150e-26
Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 0

Query:    2 PANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 110
            PANR +  +PA G+  GVQ+ SW D  + + W++  +  RP   S   Q   IL LDDFKCH DE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT
Sbjct:  399 PANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYT 508

[Close]

BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: A0A6H5K3D3_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D3_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 7.370e-26
Identity = 51/107 (47.66%), Postives = 68/107 (63.55%), Query Frame = 0

Query:    1 MPANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMR 106
            +PANR++   P GG+  GVQ+ SWCD  +   W+ + +  RP   S   Q   IL LDDFKCHKD+ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R
Sbjct:   50 LPANRSKHGVPVGGMSFGVQEESWCDLRECKVWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLR 156

[Close]

BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 8.930e-26
Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 0

Query:    2 PANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 110
            PANR +  +PA G+  GVQ+ SW D  + + W++  +  RP   S   Q   IL LDDFKCHKDE F   L   A T  + IPG LTP++QPLDR +NK+ KR +R KYT
Sbjct:  204 PANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYT 313

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot

BLAST of mRNA_C-linearis_contig102.786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FXD3_ECTSI	1.830e-29	46.90	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JB72_9PHAE	3.810e-28	46.02	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JUK2_9PHAE	5.720e-28	49.09	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KE45_9PHAE	2.470e-27	47.75	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KRZ1_9PHAE	2.540e-27	47.75	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5K583_9PHAE	8.530e-27	50.00	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KII4_9PHAE	4.900e-26	48.18	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JHT8_9PHAE	5.150e-26	48.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3D3_9PHAE	7.370e-26	47.66	C3H1-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5K6L9_9PHAE	8.930e-26	48.18	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004875	DDE superfamily endonuclease domain	PFAM	PF03184	DDE_1	coord: 19..116 e-value: 2.6E-11 score: 43.5
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 10..113
None	No IPR available	PANTHER	PTHR19303:SF23	POGO TRANSPOSABLE ELEMENT WITH KRAB DOMAIN	coord: 10..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig102	contig	C-linearis_contig102:357614..357976 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig102.786.1	mRNA_C-linearis_contig102.786.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig102 357279..357976 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig102.786.1 ID=prot_C-linearis_contig102.786.1|Name=mRNA_C-linearis_contig102.786.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=121bp
MPANRTQFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPGASGFSQP
ASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKE
FKRGMRAKYTHWVKDEFDRNG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004875	DDE_SF_endonuclease_dom