prot_C-linearis_contig101.705.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.705.1
Unique Nameprot_C-linearis_contig101.705.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length79
Homology
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BLAST of mRNA_C-linearis_contig101.705.1 vs. uniprot
Match: D8LE05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE05_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.570e-23
Identity = 58/82 (70.73%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:    1 FNFVEYPPESKKLPSGTDIVKMMEERNAKRRAAAARAGVDAHLAAAGGA---PTSRTSDTTLDATAKVAPPATDSLREGDQT 79
            F FVEYPPESKKLPSG +IV+MMEER AKRR AA R+G+DAHLAAAG     PTSR +DTTLDATA V PP  D+ RE DQ+
Sbjct:   33 FKFVEYPPESKKLPSGKEIVEMMEEREAKRRTAATRSGMDAHLAAAGAVTRTPTSRRTDTTLDATATV-PPTPDASREVDQS 113
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE05_ECTSI2.570e-2370.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:11499..11994 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.705.1mRNA_C-linearis_contig101.705.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 11499..11994 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.705.1 ID=prot_C-linearis_contig101.705.1|Name=mRNA_C-linearis_contig101.705.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=79bp
FNFVEYPPESKKLPSGTDIVKMMEERNAKRRAAAARAGVDAHLAAAGGAP
TSRTSDTTLDATAKVAPPATDSLREGDQT
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