prot_C-linearis_contig102.787.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.787.1
Unique Nameprot_C-linearis_contig102.787.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length646
Homology
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BLAST of mRNA_C-linearis_contig102.787.1 vs. uniprot
Match: A0A6H5JRB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 8.980e-18
Identity = 90/120 (75.00%), Postives = 101/120 (84.17%), Query Frame = 0 
Query:  313 LLQHSAEYESSTNSYGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDASGLCRASLANLDEVAGQGQLRAIIWLSDRGARASTLAVDRAASAGHADVVDYLLRNRHE 432
            +L H A +  S+N+YGLA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL  SG+CRASLANLDEVA +GQLRA+IWL++R ARAST AVDRAA AGH   V+YLL +R E
Sbjct:  100 MLDHKAHHRCSSNAYGLAASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHDSGICRASLANLDEVAREGQLRALIWLNERDARASTSAVDRAAEAGHLGTVEYLLHHRRE 219
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BLAST of mRNA_C-linearis_contig102.787.1 vs. uniprot
Match: D7FH20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH20_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.970e-17
Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 0 
Query:  373 ASGLCRASLANLDEVAGQGQLRAIIWLSDRGARASTLAVDRAASAGHADVVDYLLRNRHE 432
            ASG+CRASLANLDEVA +GQLRA+IWLS+RGARAST AVDRAA AGH   V+YLL +R E
Sbjct:  208 ASGICRASLANLDEVAREGQLRALIWLSERGARASTSAVDRAAEAGHLGTVEYLLHHRRE 267
[Close]
BLAST of mRNA_C-linearis_contig102.787.1 vs. uniprot
Match: F4PPW9_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PPW9_CAVFA)

HSP 1 Score: 59.3 bits (142), Expect = 1.310e-5
Identity = 40/107 (37.38%), Postives = 54/107 (50.47%), Query Frame = 0 
Query:  384 LDEVAGQGQLRAIIWLSDRGARASTLAVDRAASAGHADVVDYLLRNRHEGCSPEALVGAAGRGHLAVVKLLRELRPEQCGGCLSARAVAAAAGHSEVARWLDESDPE 490
            LD  A  G L+ + +L +     S +A+D AA  G+  VVDYLL NR EGCS EA+   A  G L +++ L       C    S RA+  AA +  V  WL  +  E
Sbjct:  176 LDLAASNGHLQVVEYLHNEKYGCSVVALDFAAKRGYHHVVDYLLDNRTEGCSSEAIDQVACTGDLEMIQKLHFRAKAPC----SYRAMNNAAKYLNVVEWLSNNRQE 278
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRB1_9PHAE8.980e-1875.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH20_ECTSI1.970e-1776.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F4PPW9_CAVFA1.310e-537.38Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 132..291
e-value: 1.3E-16
score: 62.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 401..502
e-value: 1.3E-7
score: 33.0
coord: 294..390
e-value: 9.2E-10
score: 40.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 158..484
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 160..238
e-value: 1.6E-7
score: 31.8
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 119..344
coord: 322..491
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 616..636
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..615
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 637..645
NoneNo IPR availableTMHMMTMhelixcoord: 614..636

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:364942..373994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.787.1mRNA_C-linearis_contig102.787.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 363959..374634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.787.1 ID=prot_C-linearis_contig102.787.1|Name=mRNA_C-linearis_contig102.787.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=646bp
MSTAPPTEESAELALVALFSQVMQTAELFSACMAYQDGVKTALYEDGDVA
SANGHLSLLRLRRALRRKGKGKRGEGEAGVGNTRSIKAGASGRCSLSTTN
ITRSAKERTSNSTAEVSEGGKQASVAAEEGHADGNEGDAKQDEGVPLLED
LRFSHLAVDWAAAQGHLAVVRWLLENRGEGCTESAVDGACWNGHEETVRW
LMCEWRQPGSERALDYAASTGRLELVKWLSRQRGSRCTVAAMDGAAGGGY
LEVVRWLAANRREGSSAAAFELASAAGHLDVITWLDEAGFLCCSSAGWDN
AAEGGHLHVLKWLLQHSAEYESSTNSYGLAASRGHLEVCKWLRETMPDLR
CPVWAAETAAAAEYLEVVSWLDASGLCRASLANLDEVAGQGQLRAIIWLS
DRGARASTLAVDRAASAGHADVVDYLLRNRHEGCSPEALVGAAGRGHLAV
VKLLRELRPEQCGGCLSARAVAAAAGHSEVARWLDESDPELLRALEAAVV
TESSSSNSNSSSSDSDEGSADQAAYDDETSFFSALGSSKSSGIGDGRPSD
RAAESEANLFSDLSSRNSKGGEDPDGATKFDEGVSEVHVGDQARRGGIDA
EVMKAGGILRQAGGTLAFLLGAGVAVVFLFMVAIGWSPSLLTQGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom