prot_C-linearis_contig101.760.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.760.1
Unique Nameprot_C-linearis_contig101.760.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length299
Homology
BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: D7G9G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G4_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 3.370e-122
Identity = 180/207 (86.96%), Postives = 187/207 (90.34%), Query Frame = 0
Query:   91 QPSLAAEAMATEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRLEGLVVDGVRLGA 297
            QPS AAE  ATEFVDF DSRGLF CRIPKNFLRAER KDKRGTVFVAGDYSKAEV+SVQVV  FDLL DAGLPTIGDLTKWENVGKP  +ADLLKQRRDSDAAGG  VES VLPG T+DG VLQF LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALN DW+QEGGAK+RLKVA DSFRLEGL+VDGVRLGA
Sbjct:   32 QPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGA 238          
BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A6H5KHB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB6_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 2.950e-119
Identity = 177/206 (85.92%), Postives = 186/206 (90.29%), Query Frame = 0
Query:   92 PSLAAEAMATEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRLEGLVVDGVRLGA 297
            PS AAE  ATEFVDF DSRGLF C IPKNFLRAER KDKRGTVFVAGDYSKAEV+SVQVV AFDLL DAGLPT+GDLTKWENVGKP  +ADLLKQRRDSDAAGG  VES VLPG T+DG VLQF LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALN DW+QEGGAK+RLKVA DSFRLEGL+V+GVRLGA
Sbjct:   97 PSSAAEVAATEFVDFEDSRGLFSCLIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKAFDLLTDAGLPTVGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVEGVRLGA 302          
BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A835Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 9.990e-48
Identity = 107/236 (45.34%), Postives = 138/236 (58.47%), Query Frame = 0
Query:   58 AQVDTMDRARFLRRTAATSVAALAGGLAAPSGLQPSLAAEAMATEFVDFVDSRGLFGCRIPKNFLRAERPKDK--RGTVFVAGDYSKAEVMSVQVVTAFDLLKDAG-----LPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATV-DGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRL 285
            A    +DR RF   TA+    A+AG L  P   QP++A          + DSRG F   +P N++RAER  D+  +G +FV G+Y KA  +SV ++ +  LL+DAG     LPT  DLT W  VG P  +A LL  RRD DAA     +S VLP   V DG  L F +K+ + V R DLLEKE+GV ELYR TY KA+MRGDG+FL+ WAGALN +W +   A++ L     SF L
Sbjct:    4 AAASAIDRRRFAAGTAS----AIAGVLLLP---QPTVAE---VPSLAAYSDSRGYFEISLPANWVRAERKGDQEAKGVLFVTGNYVKAITLSVAIIKSSQLLRDAGTAPLVLPT-DDLTTWAGVGTPMGIAKLLAFRRDQDAAQAAAQDSEVLPDTVVLDGNALTFMIKTRVPVQRPDLLEKERGVRELYRLTYGKALMRGDGTFLLCWAGALNTEWGEPTNARDTLAAVVASFHL 228          
BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A7S0QY41_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QY41_9CRYP)

HSP 1 Score: 123 bits (309), Expect = 3.000e-30
Identity = 75/177 (42.37%), Postives = 99/177 (55.93%), Query Frame = 0
Query:   96 AEAMATEFVDFVDSRGL---FGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGAT-VDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQ 268
            A+A   E+  F +  GL   F   IPK F +++RP    GT+FVAG    AE++SVQ+V+   LL D G+   GDL+ WE +G    +ADLL   RD DA     + S V P +  V G  L F   + I V R D L + QG+SEL R T  +A +R DG+ LVLWA AL  DW +
Sbjct:   63 ADAEVYEYSAFKEDGGLDAVFRADIPKEFFKSKRPLTN-GTIFVAGSLQTAEIVSVQIVSIPQLLADIGVLPTGDLSTWEAIGSAKAIADLLTSNRDGDAKQRGGLASKVDPASVAVSGRTLSFRTAATIAVQRPDKLLETQGISELRRITRARAEIRRDGTALVLWASALEQDWNK 238          
BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: K0RXZ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXZ5_THAOC)

HSP 1 Score: 113 bits (282), Expect = 5.940e-26
Identity = 81/213 (38.03%), Postives = 116/213 (54.46%), Query Frame = 0
Query:   95 AAEAMATEFVD-----FVDSRG--LFGCRIPKNFLRAER------PKDKRG------TVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATV----DGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRG-DGSFLVLWAGALNMDWEQEGGAKERLKVAADSF 283
            A++A+A E  D     FVD+    LF   +P+ F    R      P +K G      T+F AGD SKAEV++V+      LL++ G   +GDL+ +E +G PT +A LL +RR+ D  G + V  AVL   +V    DG  L+FT+K  I V + +LL +E GVS L+R T  KA +   DG+ LV++A AL+ D+    G    L+   DSF
Sbjct:   60 ASKALAEEATDVPMKLFVDTANPSLFAINVPQRFFAIRRSAKGDLPDEKTGKGRRGGTIFSAGDMSKAEVVAVERFPVKVLLEEEGYSPLGDLSTFEAIGDPTAIATLLLRRREKDRPGNVSV--AVLDKDSVVVTEDGKTLKFTMKQEISVQKPELLMEEMGVSRLFRTTVAKATLSSNDGNLLVVFASALDQDFSGPDGVA--LRKTVDSF 268          
BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A7S2MYB7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MYB7_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 9.880e-13
Identity = 59/200 (29.50%), Postives = 98/200 (49.00%), Query Frame = 0
Query:  107 VDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKD-------AGLPTIGDLTK------WENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMR----GDGS----FLVLWAGALNMDWEQEGGAKERLKVAADSFRL 285
            +D+   F   IP +F+ ++R K   GT+FVAG++ +A V+SV       LL+D        GLP    + +      + ++G    VA LL + RD DA+ G    +  L   + DG+ L+F   + + V   D LE+++GV +L R T   +++     GDG+       +W  AL  DW+++   K  L+    SF +
Sbjct:   45 LDAASRFALDIPDDFVVSKR-KAVTGTLFVAGNFPRASVISVTAWPLDALLQDDARSRALPGLPQELVIAEHATPLSFTDIGSAKSVAQLLLRARDRDASSGALQSALTLSQLSSDGSRLEFECATELPVSDPDALEEQRGVRQLIRRTRAASVLGSVPGGDGAPVPALFSVWGSALEQDWDKD--LKAPLEKTVSSFSV 241          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G9G4_ECTSI3.370e-12286.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHB6_9PHAE2.950e-11985.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4Q3_9STRA9.990e-4845.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0QY41_9CRYP3.000e-3042.37Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
K0RXZ5_THAOC5.940e-2638.03Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2MYB7_9EUKA9.880e-1329.50Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..298
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.805

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:563555..570983 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.760.1mRNA_C-linearis_contig101.760.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 562983..571046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.760.1 ID=prot_C-linearis_contig101.760.1|Name=mRNA_C-linearis_contig101.760.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=299bp
MLPHTTLIILALCHPAIAFSPSSWSARSARPDEDKDSHQPSRLQRRRRLP
VCVAQSEAQVDTMDRARFLRRTAATSVAALAGGLAAPSGLQPSLAAEAMA
TEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQV
VTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVES
AVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRG
DGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRLEGLVVDGVRLGAA*
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