Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 162 |
| Cds size | 129 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927359.032041-CDS-C-linearis_contig101:504708..504761 | 1622927359.032041-CDS-C-linearis_contig101:504708..504761 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 504709..504761 - |
| 1690879651.2113354-CDS-C-linearis_contig101:504708..504761 | 1690879651.2113354-CDS-C-linearis_contig101:504708..504761 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 504709..504761 - |
| 1622927359.045366-CDS-C-linearis_contig101:504947..505023 | 1622927359.045366-CDS-C-linearis_contig101:504947..505023 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 504948..505023 - |
| 1690879651.220639-CDS-C-linearis_contig101:504947..505023 | 1690879651.220639-CDS-C-linearis_contig101:504947..505023 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig101 504948..505023 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927359.056534-UTR-C-linearis_contig101:505023..505054 | 1622927359.056534-UTR-C-linearis_contig101:505023..505054 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig101 505024..505054 - |
| 1690879651.2286205-UTR-C-linearis_contig101:505023..505054 | 1690879651.2286205-UTR-C-linearis_contig101:505023..505054 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig101 505024..505054 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig101.755.1 >prot_C-linearis_contig101.755.1 ID=prot_C-linearis_contig101.755.1|Name=mRNA_C-linearis_contig101.755.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=43bp
MEERGEDGERHSRARIHSATAKQRKGSRCEGRCQPDEEKPVEN back to topmRNA from alignment at C-linearis_contig101:504709..505054- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig101.755.1 ID=mRNA_C-linearis_contig101.755.1|Name=mRNA_C-linearis_contig101.755.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=346bp|location=Sequence derived from alignment at C-linearis_contig101:504709..505054- (Chordaria linearis ClinC8C monoicous)
ACGCGCCGGGGCAGGCCTTTGGGGAGGCGACATGGAAGAACGCGGAGAAG
ATGGTGAACGGCATAGTCGGGCACGGATACACTCTGCAACGGCGAAACAA
AGAAAAGGTAGGCGAGCGTGGGCGGCTTCAAAACTTAAAACCTCCTTGAA
CTGCTGGTGCTTGTTTGGTGCGGTCCTTTCGTCCTTTTGTGCGCGCACCT
GCATGTACCCACCATTGACGCACGCACCTTGGTGTCCACCATCACATGTA
CCCCACCATTGACATCGGAAATTACGTCTCACTGCCCGCCCAGGTTCACG
CTGTGAAGGACGATGCCAACCGGATGAGGAAAAACCGGTGGAGAAC back to topCoding sequence (CDS) from alignment at C-linearis_contig101:504709..505054- >mRNA_C-linearis_contig101.755.1 ID=mRNA_C-linearis_contig101.755.1|Name=mRNA_C-linearis_contig101.755.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=258bp|location=Sequence derived from alignment at C-linearis_contig101:504709..505054- (Chordaria linearis ClinC8C monoicous)
ATGGAAGAACGCGGAGAAGATGGTGAACGGCATAGTCGGGCACGGATACA
CTCTGCAACGGCGAAACAAAGAAAAGATGGAAGAACGCGGAGAAGATGGT
GAACGGCATAGTCGGGCACGGATACACTCTGCAACGGCGAAACAAAGAAA
AGGTTCACGCTGTGAAGGACGATGCCAACCGGATGAGGAAAAACCGGTGG
AGAACGTTCACGCTGTGAAGGACGATGCCAACCGGATGAGGAAAAACCGG
TGGAGAAC back to top
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