prot_C-linearis_contig101.732.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.732.1
Unique Nameprot_C-linearis_contig101.732.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length121
Homology
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match: D8LE10_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE10_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 6.110e-51
Identity = 90/108 (83.33%), Postives = 101/108 (93.52%), Query Frame = 0
Query:    1 MRSSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSKKPKAAASAADKG 108
            MR S+FL+SAALLIGSA+DVLGGA PVSVKVTLRGKKYDV+DATSVEDV+KSVEEQAGLAKEQQSVLFKGSLLK EL+LEEAG++DGDTVNIVPSKKPK + +A + G
Sbjct:    1 MRPSSFLISAALLIGSAVDVLGGAGPVSVKVTLRGKKYDVQDATSVEDVQKSVEEQAGLAKEQQSVLFKGSLLKPELELEEAGVSDGDTVNIVPSKKPKTSVAAVEAG 108          
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match: A0A836CH29_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH29_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 9.310e-22
Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 0
Query:    1 MRSSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSKKPKAAASAA 105
            MR S  LLSA  ++ + +  L  A P++V VTLRGKKY V   +SV D++  V+E+AGL+ EQQSVLFKG LL +  DL   G++DGDT+N+VPSKKPKA  +AA
Sbjct:    1 MRFS-LLLSAGAVLAAVVPSLASA-PLNVVVTLRGKKYQV-SGSSVSDIQAEVQEKAGLSAEQQSVLFKGKLLAAGDDLSTVGVSDGDTINVVPSKKPKAERTAA 102          
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match: W7T2R4_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2R4_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.680e-15
Identity = 53/124 (42.74%), Postives = 76/124 (61.29%), Query Frame = 0
Query:    3 SSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSK---------KPKAA---ASAADKGFAVGAG 114
            ++ FLL   LL     ++ G A PV+V VTLRGKKYD+  A SV+D++  +E ++GL   QQ++LFKG  L +   L  AG+ +GDT+NIVP+K         +P+A+   ASA D+  A  AG
Sbjct:    8 TATFLLVVTLLCCCLTNIFGTAAPVNVVVTLRGKKYDL-SAESVQDIQAQMEGKSGLKPGQQAILFKGKQLGASESLSAAGVVEGDTLNIVPTKGDVPRAPPPRPRASFSSASAEDEDLATPAG 130          
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match: A0A7S2N0G5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0G5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 8.480e-15
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 0
Query:    2 RSSNFLLSAALLI---GSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPS 95
            RS    LS+ALL+   G+   V+ G+ P +VKVTLRGK+Y + + ++V +++K VEEQAGL   +Q VLF G  LK    LE+ G+ DG  +NIVP+
Sbjct:    4 RSLISALSSALLVLLYGAIDTVVEGSKPFNVKVTLRGKRYTIPNVSTVRELQKGVEEQAGLTPAKQGVLFGGKKLKPSDVLEDMGVEDGSLINIVPT 100          
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match: A0A7S2WG81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WG81_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.460e-14
Identity = 38/75 (50.67%), Postives = 62/75 (82.67%), Query Frame = 0
Query:   27 VSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSKKPKAA 101
            ++V  TLRGKK+DV  A++V+++R+++E +AG+ +++QSVLFKG  L ++  LE+AG+++GDT+N+VP K PKAA
Sbjct:   29 LNVVCTLRGKKFDVA-ASNVQEIREALEAKAGIEQDRQSVLFKGKKLDADQILEDAGVSEGDTINVVPLKAPKAA 102          
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match: B7G5I5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5I5_PHATC)

HSP 1 Score: 67.8 bits (164), Expect = 4.420e-11
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 MRSSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVRKSVEEQAG-LAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSKK 97
            MR+   L  +A L+G  +       P +V+VTLRGKKYDV D  +V+D++  +EE +G LA +Q  VLF G  L+S   L + G+ADG  +NIVPS K
Sbjct:    1 MRTVFTLFLSATLLGRWLAAASAPVP-NVQVTLRGKKYDVTDVRTVQDLQDRIEEVSGILAPQQGRVLFDGKRLESTDVLADVGVADGAQLNIVPSSK 97          
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match: A0A7S2Y1L4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1L4_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.460e-10
Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 0
Query:   27 VSVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSV-LFKGSLLKSELDLEEAGIADGDTVNIVPSKKPKAAASAADKGFA 110
            + V VTL+G++Y V  AT+V D++  +E+QA L   Q  V LFKG +L  E DLE  G+  GD +N+VPS+KP+ AAS +  G A
Sbjct:   23 LDVFVTLKGQRYSV-TATAVGDIKDELEKQAALDPSQDFVVLFKGKVLSPEDDLEAEGVKSGDIINMVPSRKPRPAASPSSVGAA 106          
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match: A0A448YZF6_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZF6_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.230e-7
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   20 VLGGAN-----PVS-VKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELD--LEEAGIADGDTVNIVPSKK 97
            +LGGA+     PVS V VTL+GKKY + D T++ ++++ +EE +G+   +Q  +       SE D  L EAG+ +GD +N VP+KK
Sbjct:   18 LLGGASAAPPTPVSNVHVTLKGKKYQIDDVTTLAELQERLEEHSGIPPSKQGKILHNGKRLSESDDGLSEAGVQEGDQLNCVPAKK 103          
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Match: A0A7S1D1N7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1N7_CYCTE)

HSP 1 Score: 50.4 bits (119), Expect = 7.940e-5
Identity = 29/74 (39.19%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   22 GGANPV-SVKVTLRGKKYDVKDATSVEDVRKSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVP 94
            G  +PV +++VTLRGKK+DV +A + +DV   +++ AG+   +  +LF G  L  +  LEE G+ +GD++ +VP
Sbjct:    1 GVHSPVKNIQVTLRGKKFDVDEAVTAKDVLGKMQKSAGVGDGR--LLFDGKQLALDDSLEEVGVKEGDSLQMVP 72          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LE10_ECTSI6.110e-5183.33Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A836CH29_9STRA9.310e-2254.29Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
W7T2R4_9STRA2.680e-1542.74Ubiquitin-like domain-containing protein n=2 Tax=M... [more]
A0A7S2N0G5_9STRA8.480e-1546.39Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2WG81_9STRA2.460e-1450.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B7G5I5_PHATC4.420e-1144.90Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S2Y1L4_9STRA3.460e-1047.06Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A448YZF6_9STRA4.230e-740.70Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A7S1D1N7_CYCTE7.940e-539.19Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 27..95
e-value: 4.1E-6
score: 36.3
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 29..93
e-value: 2.7E-11
score: 43.1
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 29..93
score: 13.707
NoneNo IPR availableGENE3D3.10.20.90coord: 22..101
e-value: 1.0E-11
score: 46.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..121
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.677
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 29..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:207787..211038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.732.1mRNA_C-linearis_contig101.732.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 207735..211038 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.732.1 ID=prot_C-linearis_contig101.732.1|Name=mRNA_C-linearis_contig101.732.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=121bp
MRSSNFLLSAALLIGSAIDVLGGANPVSVKVTLRGKKYDVKDATSVEDVR
KSVEEQAGLAKEQQSVLFKGSLLKSELDLEEAGIADGDTVNIVPSKKPKA
AASAADKGFAVGAGGDTEEVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf