prot_C-linearis_contig101.763.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.763.1
Unique Nameprot_C-linearis_contig101.763.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length171
Homology
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: D7FJK6_ECTSI (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK6_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 6.810e-88
Identity = 133/171 (77.78%), Postives = 148/171 (86.55%), Query Frame = 0
Query:    1 DLPATQNTRVGGLGASNHEEMESDNMATPRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPFC 171
            D  A +N+R+GGLG SN  E +S N A      F+LCS FV+ EGR +KP+FGFNGLGELVYQRTYARYLG+DT+++EQWYQTIERVVNGTFSMQKEWM SRGM W+E+E QSTAQEMYRRMFA KFLPPGRGLWAMGSKLTTERRLYAALNNCAFVST+DLA DPTAPFC
Sbjct:   12 DTAAARNSRIGGLGTSNDAEAKSSNTA------FQLCSQFVDREGRGSKPQFGFNGLGELVYQRTYARYLGEDTDDREQWYQTIERVVNGTFSMQKEWMLSRGMRWDEQEAQSTAQEMYRRMFAFKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTRDLASDPTAPFC 176          
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: A0A835YMD1_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD1_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.800e-59
Identity = 90/123 (73.17%), Postives = 110/123 (89.43%), Query Frame = 0
Query:   49 KPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPFC 171
            +P FGFNGLGELVY+RTY+RY+ +D++ KE+WYQT++RVVNGTFSMQKEW  + G+PW+E+  Q+ AQ+MY R+F MKFLPPGRGLWAMGSKLTTERRL+AALNNCAFVST ++AEDPT PFC
Sbjct:   35 RPPFGFNGLGELVYRRTYSRYVNEDSDVKEEWYQTVQRVVNGTFSMQKEWTLTGGLPWSEDAAQAEAQDMYTRIFNMKFLPPGRGLWAMGSKLTTERRLFAALNNCAFVSTANMAEDPTGPFC 157          
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: A0A3L6V3B6_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V3B6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 2.100e-55
Identity = 100/171 (58.48%), Postives = 118/171 (69.01%), Query Frame = 0
Query:   10 VGGLGASNHEEMESD------NMATP-RAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAE--DPTAPFC 171
            V GL   N     +D      N ATP R   FRL + FV+S  +   P FGFNGLGELVY RTY+R   D T  KEQWY+T+ERVVNGT++MQK W+  RG+ WN  E   +A+EMYRR+FAMKFLPPGRGLWAMGS +T ER+LYAALNNCAFVST+D+     P  PFC
Sbjct:   24 VDGLSEDNSHGFANDFIPLFRNEATPKREKKFRLSNKFVDSF-KDVPPPFGFNGLGELVYMRTYSRDKADGT--KEQWYETVERVVNGTYNMQKHWLEHRGLGWNGREAHRSAREMYRRIFAMKFLPPGRGLWAMGSPITEERKLYAALNNCAFVSTEDVDRRFSPAEPFC 191          
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: A0A835ZHW0_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW0_9STRA)

HSP 1 Score: 191 bits (486), Expect = 5.500e-54
Identity = 91/147 (61.90%), Postives = 110/147 (74.83%), Query Frame = 0
Query:   25 NMATPRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPFC 171
            N +  + +AF L   FV    +A  P FGFNGLGE VY+RTY+RYL    + +E W+QT++RVVNGTFSMQKEW+ +    W+E   Q  AQEMY R+F MKFLPPGRGLWAMG+ LTT+RRLYAALNNCAFVST D+ +DPTAPFC
Sbjct:   26 NSSGVKELAFALEPSFVAKWSKATPP-FGFNGLGEFVYRRTYSRYLHGGDDAREVWFQTVQRVVNGTFSMQKEWLITEHRCWDEAAAQRDAQEMYERIFNMKFLPPGRGLWAMGTALTTQRRLYAALNNCAFVSTADMQDDPTAPFC 171          
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: A0A7R9UQG7_DIALT (Ribonucleoside-triphosphate reductase (thioredoxin) (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQG7_DIALT)

HSP 1 Score: 176 bits (446), Expect = 2.210e-52
Identity = 86/142 (60.56%), Postives = 104/142 (73.24%), Query Frame = 0
Query:   29 PRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPF 170
            P  + FRL   FV+S   + +P FGFNGLG+LVY+RTYAR   D    +EQW +T+ERVVNGTF+MQK W+    + WNE E Q  AQ+MY R+F MKFLPPGRGLWAMGS +T ERRL+AALNNCAFVST++L  D   PF
Sbjct:   44 PGYVPFRLPDAFVDSYA-SREPAFGFNGLGKLVYERTYARPTAD--GGREQWLETVERVVNGTFNMQKRWIEESDLGWNEREAQEVAQDMYERIFTMKFLPPGRGLWAMGSPITEERRLFAALNNCAFVSTENLPTDFAGPF 182          
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: W7T512_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T512_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.210e-51
Identity = 88/137 (64.23%), Postives = 106/137 (77.37%), Query Frame = 0
Query:   34 FRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPF 170
            FRL   FV  +     P FGFNGLGELVY+RTY+R   D  + +E+W++T+ RVVNGTFSMQKEW+  + + W+EE  Q  AQEMYRR+F MKFLPPGRGLWAMG+ LT +RRLYAALNNC FVSTQD+A DP+APF
Sbjct:  208 FRLDPSFVQ-QWEDEDPPFGFNGLGELVYRRTYSRMKADGEH-RERWFETVGRVVNGTFSMQKEWLLRQSLEWDEERAQGLAQEMYRRIFEMKFLPPGRGLWAMGTTLTEDRRLYAALNNCGFVSTQDMANDPSAPF 342          
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: A0A662XT11_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XT11_9STRA)

HSP 1 Score: 180 bits (457), Expect = 4.950e-50
Identity = 90/145 (62.07%), Postives = 104/145 (71.72%), Query Frame = 0
Query:   29 PRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAE--DPTAPFC 171
            P    FRL S FV    +   P FGFNGLGELVY RTY+R   D T  KE+W++T+ERVVNGTF+MQK+W+   G PWNE+E   TA+EMY R+F MKF PPGRGLWAMGS +T ER LYAALNNCAFVST D+ E   P  PFC
Sbjct:   58 PGYKQFRLDSRFVAGFAQITPP-FGFNGLGELVYMRTYSRVKADGT--KERWFETVERVVNGTFNMQKKWLQQLGQPWNEQEMTHTAEEMYTRIFYMKFTPPGRGLWAMGSPITEERGLYAALNNCAFVSTADILELDTPAEPFC 199          
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: A0A485L5Q2_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485L5Q2_9STRA)

HSP 1 Score: 180 bits (457), Expect = 6.510e-50
Identity = 90/144 (62.50%), Postives = 105/144 (72.92%), Query Frame = 0
Query:   30 RAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAE--DPTAPFC 171
            R   FRL   FV S  +   P FGFNGLGELVY RTY+R   D T  KEQWY+T+ERVVNGT++MQK W+  RG+ WN  E   +A+EMYRR+F MKFLPPGRGLWAMGS +T ER+LYAALNNCAFVST+D+     P  PFC
Sbjct:   91 REKKFRLSKKFVESF-KDVPPPFGFNGLGELVYMRTYSRDKADGT--KEQWYETVERVVNGTYNMQKHWLEHRGLGWNGHEAHRSAREMYRRIFDMKFLPPGRGLWAMGSPITEERKLYAALNNCAFVSTEDVDRRFSPAEPFC 231          
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: F1A3P6_DICPU (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A3P6_DICPU)

HSP 1 Score: 180 bits (456), Expect = 7.730e-50
Identity = 83/137 (60.58%), Postives = 108/137 (78.83%), Query Frame = 0
Query:   34 FRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAEDPTAPF 170
            F+L   F+  E R  K +FGF  LGE+VY+RTY+R +  DTN  E+WY+T+ERVVNGT++MQK W+ S G+ WN+ + QS+AQEMYR++F MKFLPPGRGLWAMGS +T ++ LYAALNNCAFVST D+ ++PT PF
Sbjct:   66 FKLNDQFIE-EYRKKKAKFGFGILGEIVYRRTYSR-VKPDTNTNEKWYETVERVVNGTYNMQKRWIESHGLSWNDTKAQSSAQEMYRKIFEMKFLPPGRGLWAMGSPITEKKGLYAALNNCAFVSTMDMKDNPTKPF 200          
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Match: A0A329SLK2_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SLK2_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.030e-49
Identity = 89/145 (61.38%), Postives = 101/145 (69.66%), Query Frame = 0
Query:   29 PRAMAFRLCSHFVNSEGRANKPRFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMFSRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAALNNCAFVSTQDLAE--DPTAPFC 171
            P    F L   FV S      P FGFNGLGELVY RTY+R   D T  KE+W++TIERV+NGTF+MQK+W    G PWNEEE    AQEMY R+F MKF PPGRGLWAMGS +T +R LYAALNNCAFVST D+ E   P+ PFC
Sbjct:   52 PDYKPFTLDKAFVASFENQTPP-FGFNGLGELVYMRTYSRVKADGT--KERWFETIERVINGTFNMQKKWSQQLGQPWNEEEINHIAQEMYTRVFQMKFTPPGRGLWAMGSPITEDRGLYAALNNCAFVSTADILELKTPSEPFC 193          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK6_ECTSI6.810e-8877.78Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A835YMD1_9STRA1.800e-5973.17Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A3L6V3B6_9STRA2.100e-5558.48Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A835ZHW0_9STRA5.500e-5461.90Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A7R9UQG7_DIALT2.210e-5260.56Ribonucleoside-triphosphate reductase (thioredoxin... [more]
W7T512_9STRA2.210e-5164.23Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A662XT11_9STRA4.950e-5062.07Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A485L5Q2_9STRA6.510e-5062.50Ribonucleoside-triphosphate reductase (thioredoxin... [more]
F1A3P6_DICPU7.730e-5060.58Ribonucleoside-triphosphate reductase (thioredoxin... [more]
A0A329SLK2_9STRA1.030e-4961.38Ribonucleoside-triphosphate reductase (thioredoxin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.70.20coord: 31..169
e-value: 2.2E-28
score: 101.0
NoneNo IPR availablePANTHERPTHR43371FAMILY NOT NAMEDcoord: 61..165
NoneNo IPR availableSUPERFAMILY51998PFL-like glycyl radical enzymescoord: 54..161
IPR040763Ribonucleotide reductase, alpha helical domainPFAMPF17975RNR_Alphacoord: 38..139
e-value: 3.1E-36
score: 123.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:594769..596331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.763.1mRNA_C-linearis_contig101.763.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 594767..596331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.763.1 ID=prot_C-linearis_contig101.763.1|Name=mRNA_C-linearis_contig101.763.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=171bp
DLPATQNTRVGGLGASNHEEMESDNMATPRAMAFRLCSHFVNSEGRANKP
RFGFNGLGELVYQRTYARYLGDDTNEKEQWYQTIERVVNGTFSMQKEWMF
SRGMPWNEEETQSTAQEMYRRMFAMKFLPPGRGLWAMGSKLTTERRLYAA
LNNCAFVSTQDLAEDPTAPFC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040763RNR_alpha_hel