prot_C-linearis_contig101.754.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.754.1
Unique Nameprot_C-linearis_contig101.754.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length64
Homology
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: A0A6H5KJW1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW1_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 8.150e-25
Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    2 VSIQDNTFNTNQYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQ 63
            + IQDNTFNTN+YKY LALIVVVDKEN+TQIAMQALL+NERTEDF FLFR FREL  G QP+
Sbjct:  135 IIIQDNTFNTNEYKYHLALIVVVDKENYTQIAMQALLANERTEDFKFLFRVFRELCEGVQPE 196          
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: A0A6H5JYV9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV9_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 6.910e-24
Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 0
Query:    2 VSIQDNTFNTNQYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQV 64
            + IQDNTFNTN+YKY LALIVVVD EN+TQIAMQALL+NERTEDF FLFR FREL  G QP+V
Sbjct:  135 IIIQDNTFNTNEYKYHLALIVVVDNENYTQIAMQALLANERTEDFKFLFRVFRELCEGVQPEV 197          
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: A0A6H5KQ14_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ14_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.530e-23
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0
Query:    2 VSIQDNTFNTNQYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQV 64
            V +QDNTFNTN YK+FLALIVVVD EN+TQIAMQALLSNER+EDF+FL  TF+EL GG  PQV
Sbjct:   31 VILQDNTFNTNVYKFFLALIVVVDMENYTQIAMQALLSNERSEDFIFLMETFKELCGGLMPQV 93          
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: A0A6H5KGZ7_9PHAE (MULE domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ7_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.610e-23
Identity = 50/60 (83.33%), Postives = 53/60 (88.33%), Query Frame = 0
Query:    4 IQDNTFNTNQYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQ 63
            IQDNTFNTNQYKY LAL V VDKEN+T IAMQALL+NERTEDF FLFR FRELI GAQP+
Sbjct:   39 IQDNTFNTNQYKYHLALKVAVDKENYTHIAMQALLANERTEDFEFLFREFRELIEGAQPE 98          
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: A0A6H5K030_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K030_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.850e-22
Identity = 50/65 (76.92%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    2 VSIQDNTFNTNQ--YKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQV 64
            + IQDNTFNTN+  YKY LALIVVVDKEN+TQIAMQALL+NERTED+ FLFR FREL  G QP+V
Sbjct:   64 IIIQDNTFNTNERVYKYHLALIVVVDKENYTQIAMQALLANERTEDYKFLFRVFRELCQGMQPEV 128          
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: A0A6H5KFX3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX3_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.550e-21
Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    2 VSIQDNTFNTNQYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQ 63
            + IQDNTFNTN+YKY LALIVVVD EN+TQIAMQALL+NERTEDF FLFR F  L  G QP+
Sbjct:   39 IIIQDNTFNTNEYKYHLALIVVVDNENYTQIAMQALLANERTEDFKFLFRVFGGLCEGLQPE 100          
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 3.500e-21
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0
Query:    2 VSIQDNTFNTNQYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQV 64
            + IQDNTFNTN YK+FLALIVVVDKEN TQIAMQALL+NER+E F F+F +F+EL GG  P V
Sbjct:  344 IIIQDNTFNTNVYKFFLALIVVVDKENHTQIAMQALLANERSESFEFIFESFKELCGGGSPGV 406          
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: A0A6H5JG50_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG50_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.970e-19
Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 0
Query:   11 TNQYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQV 64
            + +YKY+LALIVVVDKEN+TQIAMQALLSNERTEDF FLFR FREL  GAQP+V
Sbjct:  180 STRYKYWLALIVVVDKENYTQIAMQALLSNERTEDFRFLFRVFRELCEGAQPEV 233          
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: D7G8C7_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C7_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 4.500e-18
Identity = 42/63 (66.67%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    2 VSIQDNTFNTNQYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQV 64
            V +QDNTFNTN YK+ LALIVVVDKEN +QIAMQALLS+ER+E F F+F +F++L  G  P+V
Sbjct:   68 VIVQDNTFNTNIYKFHLALIVVVDKENHSQIAMQALLSDERSESFEFVFESFKQLCEGGTPEV 130          
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Match: A0A6H5K2Y1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y1_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.570e-17
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = 0
Query:   13 QYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLFRTFRELIGGAQPQV 64
            +YKY LALIVVVDKEN+T I  QALL++ERTEDF FLFR FRE+IGGAQPQV
Sbjct:  224 RYKYHLALIVVVDKENYTHIVFQALLASERTEDFDFLFRAFREMIGGAQPQV 275          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5KJW1_9PHAE8.150e-2580.65MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JYV9_9PHAE6.910e-2479.37SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KQ14_9PHAE1.530e-2377.78SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KGZ7_9PHAE2.610e-2383.33MULE domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5K030_9PHAE2.850e-2276.92MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KFX3_9PHAE2.550e-2175.81SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JXK5_9PHAE3.500e-2173.02SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JG50_9PHAE1.970e-1981.48MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G8C7_ECTSI4.500e-1866.67Putative far-red impaired response protein n=1 Tax... [more]
A0A6H5K2Y1_9PHAE1.570e-1778.85SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 6..63
e-value: 8.6E-12
score: 45.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:502627..502986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.754.1mRNA_C-linearis_contig101.754.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 502627..503101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.754.1 ID=prot_C-linearis_contig101.754.1|Name=mRNA_C-linearis_contig101.754.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=64bp
MVSIQDNTFNTNQYKYFLALIVVVDKENFTQIAMQALLSNERTEDFVFLF
RTFRELIGGAQPQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom