prot_C-linearis_contig102.784.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.784.1
Unique Nameprot_C-linearis_contig102.784.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length61
Homology
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BLAST of mRNA_C-linearis_contig102.784.1 vs. uniprot
Match: D7FSJ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ9_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 8.820e-24
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:    1 MGASYSLVGVSYHLALGAGSRNHFASQMRLRGRWHTYDCLDGGVVTSFDNFDPAWNASSPH 61
            MGA+YSLVGVSYH+A G   +NHF +Q+R+RGRWH YDCL GG +TS D FD  WN+SS +
Sbjct:    1 MGAAYSLVGVSYHIAHGGSRKNHFVTQLRVRGRWHKYDCLAGGAITSSDTFDADWNSSSQY 61
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BLAST of mRNA_C-linearis_contig102.784.1 vs. uniprot
Match: D7G7U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U5_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 1.210e-22
Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 0 
Query:    1 MGASYSLVGVSYHLALGAGSRNHFASQMRLRGRWHTYDCLDGGVVTSFDNFDPAWNASS 59
            MGA+YSLVGVSYH+A G   +NHF +Q+R+RGRWH YDCL GG VTS D FD  WN+SS
Sbjct:    1 MGAAYSLVGVSYHIAHGGSRKNHFVTQLRVRGRWHKYDCLAGGAVTSTDTFDADWNSSS 59
[Close]
BLAST of mRNA_C-linearis_contig102.784.1 vs. uniprot
Match: A0A6H5KDI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI5_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.240e-17
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0 
Query:    1 MGASYSLVGVSYHLALGAG-SRNHFASQMRLRGRWHTYDCLDGGVVTSFDNFDPAWNASSPH 61
            MG +YSLVG+S  LALG G +RNHF SQ+ +RGRWH  DCL GG+VTS D F   W+ SS H
Sbjct:  102 MGVTYSLVGISCFLALGGGPNRNHFVSQVWIRGRWHKDDCLQGGIVTSSDAFGSGWHVSSVH 163
[Close]
BLAST of mRNA_C-linearis_contig102.784.1 vs. uniprot
Match: A0A6H5KPV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV6_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 3.430e-6
Identity = 20/32 (62.50%), Postives = 23/32 (71.88%), Query Frame = 0 
Query:   30 LRGRWHTYDCLDGGVVTSFDNFDPAWNASSPH 61
            L GRWH YDCL GG+VTS D +D  W+ SS H
Sbjct:  574 LCGRWHKYDCLQGGIVTSSDAYDSGWHVSSVH 605
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FSJ9_ECTSI8.820e-2463.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G7U5_ECTSI1.210e-2267.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDI5_9PHAE2.240e-1761.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPV6_9PHAE3.430e-662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:274166..274348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.784.1mRNA_C-linearis_contig102.784.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 274166..274348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.784.1 ID=prot_C-linearis_contig102.784.1|Name=mRNA_C-linearis_contig102.784.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=61bp
MGASYSLVGVSYHLALGAGSRNHFASQMRLRGRWHTYDCLDGGVVTSFDN
FDPAWNASSPH
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