mRNA_C-linearis_contig101.760.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig101.760.1
Unique Name	mRNA_C-linearis_contig101.760.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: D7G9G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G4_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 2.780e-119
Identity = 180/207 (86.96%), Postives = 187/207 (90.34%), Query Frame = 1

Query:  334 QPSLAAEAMATEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRLEGLVVDGVRLGA 954
            QPS AAE  ATEFVDF DSRGLF CRIPKNFLRAER KDKRGTVFVAGDYSKAEV+SVQVV  FDLL DAGLPTIGDLTKWENVGKP  +ADLLKQRRDSDAAGG  VES VLPG T+DG VLQF LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALN DW+QEGGAK+RLKVA DSFRLEGL+VDGVRLGA
Sbjct:   32 QPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGA 238

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A6H5KHB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB6_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 8.360e-117
Identity = 200/311 (64.31%), Postives = 221/311 (71.06%), Query Frame = 1

Query:   40 CLRKGPLNMLPHTTLIILALCHPAIAFSPSSW------SARSARPDEDKDSHQPSRLQRRRRLPVCVAQSEAQVDTMDRARFLRRTAATSVAALAGGLAAPSGLQPSLAAEAMATEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRLEGLVVDGVRLGA 954
            C R+          +++LALC   IAF+P ++      +   A P   K  H       +++ P  +A      D   RA FLR  A                  PS AAE  ATEFVDF DSRGLF C IPKNFLRAER KDKRGTVFVAGDYSKAEV+SVQVV AFDLL DAGLPT+GDLTKWENVGKP  +ADLLKQRRDSDAAGG  VES VLPG T+DG VLQF LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALN DW+QEGGAK+RLKVA DSFRLEGL+V+GVRLGA
Sbjct:    6 CFRRVQPTKSSCKAVVVLALCCRVIAFAPFAFHPTRRNTPSIAPPSAFKWKHA------QQQQPRMLA------DMDSRAGFLRTAAXXXXXXXXXXX--XXXXXPSSAAEVAATEFVDFEDSRGLFSCLIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKAFDLLTDAGLPTVGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVEGVRLGA 302

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A835Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.680e-45
Identity = 107/236 (45.34%), Postives = 138/236 (58.47%), Query Frame = 1

Query:  235 AQVDTMDRARFLRRTAATSVAALAGGLAAPSGLQPSLAAEAMATEFVDFVDSRGLFGCRIPKNFLRAERPKDK--RGTVFVAGDYSKAEVMSVQVVTAFDLLKDAG-----LPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATV-DGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRL 918
            A    +DR RF   TA+    A+AG L  P   QP++A          + DSRG F   +P N++RAER  D+  +G +FV G+Y KA  +SV ++ +  LL+DAG     LPT  DLT W  VG P  +A LL  RRD DAA     +S VLP   V DG  L F +K+ + V R DLLEKE+GV ELYR TY KA+MRGDG+FL+ WAGALN +W +   A++ L     SF L
Sbjct:    4 AAASAIDRRRFAAGTAS----AIAGVLLLP---QPTVAE---VPSLAAYSDSRGYFEISLPANWVRAERKGDQEAKGVLFVTGNYVKAITLSVAIIKSSQLLRDAGTAPLVLPT-DDLTTWAGVGTPMGIAKLLAFRRDQDAAQAAAQDSEVLPDTVVLDGNALTFMIKTRVPVQRPDLLEKERGVRELYRLTYGKALMRGDGTFLLCWAGALNTEWGEPTNARDTLAAVVASFHL 228

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A7S0QY41_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QY41_9CRYP)

HSP 1 Score: 123 bits (309), Expect = 1.160e-28
Identity = 75/177 (42.37%), Postives = 99/177 (55.93%), Query Frame = 1

Query:  349 AEAMATEFVDFVDSRGL---FGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGAT-VDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNMDWEQ 867
            A+A   E+  F +  GL   F   IPK F +++RP    GT+FVAG    AE++SVQ+V+   LL D G+   GDL+ WE +G    +ADLL   RD DA     + S V P +  V G  L F   + I V R D L + QG+SEL R T  +A +R DG+ LVLWA AL  DW +
Sbjct:   63 ADAEVYEYSAFKEDGGLDAVFRADIPKEFFKSKRPLTN-GTIFVAGSLQTAEIVSVQIVSIPQLLADIGVLPTGDLSTWEAIGSAKAIADLLTSNRDGDAKQRGGLASKVDPASVAVSGRTLSFRTAATIAVQRPDKLLETQGISELRRITRARAEIRRDGTALVLWASALEQDWNK 238

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: K0RXZ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXZ5_THAOC)

HSP 1 Score: 113 bits (282), Expect = 1.460e-24
Identity = 81/213 (38.03%), Postives = 116/213 (54.46%), Query Frame = 1

Query:  346 AAEAMATEFVD-----FVDSRG--LFGCRIPKNFLRAER------PKDKRG------TVFVAGDYSKAEVMSVQVVTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATV----DGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRG-DGSFLVLWAGALNMDWEQEGGAKERLKVAADSF 912
            A++A+A E  D     FVD+    LF   +P+ F    R      P +K G      T+F AGD SKAEV++V+      LL++ G   +GDL+ +E +G PT +A LL +RR+ D  G + V  AVL   +V    DG  L+FT+K  I V + +LL +E GVS L+R T  KA +   DG+ LV++A AL+ D+    G    L+   DSF
Sbjct:   60 ASKALAEEATDVPMKLFVDTANPSLFAINVPQRFFAIRRSAKGDLPDEKTGKGRRGGTIFSAGDMSKAEVVAVERFPVKVLLEEEGYSPLGDLSTFEAIGDPTAIATLLLRRREKDRPGNVSV--AVLDKDSVVVTEDGKTLKFTMKQEISVQKPELLMEEMGVSRLFRTTVAKATLSSNDGNLLVVFASALDQDFSGPDGVA--LRKTVDSF 268

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BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Match: A0A7S2MYB7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MYB7_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 4.230e-12
Identity = 59/200 (29.50%), Postives = 98/200 (49.00%), Query Frame = 1

Query:  382 VDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQVVTAFDLLKD-------AGLPTIGDLTK------WENVGKPTVVADLLKQRRDSDAAGGLQVESAVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMR----GDGS----FLVLWAGALNMDWEQEGGAKERLKVAADSFRL 918
            +D+   F   IP +F+ ++R K   GT+FVAG++ +A V+SV       LL+D        GLP    + +      + ++G    VA LL + RD DA+ G    +  L   + DG+ L+F   + + V   D LE+++GV +L R T   +++     GDG+       +W  AL  DW+++   K  L+    SF +
Sbjct:   45 LDAASRFALDIPDDFVVSKR-KAVTGTLFVAGNFPRASVISVTAWPLDALLQDDARSRALPGLPQELVIAEHATPLSFTDIGSAKSVAQLLLRARDRDASSGALQSALTLSQLSSDGSRLEFECATELPVSDPDALEEQRGVRQLIRRTRAASVLGSVPGGDGAPVPALFSVWGSALEQDWDKD--LKAPLEKTVSSFSV 241

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot

BLAST of mRNA_C-linearis_contig101.760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7G9G4_ECTSI	2.780e-119	86.96	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KHB6_9PHAE	8.360e-117	64.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z4Q3_9STRA	1.680e-45	45.34	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S0QY41_9CRYP	1.160e-28	42.37	Hypothetical protein (Fragment) n=1 Tax=Cryptomona...	[more]
K0RXZ5_THAOC	1.460e-24	38.03	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S2MYB7_9EUKA	4.230e-12	29.50	Hypothetical protein n=1 Tax=Haptolina brevifila T...	[more]

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig101.760.1	prot_C-linearis_contig101.760.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig101 563555..570983 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927366.5334375-UTR-C-linearis_contig101:562982..563554	1622927366.5334375-UTR-C-linearis_contig101:562982..563554	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig101 562983..563554 -
1690879656.3738065-UTR-C-linearis_contig101:562982..563554	1690879656.3738065-UTR-C-linearis_contig101:562982..563554	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig101 562983..563554 -
1622927366.6083536-UTR-C-linearis_contig101:570983..571046	1622927366.6083536-UTR-C-linearis_contig101:570983..571046	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig101 570984..571046 -
1690879656.447403-UTR-C-linearis_contig101:570983..571046	1690879656.447403-UTR-C-linearis_contig101:570983..571046	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig101 570984..571046 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927366.5439115-CDS-C-linearis_contig101:563554..563673	1622927366.5439115-CDS-C-linearis_contig101:563554..563673	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 563555..563673 -
1690879656.3862684-CDS-C-linearis_contig101:563554..563673	1690879656.3862684-CDS-C-linearis_contig101:563554..563673	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 563555..563673 -
1622927366.5546637-CDS-C-linearis_contig101:563857..563993	1622927366.5546637-CDS-C-linearis_contig101:563857..563993	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 563858..563993 -
1690879656.3975837-CDS-C-linearis_contig101:563857..563993	1690879656.3975837-CDS-C-linearis_contig101:563857..563993	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 563858..563993 -
1622927366.564086-CDS-C-linearis_contig101:564393..564554	1622927366.564086-CDS-C-linearis_contig101:564393..564554	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 564394..564554 -
1690879656.4069905-CDS-C-linearis_contig101:564393..564554	1690879656.4069905-CDS-C-linearis_contig101:564393..564554	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 564394..564554 -
1622927366.5733712-CDS-C-linearis_contig101:564846..565029	1622927366.5733712-CDS-C-linearis_contig101:564846..565029	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 564847..565029 -
1690879656.4170465-CDS-C-linearis_contig101:564846..565029	1690879656.4170465-CDS-C-linearis_contig101:564846..565029	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 564847..565029 -
1622927366.587274-CDS-C-linearis_contig101:565383..565556	1622927366.587274-CDS-C-linearis_contig101:565383..565556	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 565384..565556 -
1690879656.4278405-CDS-C-linearis_contig101:565383..565556	1690879656.4278405-CDS-C-linearis_contig101:565383..565556	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 565384..565556 -
1622927366.597686-CDS-C-linearis_contig101:570858..570983	1622927366.597686-CDS-C-linearis_contig101:570858..570983	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 570859..570983 -
1690879656.4374642-CDS-C-linearis_contig101:570858..570983	1690879656.4374642-CDS-C-linearis_contig101:570858..570983	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig101 570859..570983 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig101:562983..571046-
coding sequence from alignment at C-linearis_contig101:562983..571046-

protein sequence of mRNA_C-linearis_contig101.760.1

>prot_C-linearis_contig101.760.1 ID=prot_C-linearis_contig101.760.1|Name=mRNA_C-linearis_contig101.760.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=299bp
MLPHTTLIILALCHPAIAFSPSSWSARSARPDEDKDSHQPSRLQRRRRLP
VCVAQSEAQVDTMDRARFLRRTAATSVAALAGGLAAPSGLQPSLAAEAMA
TEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVMSVQV
VTAFDLLKDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGLQVES
AVLPGATVDGAVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRG
DGSFLVLWAGALNMDWEQEGGAKERLKVAADSFRLEGLVVDGVRLGAA*

mRNA from alignment at C-linearis_contig101:562983..571046-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig101.760.1 ID=mRNA_C-linearis_contig101.760.1|Name=mRNA_C-linearis_contig101.760.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8064bp|location=Sequence derived from alignment at C-linearis_contig101:562983..571046- (Chordaria linearis ClinC8C monoicous)
TGCTTCGTTGCCCCCTGGGCGTGGGCGAGAGAGAGGCATTGCTTGAGAAA
AGGTCCCCTCAACATGCTACCACACACAACCCTTATCATTCTTGCGCTGT
GTCATCCGGCGATCGCTTTTTCTCCATCATCATGGTCTGCCCGGAGTGCA
AGGCCGGATGAAGATAAAGATAGTCATCAACCGAGCAGGTAGACACCGTC
GGCTACGCAACGGGCGTAGCTGCTCATTGCTCGTGTAGAACCCTCTACGC
TTCACCATCATTTACCTTCTAGGCAGTGGTCGATCTCTCGCACTTGGGAG
GTGTCCTCGCCCCATTCTCTCAGACCTCAACAACAGCAGTACAAGTCGCA
AAGATGTGGTTGTGGAACATACCAGGTAGTTGAACGATTACGATTCTGAA
GTCGATAAGGACCGAAATTCACTTGTAACTTACGTATCATTCATGGTAGT
ACCTTCGCCTGGCGACATATTTGGTGCTCATGAGCAGTGGGTTCGCGTTT
CTGCACGCTGGGCACTCTCAAAGCTGCACAGCTGGGTTGAGGTTGATTCT
TACGTAGCAAATGGTTCGTACGCGTGAGTGTTGCAGCCAAATCGATCCGT
GTGGTATTTCTTTTTACTTTCCCTACGGATATGCCGGTCGCCCCGGTGGC
CTAGTGGTTTAACCTCGAACCCACTAGCAGCAAAGTCTGGAGTTCAATTC
CAAGCAAAGGTGTTTATTTTGCGAGTTTGCAGGTGAAAGCGATAACATAG
CTGAAAAAGCTCGTGAGTACCAAACTTCGACTTAGGACTTAGGACGTTGA
CGAGGGAAAGGGATGGCTGCACCCTTCTCGCGATAAATTTCAAGGCAAGC
ACTGCAGGAGGAAGGTGGGGCAAAAAAGAAACAGAAAAAGAAGAAAAAAG
CCCCAGCGTTTACCCCCTCCTGTGTGACCCCGGTTGGTTCTAGTTGTACA
GAAAAATACACTGAACAAGTGTAGTACTCTAAATACACCGCAACGTGTAG
TACGCGTCTCGCCTTGATCGGAAAGGGACTGTCGCCAAAATAAATGGGAC
GAAAACACAAACACACACGGATACCCCGGCATTCACCAATACCTGGTATA
CTGACGAATCCGTAAATTAGTAATGTAATTAGAGGATAGATGGAGAAGAC
GAAGGGACCATGGGCCCGCACGGGCGGAATGAGCTGAACGACAACGGTCG
GCTGCTGCTGACCTTCGCCGCGTACAACAGGCTGGCAATCCTGAACACCT
TCTTCGACGGAGGGAAGGACGGGATATGGCATACATACAACGGTGTGTCA
GGGACCGACCGCAAGTGCCTAGACTACATCCTCACGCGCCAGTCACACCG
CCGCCGGGTATCCAACGTGGTCGCCATCCCCCAGCCGGTGCGTCCAGTCA
AGCCGGACTCAGACCACAACATGGTGGTGGCCACCGTCAACCTCAGTGGC
CGGCTCGCCCACAACCGAGCTGTCCGGACCAACGCCAAACCGCGGCAGTT
CAATCGACGGGAATTGCAGGTAGAAACCGCACGGTGGGCGGTGACACAGA
GGTTCCTCCGCAACCTCCGCCAGCGAGAGGAACCAGCGAAGACCGCCCCG
GAGATGGCGAGGGCGTTTACAGATGCCCTCATCGATGCGGCGCGGAAGGA
ACTGCCTGAGGAGCCTCGGAGACGGCACGAGCAGGAGTGGAACGAGACCC
CCGAGGCGAGAGCAGCTTTGGATGCCGCCCTTTGCAAGCGGCGGGCGGCA
CGCCGCGCCTTCAAGTGTAGCGTGAATGCAGCAACATGGAGGATCCTCAA
GGTAGCGTGCAAGGGGGTGGCGGCGGTAATCGCAACGAGCATCTAGGCCC
ACCTGGACAGATATGTGACGGAGCTCGAAACGGTCTACAAGGACCGCGAC
ATGCGGGGGCTGTACAAACACCTCAAGAGCTCGGTGGGCCTCGGCGGGAG
ACAAGCAGAAGGACAGCAGCTTGTCAAGGACGAGAATGGCGTGCTGCTCC
GGGGCAAGGAAGACATCCTCAAACGGTGGGAGAGATTCTTCGGCACCCTC
CTCAGCACCAAGTCCCCCACCCTGAACCCGGGCGTCGTCGAGCAAGTGAC
ACCTCGACCAACGACGCGAGCCACTCGACGGCTGGGAACAGCGCCGGACC
TCGAGGAGGTGGAGAGGGCGACGCAATGTCTGCAGAACTGGAAGGCGCCC
GGCGATGACGCCCCCTCCATGCCGAGTTGCTTAAGATCGACGGCAACGAA
CCCATTGTCCTGGAGCACCTACATGCCATCTTCGCCGAAGTGTGGAACGG
GGGAGAGATGCCGCAGGAGTGGAAGGATGCAATCATCAAGGTGCTGTACA
AGAAGGGGGAGCGGGCCAACTGCAACAATTTCAGGGGCATCTCGTTGCTG
TCGCACGTAGGCAAGGTCCTCGCCAAGACTATCACCAACCGCCTGAGTGC
ATACTGCGAAGCCAACGACATCCTTCCGGAGGAGCAGTGCGGGTTCCGAC
CTGGTCGATCCACGGTATGCATGCTGTCCGTGGTGCGCCGACTCCAGGAG
TTAGGGCGGAGGAGGAAGATACCGCTCTACATGTGCTTCGTCGACCTGCA
GAAGGCCTACGACTCGGTGGACCGAGAGCTGCTGTGGAAGGTGCTGGCCC
GGGCCGGGATTCCCGCGGAGATGATCGCCGTCATCCGCCAATTCCATGTC
GGGATGCGGGCCCGGGTGCGCATGGACGACGGAGAGCTATCGGACTGGTT
TTCGGTCACGCAGGGCCTGCGCCAAGGGTGTACAATGTCCCCACTGCTTT
CCAACGTGTTCTTCGCCGCGCCCATCGAGATCATTGCCGTGCGATTCAGC
GAGGATGAGGTAATTATGCAGAACCTGGTGCACTTCAAGGAGGAGCCGGG
AGCGGGGGTGGGGACACCGCTGGACCAAGTGCGGCGGGCGGTATGGGCGA
TGCTGTACGCCGACGACGCCGGCGTGGTGTCGAAATCCGCCGACGGACTG
GCGAGGATGATGACCGTTATCGTGGAGGTATTCCGGGAGTTCGGGCTGAC
GGTATCGGAGAAGAAGACGGAGACCCTCCTGATGCGCGTGAAGGAGAAGC
AGCCACCACCGCCGCCGCCGCCGCCGCCGCTGATCATCGAAGCAGCGGGG
CAGAGGTACGCGCAGACGACCGAGTTCCGGTACTTGGGTGGCTTCGTCAA
CGAACACGGCGACCTCACCCGAGAGATCAACTACAGGAGCAAAATAGCCT
GGGCGTGCTTCAGGAGATATGCCCGGGAGCTCTTCGACAGGCAGGGAGCA
CCGTTCCGGCTCAAGACTCGCCTACTCAAGGCGGAGGCAATGGAGGCGCT
ACTGTACGGTGGCATGTCGTGGTCACCGCGTCGCGAGCACTACCGGGTGC
TGCAGACGACACACCACCGGCTGCTCCTGCGAGTCATCGGATACCGACGC
AAGCGGGGTACCCACCGGCAGCTGTCATACGCCCAGGCGCTGAAGCAGGT
CGGCTGCCAGAGCGTGGAAGCCACTGTCCGTCAGCGGCGGCTGCTCTTCG
CGGGGGCCGTAGCAAGGCAGCCGGACGGGCGACTCCCGAAGCGACTGATG
TTCGGCAAGGTGGTGGGAGGGGAGGACCCACCCGGGCAGGGGAAGCCCGG
AGCAGAGTTGGCTGATATGCCTGAAGGACGATTTGAAGGTGTTCGGGGCC
ACGCACGGCTCCACGGCCGACGAACCGTGTGTCTTCGGAGTCCCTAAATT
AATTTGGGCGGAGGCGGCGAAGGTGAAGGGGGGAGTACCGTGGCACTCGG
GGGTGCTGCAGGGAGCTGAGGGGTTTATGACCTCTTGGCACAAGGACGAG
GAGGAGGCGAGCCGACAACGCACCACTAAGCGAGGAGACGACGGGCCCAG
AAATAGTTTAGACACGGCGCCAACCAACGGGACGGGAGGGGGGCGGAAAG
AAACGGCGAGGGAAGAAAGCAAGCGAGAAGAGACCGACCGGGTGGCGCGA
TATGTGACGGATTGAATCTAGTGACTATTTTTTCCTTTTACTTTCCCCTC
TCCCCCCCTTTTTTCGCTGCACCATTACACTACCCCCCGGGGAATGATGT
CGTGTTTAGATTATTTCTTTCCGGGTGTGACTGTCCCTCTGCGTGTTGGA
TGTTTTATTTTCGTCGACATGTCTCCTTGTTTGCTTCCCTTGTAACATAC
TTCATATATATATATGCACCTTAGTCGGTGGAGAGGGATCCGACTATGTA
TTTTCCTTGCCGGGGGAACTGGGACGGAACACCCTGGCTTCGTAGGGGTA
GCCAGATAGAATCGGGAGGTTGTACCCCTGGTTGGCGATGTTGGCGCTCC
ACTCTTATTTTTATTTATTTTTTGCCTCACATAGCGTGTAGAGGGGAGCG
GAGGGCTCCAGACTATTTGTTTCCTGGTTCTTTTATTTTTCTCGTATTTT
ATCGCTCTGCTGACCCTTGGGCTCCGTTTTATTTGTCAGTATACCTTTTT
AGGTAAGTTAGCTTGTGACCACGGAAATTGGCCGCGTCAAGTGATTGATT
AGTACGGAGAGGTTGAGACAGAAGGAGGTACTGGATAGAGACGGGACCGG
GATGGTTTTTAATGTGAAGACAACAACAACAACAACAACAACAACAACAA
CAACAATTAGATTGACTCTTCAGAGTAACGTCAGATGACCATCCAGAACC
TATATCATGGCCGGGGTATTACAGAGAGAGACAGAACCGTTCCCGGGATT
CCTCGGAGGAACAGAGCGTTCCTCGGACGAATGCGGGGTATCTACCCGTG
TGCAATTGCACCCCTGGCTGTCTCGCCCTCACACGCACAACCCGGTGTAT
GTCTACACCACAAAGCCAAGGAGAGAGACCTTCAGCCTGTTGAACCTATC
CAGGGCTCGTCCCCATTATAGTGGCGTCGACGGCAAGTTCATCCCCCTTA
ATAGTAAATGCAGATGATATTACAGCAGTACTTCGTATGTCGTTGTCTAC
CTGGTGTGCTGTGTCGATTCTGGGGTGGCATTTCGTATTTACCGCTTCTC
CGCTGTTCACCGCCTTTCGCGATCGATTTACTTTCCTGCTGCTGCGCGTA
GGTAAGACACCTGACGATAGCAACAACCTGGCGAATTTCCTGTGATACAG
AAGCAGGCACACGTGCACACGTAACTCCACAACACGCCCCATTTTAACCA
AAACTTAGCATACAGCAGTCTAGGCTACTACAAACACACGTTTGGTTCAG
TTGGCTCTTGCGGGAGTCGCCAATATTTTTGCGGGTTAAATAGCCAGCGG
GAAATGGTCATGGTGGGAGACGAAGCAAATCTCGGTCACGCCGGAGCTGC
CGCTTGCTCAAGCCACGGATCAGATTTGGAGATGTCGATTTATCTAACAA
TGCACTTTGTTTTGCTCTGCAATTTTGTATGTCGGGATTGACGTGTGGTA
GGCTCCAATTTGACCGCGTTTCTGTTTCGCTGTGTTTTAGGCTGCAGCGA
AGGCGCAGACTCCCTGTGTGTGTCGCACAGAGCGAGGCGCAGGTTGACAC
AATGGACAGAGCCAGGTTTCTGCGGCGAACAGCGGCGACATCTGTAGCAG
CATTGGCAGGAGGGCTAGCGGCACCTTCCGGGTTGCAACCTTCTCTAGCA
GCGGAAGCCATGGGTGCGTCGTTCCGATGAGAACTCTGTCCTGTTCACTC
TCTGCCGCGGCCACTCCTCTATGGGACCTCGGATAAACTTGAGCTATGAG
AGCACAATAAGATAGAGACTGGTGTGCGAGCAAGTATATTTGAAGCCGGA
AGGCCATGTTGCTCGTGAGTCGAAGAAACGGAAAGCATGTTCATGAAACC
AATCACCGGCAAGATGGACAGCAAGCTGGCATCTTCCTGTACCTGCCGCA
CGGTTATCTATCTGTCACTTGTTTTTTTTCGTCGGCAGAGTAGGTTGCGT
CGTCTCATTATCTATTTACGTGTTCCGCTGATATTGCCTGTCTCTTTGCT
GGCTCCTTTCGTTGCAGCAACCGAGTTTGTGGACTTTGTGGATTCGCGTG
GACTCTTCGGTTGTCGCATCCCTAAGAACTTTCTTCGAGCGGAGCGCCCC
AAGGATAAGCGAGGGACGGTGTTCGTTGCGGGCGATTACAGTAAAGCAGA
AGTTATGTCGGTTCAGGTGGTGACCGCCTTCGACCTGTTGAAAGACGCAG
GTGAATAGGGGGCCGTACGTGTTGACCATCACGGAAATAGTGGTAGCAGT
GCAGACTACACGTCGAAAGCAGAACGGCGGGCATTCGCCGCGTATGTCGT
GGCCTTCCTCACACTCGGTAAATACCAGCACTGAATGCCAGCACTTCGAC
CCACAGCTACGTGCCATGTCCCGGTGTGCCTGCCATAGTCATGTTACGAC
CTGTCGCCACGCCCTGTTGTGCTTGTTTTCCTTGGCGGCGGTTCGTAGCT
TCAGGTCAACGTGTCGTGTTCGTTGTACGTCGTCGTCGGCAGGTTTGCCG
ACGATTGGAGATCTTACGAAGTGGGAGAACGTAGGCAAACCCACCGTGGT
CGCGGATCTACTCAAGCAGCGACGAGACTCAGACGCTGCGGGGGGGTTGC
AAGTGGAGAGTGCCGTGCTCCCAGGAGCAACAGTCGACGGCGCTGTTCTG
CAGGTGACCAGCAGACTGGAAACCAGCGGAACTGTCTCAAAACTACGTAC
CACCGAGCTGCATGGACACCCTAAGCAATCGGCACAGAGTACTCGGTTTC
TGCTCTGCGTAACCTGAACACATTTCGTATGCTCTCGAAAGTAAGCAAGC
GCAGTCTGCGAGTCCGCCTTCCATGGTTATCTCAGGTGTTTCGCCGGAAG
TACGGTCGCATGTTGCGACTTGCTTACCTTGCTGTTCACAGCAAACGACA
CCGTGTTGTGCTTTGCCGATAGATTGCCCAGAAGCATTTGCGACGTAAGT
GCGCAGCGCACGTGCTTTCTAAGACTCCGTGCAGTCGAGTTTCGCTCTCG
CGATCGGAATCAATGTCACCCACCCGCGATTCCTCTCCATGATTTATACG
CAGTTTACGCTCAAGTCCCCGATCAAAGTGATGCGGACGGACCTATTGGA
GAAGGAGCAGGGTGTGAGCGAGCTCTACCGAAATACCTACGTCAAGGCGA
TCATGCGTGGCGACGGTAGCTTCCTCGTCCTGTGGGCAGGTGCGTTTGCT
TGCACAGCTGCTTTCGACTTTGCAGCACTTGTACTGGCGTCCCGACGTGA
TTTACTTTTTATGCGTGCCGTCCATCGTTGACGACAATGTGATCCTTGCT
TATCCTACGATTACCCTTTCGCCCTTTGACCACGTGCTTCATGGATGGCG
TGGCAATTGCCCCTCTTCTAAAGGCGCGTTGAACATGGATTGGGAACAGG
AAGGAGGGGCGAAGGAGCGCTTGAAGGTGGCCGCTGATTCTTTCCGCCTG
GAAGGGCTAGTCGTAGATGGCGTGCGGCTCGGTGCTGCCTAAAAAGTGTC
TCCGCGAAACTGTGCCCACTCTCTCCGTCCACCTCTGAGTAAAGACTGTA
GCCTTTGCGTTGGCAAAAGAGAAATCGCTGGACAGAAAATAACTTGGGAG
AGACTGACACGCTGAGACGGCAACCCCCGCTCCTCTTTCCCCTACCAACC
TGGGGCTCGGTCGTGTTTGTAGCCGGCCTAGTTTCCCTTCTCCCTTTGCG
TGCTCAGCGAAAACGCGACCTCAACACCCAAGTGTGACACATTGCTTGAA
GATGTTTTACCAAAGAACCTTATAGCTGTTCGACGAGAAGGGTTTGTACT
CTGCAATAGTTCCGGAGATTTCACCCTACCCGCCCCGCAGGTTCATAATA
AAGCAACGCTGAACTTGCTACGTACCACAGGTCTCAAGCTCTATATTTTT
GCTCATGCGCGGATTGTTTTCGGCAGCATGGTCGGAAGCCTGAAGTGACC
CGATGTGGGGGACGGGTACTGCTGTATTGGACTGGAAAATAGAAAATAGA
TGTTCACGGGCCGGCGGACCTTCCGTGGCCGCTCCATGATGCAACAGCTC
GCCGTCACAAGTTC

Coding sequence (CDS) from alignment at C-linearis_contig101:562983..571046-

>mRNA_C-linearis_contig101.760.1 ID=mRNA_C-linearis_contig101.760.1|Name=mRNA_C-linearis_contig101.760.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at C-linearis_contig101:562983..571046- (Chordaria linearis ClinC8C monoicous)
ATGCTACCACACACAACCCTTATCATTCTTGCGCTGTGTCATCCGGCGAT
CGCTTTTTCTCCATCATCATGGTCTGCCCGGAGTGCAAGGCCGGATGAAG
ATAAAGATAGTCATCAACCGAGCAGATGCTACCACACACAACCCTTATCA
TTCTTGCGCTGTGTCATCCGGCGATCGCTTTTTCTCCATCATCATGGTCT
GCCCGGAGTGCAAGGCCGGATGAAGATAAAGATAGTCATCAACCGAGCAG
GCTGCAGCGAAGGCGCAGACTCCCTGTGTGTGTCGCACAGAGCGAGGCGC
AGGTTGACACAATGGACAGAGCCAGGTTTCTGCGGCGAACAGCGGCGACA
TCTGTAGCAGCATTGGCAGGAGGGCTAGCGGCACCTTCCGGGTTGCAACC
TTCTCTAGCAGCGGAAGCCATGGGCTGCAGCGAAGGCGCAGACTCCCTGT
GTGTGTCGCACAGAGCGAGGCGCAGGTTGACACAATGGACAGAGCCAGGT
TTCTGCGGCGAACAGCGGCGACATCTGTAGCAGCATTGGCAGGAGGGCTA
GCGGCACCTTCCGGGTTGCAACCTTCTCTAGCAGCGGAAGCCATGGCAAC
CGAGTTTGTGGACTTTGTGGATTCGCGTGGACTCTTCGGTTGTCGCATCC
CTAAGAACTTTCTTCGAGCGGAGCGCCCCAAGGATAAGCGAGGGACGGTG
TTCGTTGCGGGCGATTACAGTAAAGCAGAAGTTATGTCGGTTCAGGTGGT
GACCGCCTTCGACCTGTTGAAAGACGCAGCAACCGAGTTTGTGGACTTTG
TGGATTCGCGTGGACTCTTCGGTTGTCGCATCCCTAAGAACTTTCTTCGA
GCGGAGCGCCCCAAGGATAAGCGAGGGACGGTGTTCGTTGCGGGCGATTA
CAGTAAAGCAGAAGTTATGTCGGTTCAGGTGGTGACCGCCTTCGACCTGT
TGAAAGACGCAGGTTTGCCGACGATTGGAGATCTTACGAAGTGGGAGAAC
GTAGGCAAACCCACCGTGGTCGCGGATCTACTCAAGCAGCGACGAGACTC
AGACGCTGCGGGGGGGTTGCAAGTGGAGAGTGCCGTGCTCCCAGGAGCAA
CAGTCGACGGCGCTGTTCTGCAGGTTTGCCGACGATTGGAGATCTTACGA
AGTGGGAGAACGTAGGCAAACCCACCGTGGTCGCGGATCTACTCAAGCAG
CGACGAGACTCAGACGCTGCGGGGGGGTTGCAAGTGGAGAGTGCCGTGCT
CCCAGGAGCAACAGTCGACGGCGCTGTTCTGCAGTTTACGCTCAAGTCCC
CGATCAAAGTGATGCGGACGGACCTATTGGAGAAGGAGCAGGGTGTGAGC
GAGCTCTACCGAAATACCTACGTCAAGGCGATCATGCGTGGCGACGGTAG
CTTCCTCGTCCTGTGGGCAGTTTACGCTCAAGTCCCCGATCAAAGTGATG
CGGACGGACCTATTGGAGAAGGAGCAGGGTGTGAGCGAGCTCTACCGAAA
TACCTACGTCAAGGCGATCATGCGTGGCGACGGTAGCTTCCTCGTCCTGT
GGGCAGGCGCGTTGAACATGGATTGGGAACAGGAAGGAGGGGCGAAGGAG
CGCTTGAAGGTGGCCGCTGATTCTTTCCGCCTGGAAGGGCTAGTCGTAGA
TGGCGTGCGGCTCGGTGCTGCCTAAGCGCGTTGAACATGGATTGGGAACA
GGAAGGAGGGGCGAAGGAGCGCTTGAAGGTGGCCGCTGATTCTTTCCGCC
TGGAAGGGCTAGTCGTAGATGGCGTGCGGCTCGGTGCTGCCTAA