prot_C-linearis_contig101.713.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.713.1
Unique Nameprot_C-linearis_contig101.713.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length893
Homology
BLAST of mRNA_C-linearis_contig101.713.1 vs. uniprot
Match: D8LRB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRB1_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 3.800e-109
Identity = 310/855 (36.26%), Postives = 428/855 (50.06%), Query Frame = 0
Query:   13 ALVPLFVSAQQTFKVADCGDLFDNIPYPLSGATEIEFTASPISCQSNHHMIIDNDADVTLTTSLEAMELVNIRFEINSGSTLHVQLPNLQWQSVD------DDQETNGAALYVADGGAEAYFEEDVTFNGCAVP--QYAWGGVGGAIANMGGTLVFEKSASIVGTTDGGGLYSEGTVEFHGEALFQDNKNYN--DYNNGGGGIQM-MGGKMTFKAAASFIGNEVEEEANIGAWEGNIYYGGEGGAIHVSPENSADGMELVFEGPVLFRGNKAYEGAAIYLDSRWSEIAIIFQDLVTFEDN-EAPRSCG----GAIRITG-GLADFQAGVSATGNIAQDGGVFCVRDSDSTLRLAGPVSMTGNTALYQGGAIFNQGNVTMPEDADLSGNTAATCPSIKNWEEWESAYILDSWRNEPDGTVEFTDGSSYTGSSREVCYFGQPTE-STGSPLVLTPETADCDTLFTAGTDLGGNAYTVSAGSDLADYTYLVLDSRLVSALQFEVGIGDFDVSCATQSVIIITGGGEFTISSSASSLNMSNIRVEVTGHTALYMDIPELTMTGIDKSPIGGATHVDRDSSLEFLWDVKFLGNTLSYQTDY-FWLEYGGAALFNAGSVTFHQQAYFRENGQFEIE--GAYSTNNDGGAVLNLGDIQFMRKTKFWYNFNSRGGGXXXXXXXXXXXXXXXXVWRNNYVDYANAEEGSWVSGGHGAGLYNVGPSATTVFHSKAFFRDNVGGFRGGAVAANGADFTTDYFPDGANTITFEHEVKFKDNGFVP------KSEYGRGPDGGGAGLWVYLDATVDFQDRVVFRRNTAGNGGAIMNGGGRVQFASADLVDMVDNVSEQSCPDIMNYDT 840
            AL+ L  SA QT  V  C D     P  ++  T +E TA+ I+C +N H+ + + A V +T++L A +L N++F +  G+ L   +P L W SV+      + Q   GAA+ + + G+ A F EDVTF+ C +P   ++ G  G AIAN+G TL+F+ +A+   T DGG LY+ G + F  +A+F++NK+ N  D N  G G+   + G++ F  AA FI                                    +  VF+GPV+ RGN    GA +YL+       + F+DLVT EDN   P+  G    GAIR+      DFQAG++ATGNIA+DGG   V                                               +CP I+                  DG + F  G +YT +S E+CY G  T+ ST + LV   E  DC+            AY+ +A +   D   LV+D++ + +  F  G G    SC TQ ++ +TGGGE T++SSA+S  + N R EV+G + L +D+P LTMTGI +S  GGA  VD  SS+E + D+ FLGNTL+ Q D   W   GGAA+++AG+ TF+  A F  NGQ++ +  G   +N DGGAV N G + F RK  F  NFN     XXXXXXXXXXXXXXXX  +NN V  A                     S T +F   A F DNVGG  G A+A+ G+D   D   D  + +TFE + KFKDN  +P       SEY    D GG  L      +VDFQ+  VF+RN A  GGAI+N G     + A LV   DNV+  +C DI+N D+
Sbjct:   27 ALLFLGGSAAQTTTVGSCSDW----PSTITTDTVLELTAAEITCDTNTHVEVLDGATVEITSALAATKLNNVKFWVREGNFL-CSVPVLDWTSVETVANIHNVQVAGGAAMRI-EPGSTATFAEDVTFSACELPVEDFSGGSEGAAIANLG-TLLFQGTATFKDTPDGGALYTWGDLTFEKDAIFENNKSINGGDGNGSGAGLYSELDGEVLFMGAAYFIXXXXXXXXXXXXXXXXXXCN----------------LPTVFKGPVVVRGNSGMLGA-LYLNGD-----VTFEDLVTVEDNIMEPKLYGDRSEGAIRLGSYSNVDFQAGITATGNIAKDGGALYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCPGIEF----------------TDGEIVFDGGETYTSASTELCYLGTSTDGSTPTDLV---EEFDCE------------AYSATAPTS-NDLPILVIDTQEIKSWDFGSGGG---FSCPTQMIVYVTGGGELTVTSSAASTTIDNARFEVSGFSKLILDVPGLTMTGIYQSQAGGALFVDVGSSMEVMHDITFLGNTLAIQYDLGLWEARGGAAVYSAGTTTFYGTADFLGNGQYDADADGYEPSNEDGGAVYNSGSMTFARKGTFLDNFNXXXXXXXXXXXXXXXXXXXXXXXKNNSVGVAYTXXXXXXXXXXXXXXXXXDDS-TVLFSGLAIFSDNVGGTAGAALASKGSDPDDDDASDVDSKVTFEDKAKFKDNYIIPPRRPTSSSEYVVDEDKGGGALAALGVTSVDFQNTAVFKRNEAVKGGAILNSGSISFLSEAKLV-TADNVASSACADILNDDS 815          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRB1_ECTSI3.800e-10936.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..892
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.627

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:57614..69870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.713.1mRNA_C-linearis_contig101.713.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 57538..70488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.713.1 ID=prot_C-linearis_contig101.713.1|Name=mRNA_C-linearis_contig101.713.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=893bp
MKLPSSTAWKTLALVPLFVSAQQTFKVADCGDLFDNIPYPLSGATEIEFT
ASPISCQSNHHMIIDNDADVTLTTSLEAMELVNIRFEINSGSTLHVQLPN
LQWQSVDDDQETNGAALYVADGGAEAYFEEDVTFNGCAVPQYAWGGVGGA
IANMGGTLVFEKSASIVGTTDGGGLYSEGTVEFHGEALFQDNKNYNDYNN
GGGGIQMMGGKMTFKAAASFIGNEVEEEANIGAWEGNIYYGGEGGAIHVS
PENSADGMELVFEGPVLFRGNKAYEGAAIYLDSRWSEIAIIFQDLVTFED
NEAPRSCGGAIRITGGLADFQAGVSATGNIAQDGGVFCVRDSDSTLRLAG
PVSMTGNTALYQGGAIFNQGNVTMPEDADLSGNTAATCPSIKNWEEWESA
YILDSWRNEPDGTVEFTDGSSYTGSSREVCYFGQPTESTGSPLVLTPETA
DCDTLFTAGTDLGGNAYTVSAGSDLADYTYLVLDSRLVSALQFEVGIGDF
DVSCATQSVIIITGGGEFTISSSASSLNMSNIRVEVTGHTALYMDIPELT
MTGIDKSPIGGATHVDRDSSLEFLWDVKFLGNTLSYQTDYFWLEYGGAAL
FNAGSVTFHQQAYFRENGQFEIEGAYSTNNDGGAVLNLGDIQFMRKTKFW
YNFNSRGGGGGGIANAGSIEFHRRTVWRNNYVDYANAEEGSWVSGGHGAG
LYNVGPSATTVFHSKAFFRDNVGGFRGGAVAANGADFTTDYFPDGANTIT
FEHEVKFKDNGFVPKSEYGRGPDGGGAGLWVYLDATVDFQDRVVFRRNTA
GNGGAIMNGGGRVQFASADLVDMVDNVSEQSCPDIMNYDTELNRQENDSV
FGDINDPENTECGYDVCTFYVGEIAIGAAETIVGPAPEICEF*
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