prot_C-linearis_contig101.731.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.731.1
Unique Nameprot_C-linearis_contig101.731.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length209
Homology
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: D8LE09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE09_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 1.570e-66
Identity = 121/194 (62.37%), Postives = 134/194 (69.07%), Query Frame = 0
Query:   18 SRCADCGAPCADWASVAHGSFVCLNCAGQHRSLGMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRIGLYPWSTIQDKCEHPCLPLYRKHLAALADGEEPPPISREVLENAVLAASGE-EASD--LDDDKHDATSSSSLDSDEGGESTRVQLKNLIRNVSGGCGGIGHVLRRWSCNETAARRARAGGRGK 208
            SRCADCGAPCADWASVAHGSFVCL CAGQ RSLGMHV FTRSL  DKWT+  LR+MEAGGN RLAEF RR+GLYPWST+++K  HPCLPLYRK LAALADGE+PPPISRE LE AVL ASGE EASD                            LK L ++V+GGC G+G   RR  C +   RR  AG  G+
Sbjct:  363 SRCADCGAPCADWASVAHGSFVCLKCAGQQRSLGMHVIFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRMGLYPWSTVEEKYRHPCLPLYRKRLAALADGEKPPPISREALEQAVLEASGEGEASDDGXXXXXXXXXXXXXXXXXXXXXXAHDPLKLLFKSVTGGCDGVGQAFRRHFCQQALFRRTGAGAGGE 556          
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: A0A4D9D8B9_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8B9_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.390e-24
Identity = 51/113 (45.13%), Postives = 76/113 (67.26%), Query Frame = 0
Query:   10 RVRSLSVCSRCADCGAPCADWASVAHGSFVCLNCAGQHRSLGMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRIGLYPWSTIQDKCEHPCLPLYRKHLAALADGEEPP 122
            R+R L+    CADC AP   WASV++GSF+CL+C+GQHR+LG+H++F RS+  D WT+  +R+ME GGN ++  F ++ G+     IQ K +     LYR+ + A+ +G EPP
Sbjct:   12 RLRELAGNKVCADCPAPNPQWASVSYGSFICLDCSGQHRALGVHLSFVRSITMDSWTDKQIRLMEKGGNDQVISFFQQRGIAKSVPIQQKYKTAEAELYRERIKAVVEGREPP 124          
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: A0A6H5K0I1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I1_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 6.980e-23
Identity = 45/66 (68.18%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   73 MEAGGNGRLAEFVRRIGLYPWSTIQDKCEHPCLPLYRKHLAALADGEEPPPISREVLENAVLAASG 138
            MEAGGN RLAEF RR+G+Y WST+++K  HPCLPLYR+ LAALA GE+PPPISRE LE A     G
Sbjct:    1 MEAGGNKRLAEFSRRVGVYRWSTMEEKYRHPCLPLYRRRLAALAHGEKPPPISREALEQARAGGRG 66          
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: A0A7S0IGQ4_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IGQ4_MICPS)

HSP 1 Score: 98.6 bits (244), Expect = 1.420e-22
Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 0
Query:   20 CADCGAPCADWASVAHGSFVCLNCAGQHRSLGMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRIGLYPWSTIQDKCEHPCLPLYRKHLAALADGEE 120
            CADC A   DWASV HG F+CLNC+G HRSLG+HV+F RS   D WT+   R+ME GGN R  +F  + GL+  +  ++K        YR  L A A+G+E
Sbjct:   40 CADCPARNPDWASVKHGIFICLNCSGIHRSLGVHVSFVRSATMDTWTKAEARMMEKGGNNRQRKFFDKYGLHNGTPHREKYNLQIAEAYRGKLKAEAEGKE 140          
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: D8LVQ4_BLAHO (Arf-GAP domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LVQ4_BLAHO)

HSP 1 Score: 103 bits (256), Expect = 4.030e-22
Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   20 CADCGAPCADWASVAHGSFVCLNCAGQHRSLGMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRIGLYPWSTIQDKCEHPCLPLYRKHLAALADGEEPP 122
            CADCGA    WASV++G FVCL C+GQHR LG+H++F RS+  D WTE  ++ M+ GGN ++ +F++  G+   S+I+ K       LYR+ +AA  +G EPP
Sbjct:   18 CADCGAARPQWASVSYGIFVCLECSGQHRGLGVHLSFVRSVQMDSWTEREIKAMQVGGNKQMNDFLQEHGVPKNSSIKKKYNSRAAALYREVIAAKIEGREPP 120          
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: C1E391_MICCC (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E391_MICCC)

HSP 1 Score: 96.3 bits (238), Expect = 4.310e-22
Identity = 47/97 (48.45%), Postives = 59/97 (60.82%), Query Frame = 0
Query:   20 CADCGAPCADWASVAHGSFVCLNCAGQHRSLGMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRIGLYPWSTIQDKCEHPCLPLYRKHLAALA 116
            CADC     DWASV HG F+CLNC+G HRSLG+HV+F RS   D WT+   R+ME GGN R  +F  + GL+  +  ++K  H     YR  L A A
Sbjct:   26 CADCPTRNPDWASVKHGIFICLNCSGIHRSLGVHVSFVRSATMDTWTQAEARMMEKGGNNRQRKFFDKYGLHNGTPHREKYNHQIAEAYRGKLKAEA 122          
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: A0A196SB56_BLAHN (ARF-GAP protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SB56_BLAHN)

HSP 1 Score: 100 bits (249), Expect = 4.730e-22
Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 0
Query:   20 CADCGAPCADWASVAHGSFVCLNCAGQHRSLGMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRIGLYPWSTIQDKCEHPCLPLYRKHLAALADGEEPP 122
            CADCGA    WASV +G+F+CL C+G+HR LG+H++F RS   D W+E  ++ M  GGN  L +F  +  +   +TI+ K   P   LYR+ + A  +G EPP
Sbjct:   21 CADCGAARPQWASVTYGTFICLECSGKHRGLGVHISFVRSAQMDSWSEKEIQAMRVGGNQNLNDFFAKYNIPKNATIKQKYNSPAAELYREIIKAKVEGREPP 123          
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: A0A7J7IJ61_9RHOD (Arf-GAP domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJ61_9RHOD)

HSP 1 Score: 100 bits (249), Expect = 1.940e-21
Identity = 61/172 (35.47%), Postives = 93/172 (54.07%), Query Frame = 0
Query:   19 RCADCGAPCADWASVAHGSFVCLNCAGQHRSLGMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRI-GLYPWSTIQ--DKCEHPCLPLYRKHLAALADGE---EPPPISREVLENAVLAASGEEASDLDDDKHDATSSSSLDSDEGGESTRVQLKNLIRNVSGGCGGI 184
            RCADCGA    WA+V +G+F+CL C+G+HR LG+HV+F RS++ D+W +  LR M+ GGN    EF+RR  G+ P   +    K   P   +Y + + ALA GE   +P P S   L+  +  + G  ++        ++ S+SL      +   +  +  I  VSGG G +
Sbjct:   34 RCADCGAHHPQWATVTYGTFICLECSGRHRGLGVHVSFVRSVSMDRWKDWELRHMQVGGNAAFVEFMRRFAGISPGGPVDIAAKYSSPAANVYAQRIRALARGEPWQDPAPSSMPSLQMQLQRSDGNGSAPAIPPGSHSSGSNSLQ-----QPMNLDWRERIHGVSGGNGAV 200          
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: A0A7S0DMQ5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DMQ5_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 2.590e-21
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   20 CADCGAPCADWASVAHGSFVCLNCAGQHRSLGMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRIGLYPWSTIQDKCEHPCLPLYRKHLAALADGEEP 121
            C DC      WASV++G+F+C+ C+G HRSLG+H++F RS+  D W    +  M  GGN RL EF+R+       +I+DK     L LYR++LAA+A GE P
Sbjct:   36 CMDCDRKHPQWASVSYGTFICIECSGVHRSLGVHISFVRSVTMDGWYPKQIAKMTNGGNKRLREFLRKQKFPSGISIKDKYHQKALELYRENLAAIAQGEAP 137          
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Match: A0A7S1ZJ84_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJ84_TRICV)

HSP 1 Score: 95.5 bits (236), Expect = 1.170e-20
Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 0
Query:   11 VRSLSVCSRCADCGAPCADWASVAHGSFVCLNCAGQHRSLGMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRIGLYPWSTIQDKCEHPCLPLYRKHLAALADGEEPP 122
            V+++    +CA+CG     WASV+ G+  CL C+G HRSLG+H++F RS+A D WT   L +M+AGGN +   ++   G+ P   I++K E P   LY++ L A  +G   P
Sbjct:   48 VKAIPGNDKCAECGMKQPQWASVSFGTIFCLECSGVHRSLGVHISFVRSIAMDSWTPQQLALMKAGGNDKCKAYLSSKGISPSLAIKEKYESPAAQLYKEVLKARVEGRPEP 159          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE09_ECTSI1.570e-6662.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9D8B9_9STRA2.390e-2445.13Arf-GAP domain-containing protein n=2 Tax=Monodops... [more]
A0A6H5K0I1_9PHAE6.980e-2368.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S0IGQ4_MICPS1.420e-2248.51Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
D8LVQ4_BLAHO4.030e-2246.60Arf-GAP domain-containing protein n=1 Tax=Blastocy... [more]
C1E391_MICCC4.310e-2248.45Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A196SB56_BLAHN4.730e-2243.69ARF-GAP protein n=1 Tax=Blastocystis sp. subtype 1... [more]
A0A7J7IJ61_9RHOD1.940e-2135.47Arf-GAP domain-containing protein n=1 Tax=Cyanidio... [more]
A0A7S0DMQ5_9EUKA2.590e-2145.10Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S1ZJ84_TRICV1.170e-2040.18Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 57..78
score: 34.33
coord: 36..53
score: 51.92
coord: 17..36
score: 41.9
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 5..121
e-value: 1.2E-18
score: 78.0
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 18..85
e-value: 6.9E-23
score: 81.0
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 5..84
score: 19.68
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 4..132
e-value: 2.0E-30
score: 107.5
NoneNo IPR availablePANTHERPTHR45686FAMILY NOT NAMEDcoord: 11..150
NoneNo IPR availablePANTHERPTHR45686:SF4ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM Hcoord: 11..150
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 11..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:203079..204553 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.731.1mRNA_C-linearis_contig101.731.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 203079..204797 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.731.1 ID=prot_C-linearis_contig101.731.1|Name=mRNA_C-linearis_contig101.731.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=209bp
MNYSSSWNPRVRSLSVCSRCADCGAPCADWASVAHGSFVCLNCAGQHRSL
GMHVTFTRSLATDKWTEGGLRIMEAGGNGRLAEFVRRIGLYPWSTIQDKC
EHPCLPLYRKHLAALADGEEPPPISREVLENAVLAASGEEASDLDDDKHD
ATSSSSLDSDEGGESTRVQLKNLIRNVSGGCGGIGHVLRRWSCNETAARR
ARAGGRGKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO